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List of works by Jan Dijkstra

A Bayesian approach to analyze energy balance data from lactating dairy cows

scientific article

A Model to Describe Growth Patterns of the Mammary Gland During Pregnancy and Lactation ⬇️

scientific article published on October 1, 1997

A comparison of the Schumacher with other functions for describing growth in pigs

article

A dynamic mechanistic model of lactic acid metabolism in the rumen

scientific article published on 22 February 2014

A general compartmental model for interpreting gas production profiles

article

A mechanistic model of small intestinal starch digestion and glucose uptake in the cow.

scientific article published on 29 March 2017

A modified rinsing method for the determination of the S, W–S and D + U fraction of protein and starch in feedstuff within the in situ technique ⬇️

scientific article published on March 11, 2013

A multi-level hierarchic Markov process with Bayesian updating for herd optimization and simulation in dairy cattle

scientific article published in December 2011

A new approach to estimate the in situ fractional degradation rate of organic matter and nitrogen in wheat yeast concentrates

scientific article published on 10 October 2014

Accumulation of trans C18:1 fatty acids in the rumen after dietary algal supplementation is associated with changes in the Butyrivibrio community

scientific article

Alternatives to Linear Analysis of Energy Balance Data from Lactating Dairy Cows ⬇️

scientific article published on September 1, 2003

An integrated mathematical model to evaluate nutrient partition in dairy cattle between the animal and its environment

article

An isotope dilution model for partitioning leucine uptake by the liver of the lactating dairy cow

scientific article published on 01 May 1999

An isotope dilution model for partitioning of phenylalanine and tyrosine uptake by the liver of lactating dairy cows.

scientific article

An isotope dilution model for partitioning phenylalanine and tyrosine uptake by the mammary gland of lactating dairy cows

scientific article

Anti-methanogenic effects of monensin in dairy and beef cattle: a meta-analysis

scientific article published on 13 June 2013

Application of a Mechanistic Model to Study Competitive Inhibition of Amino Acid Uptake by the Lactating Bovine Mammary Gland ⬇️

scientific article published on June 1, 1998

Application of the gas production technique to feed evaluation systems for ruminants

article

Are dietary strategies to mitigate enteric methane emission equally effective across dairy cattle, beef cattle, and sheep?

scientific article published on 10 May 2019

Assessment of nutritive value of cereal and legume straws based on chemical composition andin vitro digestibility

article

Bayesian analysis of energy balance data from growing cattle using parametric and non-parametric modelling

article

Bayesian mechanistic modeling of thermodynamically controlled volatile fatty acid, hydrogen and methane production in the bovine rumen

scientific article published on 08 August 2019

Causes of inaccurate prediction of volatile fatty acids by simulation models of rumen function in lactating cows

scientific article published on 01 December 1997

Changes in in vitro gas and methane production from rumen fluid from dairy cows during adaptation to feed additives in vivo.

scientific article published on 17 October 2016

Changes in rumen microbiota composition and in situ degradation kinetics during the dry period and early lactation as affected by rate of increase of concentrate allowance

scientific article

Changes in ruminal volatile fatty acid production and absorption rate during the dry period and early lactation as affected by rate of increase of concentrate allowance

scientific article published on 4 May 2016

Characterization of milk fatty acids based on genetic and herd parameters

scientific article published on 01 February 2012

Comparative analysis of gas production profiles obtained with buffalo and sheep ruminal fluid as the source of inoculum

article

Comparison between stearoyl‐CoA desaturase expression in milk somatic cells and in mammary tissue of lactating dairy cows ⬇️

scientific article published on February 28, 2012

Comparison of energy evaluation systems and a mechanistic model for milk production by dairy cattle offered fresh grass-based diets

article

Concentrations of n-3 and n-6 fatty acids in Dutch bovine milk fat and their contribution to human dietary intake.

scientific article published on 9 May 2013

Consequences of dietary energy source and energy level on energy balance, lactogenic hormones, and lactation curve characteristics of cows after a short or omitted dry period

scientific article published on 16 August 2017

Cost-effectiveness of feeding strategies to reduce greenhouse gas emissions from dairy farming.

