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List of works by Thomas Bocklitz

A Machine Learning-Based Raman Spectroscopic Assay for the Identification of Burkholderia mallei and Related Species

scientific article published on 10 December 2019

A comprehensive study of classification methods for medical diagnosis

A manual and an automatic TERS based virus discrimination

scientific article published on March 2015

A new calibration concept for a reproducible quantitative detection based on SERS measurements in a microfluidic device demonstrated on the model analyte adenine

scientific article

A study of Docetaxel-induced effects in MCF-7 cells by means of Raman microspectroscopy

scientific article published on 8 March 2012

Analysis of the cytochrome distribution via linear and nonlinear Raman spectroscopy

article

Automatic label‐free detection of breast cancer using nonlinear multimodal imaging and the convolutional neural network ResNet50 ⬇️

scholarly article

Beyond endoscopic assessment in inflammatory bowel disease: real-time histology of disease activity by non-linear multimodal imaging

scientific article published on 13 July 2016

Biochemical Analysis of Leukocytes after In Vitro and In Vivo Activation with Bacterial and Fungal Pathogens Using Raman Spectroscopy

scientific article published in 2021

Checking and Improving Calibration of Raman Spectra using Chemometric Approaches

scientific article published in 2011

Classification of inflammatory bowel diseases by means of Raman spectroscopic imaging of epithelium cells

scientific article published in July 2012

Combined fiber probe for fluorescence lifetime and Raman spectroscopy

scientific article published on 21 June 2015

Comparability of Raman Spectroscopic Configurations: A Large Scale Cross-Laboratory Study

scientific article published on 21 November 2020

Comparative two- and three-dimensional analysis of nanoparticle localization in different cell types by Raman spectroscopic imaging

article

Comparing Raman and fluorescence lifetime spectroscopy from human atherosclerotic lesions using a bimodal probe

scientific article

Comparison of denoising tools for the reconstruction of nonlinear multimodal images

scientific article published in 2023

Computational tissue staining of non-linear multimodal imaging using supervised and unsupervised deep learning

scientific article published in 2021

Convenient detection of E. coli in Ringer's solution.

scientific article

Correction of mosaicking artefacts in multimodal images caused by uneven illumination

Correction of mosaicking artifacts in multimodal images caused by uneven illumination

Deep learning a boon for biophotonics?

scientific article published on 13 March 2020

Deep learning as phase retrieval tool for CARS spectra

scientific article published on 01 July 2020

Deep learning for 'artefact' removal in infrared spectroscopy

scientific article published on 24 June 2020

Deeper understanding of biological tissue: quantitative correlation of MALDI-TOF and Raman imaging.

scientific article

Demonstration of Carbon Catabolite Repression in Naphthalene Degrading Soil Bacteria via Raman Spectroscopy Based Stable Isotope Probing

scientific article published on 15 June 2016

Do You Get What You See? Understanding Molecular Self-Healing

scientific article published on 20 December 2017

Extended Multiplicative Signal Correction Based Model Transfer for Raman Spectroscopy in Biological Applications

scientific article published on 02 August 2018

Fast differentiation of SIRS and sepsis from blood plasma of ICU patients using Raman spectroscopy

scientific article published on 17 March 2014

Fluorescence upconversion by triplet-triplet annihilation in all-organic poly(methacrylate)-terpolymers

scientific article published on 01 February 2020

From bulk to single-cell classification of the filamentous growing Streptomyces bacteria by means of Raman spectroscopy

scientific article published on 01 October 2011

Fully convolutional networks in multimodal nonlinear microscopy images for automated detection of head and neck carcinoma: A pilot study

scientific article published on 12 December 2018

Fusion of MALDI Spectrometric Imaging and Raman Spectroscopic Data for the Analysis of Biological Samples

scientific article published on 16 July 2018

How to pre-process Raman spectra for reliable and stable models?

scientific article published on 31 July 2011

Identification and differentiation of single cells from peripheral blood by Raman spectroscopic imaging.

scientific article published in August 2010

Identification of primary tumors of brain metastases by Raman imaging and support vector machines

