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List of works by Tom Vercauteren

A 30-Year Clinical and Magnetic Resonance Imaging Observational Study of Multiple Sclerosis and Clinically Isolated Syndromes

scientific article published on 22 November 2019

A Combined EM and Visual Tracking Probabilistic Model for Robust Mosaicking: Application to Fetoscopy

article

A Continuum Robot and Control Interface for Surgical Assist in Fetoscopic Interventions

scientific article published on March 2017

A Registration Approach to Endoscopic Laser Speckle Contrast Imaging for Intrauterine Visualisation of Placental Vessels

scientific article published in 2015

A Viterbi Approach to Topology Inference for Large Scale Endomicroscopy Video Mosaicing

A log-Euclidean and total variation based variational framework for computational sonography

A magnetic resonance multi-atlas for the neonatal rabbit brain

scientific article published on 14 June 2018

A mixed-reality surgical trainer with comprehensive sensing for fetal laser minimally invasive surgery

scientific article published on 27 July 2018

A smart atlas for endomicroscopy using automated video retrieval

scientific article

A system for biopsy site re-targeting with uncertainty in gastroenterology and oropharyngeal examinations

Accurate Small Deformation Exponential Approximant to Integrate Large Velocity Fields: Application to Image Registration

scientific article published in June 2016

Active Handheld Flexible Fetoscope–Design and Control Based on a Modified Generalized Prandtl-Ishlinski Model

scientific article published in July 2020

Adaptive Optimization of CSMA/CA MAC Protocols Based on Bayesian State Estimation

Adaptive Optimization of IEEE 802.11 DCF Based on Bayesian Estimation of the Number of Competing Terminals

Adversarial training with cycle consistency for unsupervised super-resolution in endomicroscopy

scientific article published on 02 February 2019

Aleatoric uncertainty estimation with test-time augmentation for medical image segmentation with convolutional neural networks

scientific article published on 07 February 2019

An automated framework for localization, segmentation and super-resolution reconstruction of fetal brain MRI

scientific article published on 06 November 2019

An image retrieval approach to setup difficulty levels in training systems for endomicroscopy diagnosis

Anatomically realistic ultrasound phantoms using gel wax with 3D printed moulds

scientific article published on 29 November 2017

Asymmetric Image-Template Registration

Automated postoperative muscle assessment of hip arthroplasty patients using multimodal imaging joint segmentation

scientific article published on 03 September 2019

Automatic Brain Tumor Segmentation Based on Cascaded Convolutional Neural Networks With Uncertainty Estimation

scientific article published on 13 August 2019

Automatic C-Plane Detection in Pelvic Floor Transperineal Volumetric Ultrasound

scientific article

Automatic Extraction of Hiatal Dimensions in 3-D Transperineal Pelvic Ultrasound Recordings

scientific article

Automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalizing neural network

scientific article published on 10 January 2018

Batch and Sequential Bayesian Estimators of the Number of Active Terminals in an IEEE 802.11 Network

scholarly article by Tom Vercauteren et al published February 2007 in IEEE Transactions on Signal Processing

Bilateral Weighted Adaptive Local Similarity Measure for Registration in Neurosurgery

Body wall force sensor for simulated minimally invasive surgery: Application to fetal surgery

Bruker2nifti: Magnetic Resonance Images converter from Bruker ParaVision to Nifti format

Building large mosaics of confocal edomicroscopic images using visual servoing

scientific article

CAI4CAI: The Rise of Contextual Artificial Intelligence in Computer Assisted Interventions

scientific article published on 23 October 2019

Calculating reservoir pressure with or without flow information: Similarity and algorithmic sensitivity at radial artery

Clinical Applications for Diffusion MRI and Tractography of Cranial Nerves Within the Posterior Fossa: A Systematic Review

scholarly article by Jonathan Shapey et al published 2019 in Frontiers in Neuroscience

Computer-assisted surgical planning and intraoperative guidance in fetal surgery: a systematic review

scientific article (publication date: December 2015)

Content-Based Retrieval in Endomicroscopy: Toward an Efficient Smart Atlas for Clinical Diagnosis

Corrigendum to "Intraoperative Ultrasound in Patients Undergoing Transsphenoidal Surgery for Pituitary Adenoma: Systematic Review" [World Neurosurgery 106 (2017) 680-685].

scientific article published on 27 October 2017

DT-REFinD: diffusion tensor registration with exact finite-strain differential

scientific article

DTI registration with exact finite-strain differential

Decentralized sigma-point information filters for target tracking in collaborative sensor networks