scientific article published on 31 January 2014

Design, implementation and interpretation of in vitro batch culture experiments to assess enteric methane mitigation in ruminants—a review

article

Determination of energy and protein requirements for crossbred Holstein × Gyr preweaned dairy calves

scientific article published on 8 December 2016

Development and evaluation of a dynamic model of calcium and phosphorus flows in layers

scientific article published in March 2009

Diet effects on urine composition of cattle and N2O emissions.

scientific article published on June 2013

Dietary inclusion of diallyl disulfide, yucca powder, calcium fumarate, an extruded linseed product, or medium-chain fatty acids does not affect methane production in lactating dairy cows

scientific article published on 01 June 2011

Diurnal Dynamics of Gaseous and Dissolved Metabolites and Microbiota Composition in the Bovine Rumen

scientific article

Effect of dietary energy source on energy balance, production, metabolic disorders and reproduction in lactating dairy cattle.

scientific article

Effect of dietary nitrate level on enteric methane production, hydrogen emission, rumen fermentation, and nutrient digestibility in dairy cows

scientific article published on 25 May 2016

Effect of dietary starch or micro algae supplementation on rumen fermentation and milk fatty acid composition of dairy cows

scientific article published in December 2008

Effect of different levels of rapidly degradable carbohydrates calculated by a simple rumen model on performance of lactating dairy cows

scientific article published on 27 April 2017

Effect of feed-related farm characteristics on relative values of genetic traits in dairy cows to reduce greenhouse gas emissions along the chain

article published in 2015

Effect of glucogenic vs. lipogenic diets on energy balance, blood metabolites, and reproduction in primiparous and multiparous dairy cows in early lactation

scientific article published on 01 July 2007

Effect of high-sugar grasses on methane emissions simulated using a dynamic model.

scientific article published on January 2012

Effect of nitrogen fertilization rate and regrowth interval of grass herbage on methane emission of zero-grazing lactating dairy cows

scientific article published on 12 March 2015

Effect of nylon bag and protozoa on in vitro corn starch disappearance

scientific article published on 01 March 2008

Effect of roughage source and roughage to concentrate ratio on animal performance and rumen development in veal calves

scientific article published on 01 May 2007

Effect of sodium chloride intake on urine volume, urinary urea excretion, and milk urea concentration in lactating dairy cattle

scientific article published on 11 October 2012

Effect of supplemental concentrate during the dry period or early lactation on rumen epithelium gene and protein expression in dairy cattle during the transition period

scientific article

Effects of a combination of feed additives on methane production, diet digestibility, and animal performance in lactating dairy cows

scientific article published on 01 March 2011

Effects of an artificial hay aroma and compound feed formulation on feed intake pattern, rumen function and milk production in lactating dairy cows

scientific article published on 03 October 2019

Effects of chemically or technologically treated linseed products and docosahexaenoic acid addition to linseed oil on biohydrogenation of C18:3n-3 in vitro.

scientific article published on November 2010

Effects of dietary energy source on energy balance, metabolites and reproduction variables in dairy cows in early lactation.

scientific article published on 29 May 2007

Effects of dietary starch content and rate of fermentation on methane production in lactating dairy cows

scientific article published on 07 November 2014

Effects of feeding different linseed sources on omasal fatty acid flows and fatty acid profiles of plasma and milk fat in lactating dairy cows

scientific article published on 01 June 2012

Effects of feeding rapeseed oil, soybean oil, or linseed oil on stearoyl-CoA desaturase expression in the mammary gland of dairy cows

scientific article published on 01 February 2011

Effects of forage type, forage to concentrate ratio, and crushed linseed supplementation on milk fatty acid profile in lactating dairy cows

scientific article published in December 2011

Effects of grass silage quality and level of feed intake on enteric methane production in lactating dairy cows.

scientific article

Effects of lactic acid bacteria silage inoculation on methane emission and productivity of Holstein Friesian dairy cattle

scientific article published on 29 June 2016

Effects of nitrogen fertilisation rate and maturity of grass silage on methane emission by lactating dairy cows

scientific article published on 12 August 2015

Effects of phytase supplementation on phosphorus retention in broilers and layers: a meta-analysis

scientific article

Effects of raw milk and starter feed on intake and body composition of Holstein × Gyr male calves up to 64 days of age

article

Effects of rumen-undegradable protein on intake, performance, and mammary gland development in prepubertal and pubertal dairy heifers

scientific article published on 05 April 2018

Effects of short- and long-chain fatty acids on the expression of stearoyl-CoA desaturase and other lipogenic genes in bovine mammary epithelial cells.