Image Processing in Biomedical Diagnosis

article

In situ spectroelectrochemical and theoretical study on the oxidation of a 4H-imidazole-ruthenium dye adsorbed on nanocrystalline TiO2 thin film electrodes

scientific article published on 19 October 2015

Kinetic-Model-Free Analysis of Transient Absorption Spectra Enabled by 2D Correlation Analysis

scientific article published on 23 April 2021

LOC-SERS: A Promising Closed System for the Identification of Mycobacteria

scientific article published on 21 July 2016

Lab-on-a-Chip-Surface Enhanced Raman Scattering Combined with the Standard Addition Method: Toward the Quantification of Nitroxoline in Spiked Human Urine Samples

scientific article

Label-Free Molecular Imaging of Biological Cells and Tissues by Linear and Nonlinear Raman Spectroscopic Approaches

scientific article published on 15 November 2016

Mo1508 Differentiation of Colonic Adenomas and Carcinomas From Normal Epithelial Cells in a p53-Ko-Carcinogen-Induced Colorectal Tumor Mouse Model by Means of Raman Spectroscopic Imaging

Model transfer for Raman-spectroscopy-based bacterial classification

Molecular self-healing mechanisms between C60-fullerene and anthracene unveiled by Raman and two-dimensional correlation spectroscopy

scientific article published on 21 June 2016

Multimodal Imaging Spectroscopy of Tissue

scientific article published on 11 June 2015

Multimodal image analysis in tissue diagnostics for skin melanoma

scholarly article by Shuxia Guo et al published 16 November 2017 in Journal of Chemometrics

Multimodal nonlinear microscopy of head and neck carcinoma - toward surgery assisting frozen section analysis

scientific article published on 21 April 2016

Multiplex coherent anti-Stokes Raman scattering microspectroscopy of brain tissue with higher ranking data classification for biomedical imaging

scientific article

Nondestructive molecular imaging by Raman spectroscopy <i>vs.</i> marker detection by MALDI IMS for an early diagnosis of HCC

scientific article published on 14 December 2020

Nonlinear Multimodal Imaging Characteristics of Early Septic Liver Injury in a Mouse Model of Peritonitis

scientific article published on 13 August 2019

Novel workflow for combining Raman spectroscopy and MALDI-MSI for tissue based studies

scientific article published on 15 September 2015

Online-calibration for reliable and robust lab-on-a-chip surface enhanced Raman spectroscopy measurement in a liquid/liquid segmented flow

scientific article published on 30 September 2011

Optimization of Raman-spectrum baseline correction in biological application

scientific article published on 24 February 2016

PC 2D-COS: A Principal Component Base Approach to Two-Dimensional Correlation Spectroscopy

scientific article published on 19 February 2020

Predictive Modeling of Antibiotic Susceptibility in <i>E. Coli</i> Strains Using the U-Net Network and One-Class Classification

scientific article published in 2020

Probing Protein Secondary Structure Influence on Active Centers with Hetero Two-Dimensional Correlation (Resonance) Raman Spectroscopy: A Demonstration on Cytochrome C

scientific article published in August 2021

Pseudo-HE images derived from CARS/TPEF/SHG multimodal imaging in combination with Raman-spectroscopy as a pathological screening tool

scientific article

Quantitative SERS studies by combining LOC-SERS with the standard addition method

scientific article published on 22 September 2015

Raman Based Molecular Imaging and Analytics: A Magic Bullet for Biomedical Applications!?

scientific article

Raman Spectroscopy Follows Time-Dependent Changes in T Lymphocytes Isolated from Spleen of Endotoxemic Mice

scientific article published on 08 February 2019

Raman spectroscopic detection of Nickel impact on single Streptomyces cells - possible bioindicators for heavy metal contamination

scholarly article by Angela Walter et al published 22 December 2011 in Journal of Raman Spectroscopy

Raman spectroscopic detection of physiology changes in plasmid-bearing Escherichia coli with and without antibiotic treatment

scientific article

Raman spectroscopic imaging for the real-time detection of chemical changes associated with docetaxel exposure

scientific article published on 30 January 2013

Raman spectroscopic investigation of the human liver stem cell line HepaRG

Raman spectroscopy-based identification of toxoid vaccine products

scientific article published on 04 October 2018

Raman-Spectroscopy Based Cell Identification on a Microhole Array Chip

Rapid detection of the aspergillosis biomarker triacetylfusarinine C using interference-enhanced Raman spectroscopy

scientific article published on 14 March 2020

Recursive feature elimination in Raman spectra with support vector machines

Richard G. Brereton: Chemometrics: data driven extraction for science, 2nd ed

scientific article published on 01 May 2019

Sample size planning for classification models

scientific article

Sample size planning for multivariate data: a Raman spectroscopy based example

scientific article published on 17 October 2018

Seamless stitching of tile scan microscope images.