Deep Sequential Mosaicking of Fetoscopic Videos

scientific article published in 2019

Deep learning-based fetoscopic mosaicking for field-of-view expansion

scientific article published on 17 August 2020

Deep learning-based monocular placental pose estimation: towards collaborative robotics in fetoscopy

scientific article published on 30 April 2020

DeepIGeoS: A Deep Interactive Geodesic Framework for Medical Image Segmentation

scientific article published on 01 June 2018

DeepReg: a deep learning toolkit for medical image registration

scientific article published on 04 November 2020

Development and characterisation of a brain tumour mimicking protoporphyrin IX fluorescence phantom (Conference Presentation)

article

Development of an Alveolar Transbronchial Catheter for Concurrent Fiber Optics-Based Imaging and Fluid Delivery

article

Diffeomorphic demons using normalized mutual information, evaluation on multimodal brain MR images

Diffeomorphic demons: efficient non-parametric image registration

scientific article published on 7 November 2008

Dynamically Balanced Online Random Forests for Interactive Scribble-Based Segmentation

EP22.19: Investigating the effect of umbilical cord insertion site on placental perfusion

Early neuropathological and neurobehavioral consequences of preterm birth in a rabbit model

scientific article published on 05 March 2019

Effective deep learning training for single-image super-resolution in endomicroscopy exploiting video-registration-based reconstruction.

scientific article

Endomicroscopic image retrieval and classification using invariant visual features

Endomicroscopic video retrieval using mosaicing and visualwords

Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration

scientific article published on 13 January 2009

Evaluation of Haptic Feedback on Bimanually Teleoperated Laparoscopy for Endometriosis Surgery

scientific article published on 20 September 2018

Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge

scientific article

FetNet: a recurrent convolutional network for occlusion identification in fetoscopic videos

scientific article published on 29 April 2020

Fluidic actuation for intra-operative in situ imaging

Focusing light through multimode fibres using a digital micromirror device: a comparison study of non-holographic approaches

scientific article published on 01 May 2021

Forward-backward splitting in deformable image registration: A demons approach

Freehand Ultrasound Image Simulation with Spatially-Conditioned Generative Adversarial Networks

From a Disposable Ureteroscope to an Active Lightweight Fetoscope—Characterization and Usability Evaluation

From computer-assisted intervention research to clinical impact: The need for a holistic approach.

scientific article published on 15 June 2016

GIFT-Cloud: A data sharing and collaboration platform for medical imaging research

scientific article

GIFT-Grab: Real-time C++ and Python Multi-channel Video Capture, Processing and Encoding API

Gel wax-based tissue-mimicking phantoms for multispectral photoacoustic imaging.

scientific article

Generalised Dice Overlap as a Deep Learning Loss Function for Highly Unbalanced Segmentations

scholarly article by Carole H. Sudre et al published 2017 in Lecture Notes in Computer Science

Handheld Active Add-On Control Unit for a Cable-Driven Flexible Endoscope

scientific article published on 20 September 2019

Haptic Guidance Based on All-Optical Ultrasound Distance Sensing for Safer Minimally Invasive Fetal Surgery

Hierarchical Forecasting of Web Server Workload Using Sequential Monte Carlo Training

Hierarchical Forecasting of Web Server Workload Using Sequential Monte Carlo Training

High-resolution miniprobe-based confocal microscopy in combination with video mosaicing (with video).

scientific article

Human placental vasculature imaging using an LED-based photoacoustic/ultrasound imaging system

Imaging the human placental microcirculation with micro-focus computed tomography: Optimisation of tissue preparation and image acquisition.

scientific article published on 3 October 2017

Imitation learning for improved 3D PET/MR attenuation correction

scientific article

Improved MR to CT Synthesis for PET/MR Attenuation Correction Using Imitation Learning

scientific article

Improved Placental Parameter Estimation Using Data-Driven Bayesian Modelling

scientific article

Improved fetal blood oxygenation and placental estimated measurements of diffusion-weighted MRI using data-driven Bayesian modeling

scientific article published on 19 November 2019

In vivo imaging of the bronchial wall microstructure using fibered confocal fluorescence microscopy

scientific article

Insight into efficient image registration techniques and the demons algorithm

scientific article published in January 2007

Interactive Medical Image Segmentation Using Deep Learning With Image-Specific Fine Tuning

scholarly article by Guotai Wang et al published July 2018 in IEEE Transactions on Medical Imaging