scientific article published on 19 April 2013

Effects of varying dietary forage particle size in two concentrate levels on chewing activity, ruminal mat characteristics, and passage in dairy cows.

scientific article published in April 2007

Efficiency of fat deposition from non-starch polysaccharides, starch and unsaturated fat in pigs

scientific article published on 28 August 2009

Energy and nitrogen balance of dairy cattle as affected by provision of different essential amino acid profiles at the same metabolizable protein supply

scientific article published on 01 August 2019

Energy and nitrogen partitioning in dairy cows at low or high metabolizable protein levels is affected differently by postrumen glucogenic and lipogenic substrates

scientific article published on 24 October 2018

Energy requirements for pregnant dairy cows

scientific article published on 07 July 2020

Enteric methane production in lactating dairy cows with continuous feeding of essential oils or rotational feeding of essential oils and lauric acid.

scientific article published on 22 February 2017

Enteric methane production, rumen volatile fatty acid concentrations, and milk fatty acid composition in lactating Holstein-Friesian cows fed grass silage- or corn silage-based diets

scientific article published on 9 January 2015

Estimating the energetic cost of feeding excess dietary nitrogen to dairy cows

scientific article published on 12 July 2017

Estimation of the in situ degradation of the washout fraction of starch by using a modified in situ protocol and in vitro measurements

scientific article published on 29 May 2015

Estimation of the stoichiometry of volatile fatty acid production in the rumen of lactating cows.

scientific article published on 18 August 2005

Evaluation of models to predict the stoichiometry of volatile fatty acid profiles in rumen fluid of lactating Holstein cows

scientific article published in June 2011

Evaluation of the SF6 tracer technique for estimating methane emission rates with reference to dairy cows using a mechanistic model.

scientific article

Expression of genes related to energy metabolism and the unfolded protein response in dairy cow mammary cells is affected differently during dietary supplementation with energy from protein and fat

scientific article published on 15 May 2019

Feed and nitrogen efficiency are affected differently but milk lactose production is stimulated equally when isoenergetic protein and fat is supplemented in lactating dairy cow diets

scientific article published on 13 July 2018

Feeding nitrate and docosahexaenoic acid affects enteric methane production and milk fatty acid composition in lactating dairy cows

scientific article published on 25 November 2015

Further assessment of the protozoal contribution to the nutrition of the ruminant animal.

scientific article published on 19 December 2016

Genetic parameters for predicted methane production and potential for reducing enteric emissions through genomic selection ⬇️

scientific article published on December 1, 2011

Impact of subacute ruminal acidosis (SARA) adaptation and recovery on the density and diversity of bacteria in the rumen of dairy cows.

scientific article

Improving the prediction of methane production and representation of rumen fermentation for finishing beef cattle within a mechanistic model

article

In vitro gas and methane production of silages from whole-plant corn harvested at 4 different stages of maturity and a comparison with in vivo methane production.

scientific article published on 23 August 2017

Increasing harvest maturity of whole-plant corn silage reduces methane emission of lactating dairy cows

scientific article published on 21 October 2015

Influence of milk urea concentration on fractional urea disappearance rate from milk to blood plasma in dairy cows

scientific article published in May 2016

Interaction between dietary content of protein and sodium chloride on milk urea concentration, urinary urea excretion, renal recycling of urea, and urea transfer to the gastrointestinal tract in dairy cows.

scientific article published on 17 July 2013

Interpreting experimental data on egg production--applications of dynamic differential equations

scientific article

Invited review: Large-scale indirect measurements for enteric methane emissions in dairy cattle: A review of proxies and their potential for use in management and breeding decisions.

scientific article published on February 2017

Invited review: Nitrogen in ruminant nutrition: A review of measurement techniques

scientific article published on 25 April 2019

Letter to the Editor: Recovery test results as a prerequisite for publication of gaseous exchange measurements

scientific article published on 01 June 2018

Lignin composition is more important than content for maize stem cell wall degradation.