scientific article published on 18 March 2015

Separation of CARS image contributions with a Gaussian mixture model

scientific article

Shedding light on host niches: label-free in situ detection of Mycobacterium gordonae via carotenoids in macrophages by Raman microspectroscopy

scientific article

Simulation of Transportation and Storage and Their Influence on Raman Spectra of Bacteria

scientific article published on 21 October 2019

Single cell analysis in native tissue: Quantification of the retinoid content of hepatic stellate cells

scientific article published on 11 April 2016

Single particle analysis of herpes simplex virus: comparing the dimensions of one and the same virions via atomic force and scanning electron microscopy

scientific article published on 6 April 2016

Single virus detection by means of atomic force microscopy in combination with advanced image analysis

scientific article

Spatial resolution of tip-enhanced Raman spectroscopy – DFT assessment of the chemical effect

article by Federico Latorre et al published 2016 in Nanoscale

Spatiotemporal Organization of Biofilm Matrix Revealed by Confocal Raman Mapping Integrated with Non-negative Matrix Factorization Analysis

scientific article published on 09 December 2019

Spectral reconstruction for shifted-excitation Raman difference spectroscopy (SERDS)

Spectrometer calibration protocol for Raman spectra recorded with different excitation wavelengths

article

Surface enhanced Raman spectroscopy-detection of the uptake of mannose-modified nanoparticles by macrophages in vitro: A model for detection of vulnerable atherosclerotic plaques

scientific article published on 31 July 2018

Surface-enhanced Raman spectroscopy and microfluidic platforms: challenges, solutions and potential applications

scientific article

Systematic evaluation of the biological variance within the Raman based colorectal tissue diagnostics

scientific article published on 20 December 2015

The application of UV resonance Raman spectroscopy for the differentiation of clinically relevant Candida species

scholarly article by Anja Silge et al published 30 June 2018 in Analytical and Bioanalytical Chemistry

The interaction of an amino-modified ZrO2 nanomaterial with macrophages-an in situ investigation by Raman microspectroscopy

scientific article published on 22 June 2016

Toward a spectroscopic hemogram: Raman spectroscopic differentiation of the two most abundant leukocytes from peripheral blood

scientific article published on 8 June 2012

Toward food analytics: fast estimation of lycopene and β-carotene content in tomatoes based on surface enhanced Raman spectroscopy (SERS).

scientific article

Toward improving fine needle aspiration cytology by applying Raman microspectroscopy

scientific article published on April 2013

Towards Raman spectroscopy of urine as screening tool

scientific article published on 19 November 2019

Towards SERS based applications in food analytics: lipophilic sensor layers for the detection of Sudan III in food matrices

scientific article

Towards a quantitative SERS approach--online monitoring of analytes in a microfluidic system with isotope-edited internal standards

scientific article

Towards an improvement of model transferability for Raman spectroscopy in biological applications

scientific article published in July 2017

Towards detection and identification of circulating tumour cells using Raman spectroscopy.

scientific article published on 13 October 2010

Tracking heavy water (D2O) incorporation for identifying and sorting active microbial cells

scientific article

Tumour cell identification by means of Raman spectroscopy in combination with optical traps and microfluidic environments

scientific article

Two-dimensional Raman correlation spectroscopy reveals molecular structural changes during temperature-induced self-healing in polymers based on the Diels-Alder reaction.

scientific article published on 8 June 2015

UV-Raman Spectroscopic Identification of Fungal Spores Important for Respiratory Diseases

scientific article published on 16 July 2018

Vibrational spectroscopy as a powerful tool for follow-up immunoadsorption therapy treatment of dilated cardiomyopathy - a case report

scientific article published on 29 November 2019

WE-ASCA: The Weighted-Effect ASCA for Analyzing Unbalanced Multifactorial Designs-A Raman Spectra-Based Example

scientific article published on 25 December 2020

ZrO2 nanoparticles labeled via a native protein corona: detection by fluorescence microscopy and Raman microspectroscopy in rat lungs

scientific article

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