Interventional Photoacoustic Imaging of the Human Placenta with Ultrasonic Tracking for Minimally Invasive Fetal Surgeries

scientific article published in October 2015

Intraoperative Organ Motion Models with an Ensemble of Conditional Generative Adversarial Networks

Intraoperative Ultrasound in Patients Undergoing Transsphoidal Surgery for Pituitary Adenoma: A Systematic Review

scientific article

Intraoperative multispectral and hyperspectral label-free imaging: A systematic review of in vivo clinical studies

scientific article published on 29 April 2019

Introducing Space and Time in Local Feature-Based Endomicroscopic Image Retrieval

Joint Multimodal Segmentation of Clinical CT and MR from Hip Arthroplasty Patients

Joint multiple target tracking and classification in collaborative sensor networks

Joint registration and synthesis using a probabilistic model for alignment of MRI and histological sections

Label-driven weakly-supervised learning for multimodal deformarle image registration

Learning semantic and visual similarity for endomicroscopy video retrieval

scientific article published on 16 February 2012

Learning task-optimal registration cost functions for localizing cytoarchitecture and function in the cerebral cortex

scientific article published on 07 June 2010

MRI Measurement of Placental Perfusion and Fetal Blood Oxygen Saturation in Normal Pregnancy and Placental Insufficiency

scientific article

MRI Measurement of Placental Perfusion and Oxygen Saturation in Early Onset Fetal Growth Restriction

scientific article published on 30 June 2020

Macro-Micro Multi-Arm Robot for Single-Port Access Surgery

scientific article published in November 2019

Manual segmentation versus semi-automated segmentation for quantifying vestibular schwannoma volume on MRI

scientific article published on 16 July 2020

Medical-grade Sterilizable Target for Fluid-immersed Fetoscope Optical Distortion Calibration

scientific article

Micro-CT and histological investigation of the spatial pattern of feto-placental vascular density

scientific article published on 29 September 2019

MicroCT to investigate the heterogeneity of villous vascular density in normal placentae

Minimally invasive photoacoustic imaging: Current status and future perspectives

scientific article published on 31 October 2019

Mosaicing of Confocal Microscopic Video Sequences: Larger Field of View and Still Higher Resolution!

Mosaicing of confocal microscopic in vivo soft tissue video sequences

Motion-Aware Mosaicing for Confocal Laser Endomicroscopy

Multi-scale spectrally resolved quantitative fluorescence imaging system: towards neurosurgical guidance in glioma resection

Multicolor probe-based confocal laser endomicroscopy: a new world for in vivo and real-time cellular imaging

article published in 2013

Multitarget Tracking and Classification in Collaborative Sensor Networks via Sequential Monte Carlo Methods

Music-of-light stethoscope: a demonstration of the photoacoustic effect

scientific article published on 7 June 2016

NiftyNet: a deep-learning platform for medical imaging.

scientific article published on 31 January 2018

Non-parametric diffeomorphic image registration with the demons algorithm

Novel 3D printing technology for direct fabrication of tissue-mimicking phantoms (Conference Presentation)

OP05.08: Novel placental evaluation using multimodal MRI

On the Compactness, Efficiency, and Representation of 3D Convolutional Networks: Brain Parcellation as a Pretext Task

scholarly article by Wenqi Li et al published 2017 in Lecture Notes in Computer Science

Online Bayesian Estimation of Hidden Markov Models with Unknown Transition Matrix and Applications to IEEE 802.11 Networks

Online blind calibration of non-uniform photodetectors: application to endomicroscopy

Optical Detection of Distal Lung Enzyme Activity in Human Inflammatory Lung Disease

scientific article published in 2021

Optimizing IEEE 802.11 DCF using Bayesian Estimators of the Network State

Patient-specific tissue-mimicking phantoms for photoacoustic and ultrasound imaging (Conference Presentation)

article published in 2018

Photoacoustic imaging of the human placental vasculature

scientific article published on 29 October 2019

Point-Spread-Function-Aware Slice-to-Volume Registration: Application to Upper Abdominal MRI Super-Resolution

Probabilistic visual and electromagnetic data fusion for robust drift-free sequential mosaicking: application to fetoscopy.

scientific article published on 22 February 2018

Pruning strategies for efficient online globally consistent mosaicking in fetoscopy

scientific article published on 01 July 2019

Publisher Correction: Early neuropathological and neurobehavioral consequences of preterm birth in a rabbit model

scientific article published on 13 November 2019

Quantifying the structure of the chorionic vascular tree with central and eccentric cord insertion