scientific article published on 21 August 2017

Linseed oil and DGAT1 K232A polymorphism: Effects on methane emission, energy and nitrogen metabolism, lactation performance, ruminal fermentation, and rumen microbial composition of Holstein-Friesian cows

scientific article

Mammary gland metabolite utilization in response to exogenous glucose or long-chain fatty acids at low and high metabolizable protein levels

scientific article published on 31 May 2019

Mammary gland utilization of amino acids and energy metabolites differs when dairy cow rations are isoenergetically supplemented with protein and fat

scientific article published on 26 December 2018

Meta-analysis of factors that affect the utilization efficiency of phosphorus in lactating dairy cows

scientific article published on 05 April 2013

Meta-analysis of relationships between enteric methane yield and milk fatty acid profile in dairy cattle

scientific article published on 11 September 2014

Methods to determine the relative value of genetic traits in dairy cows to reduce greenhouse gas emissions along the chain

scientific article published on 2 June 2014

Milk metabolome relates enteric methane emission to milk synthesis and energy metabolism pathways.

scientific article published on 25 May 2016

Milk urea concentration as an indicator of ammonia emission from dairy cow barn under restricted grazing

scientific article published on 01 January 2011

Modeling the adequacy of dietary fiber in dairy cows based on the responses of ruminal pH and milk fat production to composition of the diet.

scientific article published in May 2008

Modeling the distribution of ciliate protozoa in the reticulo-rumen using linear programming

scientific article published in January 2012

Modeling the efficiency of phosphorus utilization in growing pigs

scientific article published on 29 April 2011

Modelling of nutrient partitioning in growing pigs to predict their anatomical body composition. 2. Model evaluation

scientific article published on 01 October 2004

Modelling the implications of feeding strategy on rumen fermentation and functioning of the rumen wall

article

Morphological adaptation of rumen papillae during the dry period and early lactation as affected by rate of increase of concentrate allowance

scientific article published on 21 January 2016

Multi-criteria evaluation of dairy cattle feed resources and animal characteristics for nutritive and environmental impacts

scientific article published on 24 August 2018

Multivariate and univariate analysis of energy balance data from lactating dairy cows

scientific article

Natural antibodies related to energy balance in early lactation dairy cows.

scientific article published in December 2007

Nitrate and sulfate: Effective alternative hydrogen sinks for mitigation of ruminal methane production in sheep

scientific article published on 01 December 2010

Nutritional and Environmental Effects on Ammonia Emissions from Dairy Cattle Housing: A Meta-Analysis

scientific article published on July 2016

On the analysis of Canadian Holstein dairy cow lactation curves using standard growth functions

scientific article published on 31 January 2015

Passage kinetics of 13C-labeled corn silage components through the gastrointestinal tract of dairy cows.

scientific article

Passage kinetics of concentrates in dairy cows measured with carbon stable isotopes

scientific article published on 09 September 2013

Passage of stable isotope-labeled grass silage fiber and fiber-bound protein through the gastrointestinal tract of dairy cows

scientific article

Persistency of methane mitigation by dietary nitrate supplementation in dairy cows

scientific article

Physiology, regulation and multifunctional activity of the gut wall: a rationale for multicompartmental modelling.

scientific article

Predicting enteric methane emission of dairy cows with milk Fourier-transform infrared spectra and gas chromatography-based milk fatty acid profiles

scientific article published on 15 March 2018

Predicting the profile of nutrients available for absorption: from nutrient requirement to animal response and environmental impact.

scientific article

Prediction of enteric methane production, yield and intensity in dairy cattle using an intercontinental database.

scientific article published on 16 February 2018

Prediction of methane emission from lactating dairy cows using milk fatty acids and mid-infrared spectroscopy

scientific article published on 21 March 2016

Prediction of nitrogen use in dairy cattle: a multivariate Bayesian approach

article

Prediction of portal and hepatic blood flow from intake level data in cattle.

scientific article

Prediction of urinary nitrogen and urinary urea nitrogen excretion by lactating dairy cattle in northwestern Europe and North America: a meta-analysis

scientific article published on 9 May 2013

Recovery test results as a prerequisite for publication of gaseous exchange measurements

scientific article published on 11 October 2017

Relationships between chemical composition and in vitro gas production parameters of maize leaves and stems

scientific article published on 03 October 2019

Relationships between methane emission of Holstein Friesian dairy cows and fatty acids, volatile metabolites and non-volatile metabolites in milk.

