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List of works by Robert P Davey

A Galaxy-based training resource for single-cell RNA-sequencing quality control and analyses

scientific article published on 01 December 2019

Aequatus: An open-source homology browser

An Open Science Peer Review Oath

scientific article published on 9 January 2015

An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations

scientific article

An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations

article

An open science peer review oath

scientific article, version 1

COPO - Managing sample metadata for biodiversity: considerations from the Darwin Tree of Life project

scientific article published in 2023

COPO: a metadata platform for brokering FAIR data in the life sciences

scientific article published on 02 June 2020

CerealsDB 3.0: expansion of resources and data integration

scientific article

CropSight: a scalable and open-source information management system for distributed plant phenotyping and IoT-based crop management

article

Data management and best practice for plant science

scientific article

Data management challenges for artificial intelligence in plant and agricultural research

scientific article published in 2023

Developing data interoperability using standards: A wheat community use case

scientific article published in 2017

Developing data interoperability using standards: A wheat community use case.

scientific article published on 16 October 2017

GeneSeqToFamily: a Galaxy workflow to find gene families based on the Ensembl Compara GeneTrees

scientific article published on 7 February 2018

ISA API: An open platform for interoperable life science experimental metadata

scientific article published on 16 September 2021

Leaf LIMS: A Flexible Laboratory Information Management System with a Synthetic Biology Focus

scientific article published on 6 September 2017

MPP: a microarray-to-phylogeny pipeline for analysis of gene and marker content datasets

scientific article published on 24 March 2007

Managing sample metadata for biodiversity: considerations from the Darwin Tree of Life project

scientific article published in 2022

NanoOK: multi-reference alignment analysis of nanopore sequencing data, quality and error profiles

scientific article

Population genomics of domestic and wild yeasts

scientific article

Prevalence and Dynamics of Ribosomal DNA Micro-heterogeneity Are Linked to Population History in Two Contrasting Yeast Species

scientific article

Recommendations for connecting molecular sequence and biodiversity research infrastructures through ELIXIR

scientific article published in 2022

Repetitive sequence variation and dynamics in the ribosomal DNA array of Saccharomyces cerevisiae as revealed by whole-genome resequencing

scientific article published on 13 January 2009

Ribosomal DNA sequence heterogeneity reflects intraspecies phylogenies and predicts genome structure in two contrasting yeast species

scientific article

Sequencing quality assessment tools to enable data-driven informatics for high throughput genomics

scientific article

StatsDB: platform-agnostic storage and understanding of next generation sequencing run metrics

scientific article

TURNIP: tracking unresolved nucleotide polymorphisms in large hard-to-assemble regions of repetitive DNA sequence

scientific article published on 5 October 2010

The 2015 Bioinformatics Open Source Conference (BOSC 2015)

scientific article

wigExplorer, a BioJS component to visualise wig data.

scientific article

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