Quantitative analysis of the three dimensional fetoplacental vascular tree in normal, term placenta

REGION TRACKING ALGORITHMS ON LASER SCANNING DEVICES APPLIED TO CELL TRAFFIC ANALYSIS

scholarly article published 2007

Re-localisation of a biopsy site in endoscopic images and characterisation of its uncertainty

scientific article published on 2 December 2011

Real time autonomous video image registration for endomicroscopy: fighting the compromises

Real-Time Segmentation of Non-rigid Surgical Tools Based on Deep Learning and Tracking

scholarly article by Luis C. García-Peraza-Herrera et al published 2017 in Lecture Notes in Computer Science

Real-time mosaicing of fetoscopic videos using SIFT

article published in 2016

Refractive Structure-from-Motion Through a Flat Refractive Interface

Registration of MRI and iUS Data to Compensate Brain Shift Using a Symmetric Block-Matching Based Approach

article published in 2018

Reliability of MR Imaging–Based Posterior Fossa and Brain Stem Measurements in Open Spinal Dysraphism in the Era of Fetal Surgery

scientific article published on 27 December 2018

Reservoir pressure separation at brachial, carotid and radial arteries: A quantitative comparison and evaluation

Retrieval and registration of long-range overlapping frames for scalable mosaicking of in vivo fetoscopy

scientific article published on 15 March 2018

Retrieval evaluation and distance learning from perceived similarity between endomicroscopy videos

Robust mosaicing with correction of motion distortions and tissue deformations for in vivo fibered microscopy

scientific article published on 2 August 2006

Scalable Multimodal Convolutional Networks for Brain Tumour Segmentation

Scale Factor Point Spread Function Matching: Beyond Aliasing in Image Resampling

Scanning the surface of soft tissues with a micrometer precision thanks to endomicroscopy based visual servoing

Seeing through multimode fibers with real-valued intensity transmission matrices

scientific article published on 01 July 2020

Semi-automated Query Construction for Content-Based Endomicroscopy Video Retrieval

scientific article published on 01 January 2014

Separating fetal and maternal placenta circulations using multiparametric MRI

scientific article published on 21 September 2018

Separation of fetal and maternal circulations using multi-modal MRI

Slic-Seg: A minimally interactive segmentation of the placenta from sparse and motion-corrupted fetal MRI in multiple views.

scientific article published on 03 May 2016

Slic-Seg: Slice-by-Slice Segmentation Propagation of the Placenta in Fetal MRI Using One-Plane Scribbles and Online Learning

Software for automated classification of probe-based confocal laser endomicroscopy videos of colorectal polyps

scientific article

Spatial Regularisation based Reconstruction of Quantitative Fluorescence Imaging

Spherical demons: fast diffeomorphic landmark-free surface registration

scientific article

Spherical demons: fast surface registration

article by B. T. Thomas Yeo et al published 2008 in Lecture Notes in Computer Science

Strengths and Pitfalls of Whole-Heart Atlas-Based Segmentation in Congenital Heart Disease Patients

Super-resolution for upper abdominal MRI: Acquisition and post-processing protocol optimization using brain MRI control data and expert reader validation

scientific article published on 01 July 2019

Symmetric log-domain diffeomorphic Registration: a demons-based approach

Technical note: automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalising neural network

scholarly article published 13 March 2018

Technical note: probabilistic visual and electromagnetic data fusion for robust drift-free sequential mosaicking. Application to fetoscopy

article published in 2018

Template-Free Estimation of Intracranial Volume: A Preterm Birth Animal Model Study

The Bionic Clicker Mark I & II.

scientific article

The conversational position in endoscopic pituitary surgery

scientific article published on 4 December 2017

Three-dimensional printed ultrasound and photoacoustic training phantoms for vasculature access (Conference Presentation)

scientific article published on 24 April 2017

ToolNet: Holistically-nested real-time segmentation of robotic surgical tools

Towards computer-assisted TTTS: Laser ablation detection for workflow segmentation from fetoscopic video

Volumetric reconstruction from printed films: Enabling 30 year longitudinal analysis in MR neuroimaging.

scientific article published on 7 October 2017

Weakly-supervised convolutional neural networks for multimodal image registration

scholarly article by Yipeng Hu et al published October 2018 in Medical Image Analysis

Wide-field spectrally resolved quantitative fluorescence imaging system: toward neurosurgical guidance in glioma resection.

scientific article published in November 2017

Zero-Shot Super-Resolution With a Physically-Motivated Downsampling Kernel for Endomicroscopy

scientific article published in 2021

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