scientific article published on 21 February 2017

Review of current in vivo measurement techniques for quantifying enteric methane emission from ruminants

article

Review: Rumen sensors: data and interpretation for key rumen metabolic processes

scientific article published on 01 March 2020

Review: Synergy between mechanistic modelling and data-driven models for modern animal production systems in the era of big data

scientific article published on 06 March 2020

Rumen stoichiometric models and their contribution and challenges in predicting enteric methane production

article

Ruminal pH regulation and nutritional consequences of low pH

article

Seasonal variation in the Dutch bovine raw milk composition.

scientific article published in October 2009

Short communication: Antimethanogenic effects of 3-nitrooxypropanol depend on supplementation dose, dietary fiber content, and cattle type

scientific article published on 25 July 2018

Short communication: Relationship between lysine/methionine ratios and glucose levels and their effects on casein synthesis via activation of the mechanistic target of rapamycin signaling pathway in bovine mammary epithelial cells

scientific article published on 17 July 2019

Short communication: The effect of linseed oil and DGAT1 K232A polymorphism on the methane emission prediction potential of milk fatty acids

scientific article published on 15 March 2018

Short communication: Using diurnal patterns of (13)C enrichment of CO2 to evaluate the effects of nitrate and docosahexaenoic acid on fiber degradation in the rumen of lactating dairy cows

scientific article published on 22 June 2016

Short communication: assessing urea transport from milk to blood in dairy cows

scientific article published on 19 September 2012

Simulation of the dynamics of protozoa in the rumen

scientific article published in November 1994

Simulation of the effects of diet on the contribution of rumen protozoa to degradation of fibre in the rumen

scientific article published in November 1995

Some methodological and analytical considerations regarding application of the gas production technique

article

Stable isotope labeled n-alkanes to assess digesta passage kinetics through the digestive tract of ruminants

scientific article published on 04 October 2013

Stable isotope-labelled feed nutrients to assess nutrient-specific feed passage kinetics in ruminants

scientific article

Statistical evaluation of mathematical models for microbial growth.

scientific article published on November 2004

Sulphur levels in saliva as an estimation of sulphur status in cattle: a validation study

scientific article published on 22 October 2012

Symposium review: Uncertainties in enteric methane inventories, measurement techniques, and prediction models.

scientific article published on 18 April 2018

Technical note: Evaluation of an ear-attached movement sensor to record cow feeding behavior and activity.

scientific article published on 13 March 2014

Technical options for the mitigation of direct methane and nitrous oxide emissions from livestock: a review

scientific article published on June 2013

The Contribution of Mathematical Modeling to Understanding Dynamic Aspects of Rumen Metabolism.

scientific article

The effect of dry period length and postpartum level of concentrate on milk production, energy balance, and plasma metabolites of dairy cows across the dry period and in early lactation.

scientific article published on 27 April 2017

The effect of high-sugar grass on predicted nitrogen excretion and milk yield simulated using a dynamic model

article

The effect of silage and concentrate type on intake behavior, rumen function, and milk production in dairy cows in early and late lactation.

scientific article published in December 2008

The effect of supplemental concentrate fed during the dry period on morphological and functional aspects of rumen adaptation in dairy cattle during the dry period and early lactation

scientific article published on 16 November 2016

The effects of a ration change from a total mixed ration to pasture on rumen fermentation, volatile fatty acid absorption characteristics, and morphology of dairy cows

scientific article published on 18 February 2016

The relationship between milk metabolome and methane emission of Holstein Friesian dairy cows: Metabolic interpretation and prediction potential.

scientific article published on 28 December 2017

Thermodynamic Driving Force of Hydrogen on Rumen Microbial Metabolism: A Theoretical Investigation

scientific article

Udder health of dairy cows fed different dietary energy levels after a short or no dry period without use of dry cow antibiotics

scientific article published on 14 February 2018

δ 13C as a marker to study digesta passage kinetics in ruminants: a combined in vivo and in vitro study.

scientific article published on 5 December 2012

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