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List of works by Dominik Schwudke

A Current Encyclopedia of Bioinformatics Tools, Data Formats and Resources for Mass Spectrometry Lipidomics

scientific article published in 2022

A saposin deficiency model in Drosophila: Lysosomal storage, progressive neurodegeneration and sensory physiological decline

scientific article

Ablation of cholesterol biosynthesis in neural stem cells increases their VEGF expression and angiogenesis but causes neuron apoptosis.

scholarly article

Attachment of phosphorylcholine residues to pneumococcal teichoic acids and modification of substitution patterns by the phosphorylcholine esterase

scientific article published on 15 May 2018

Bacterial medium-chain 3-hydroxy fatty acid metabolites trigger immunity in Arabidopsis plants

scientific article published on 01 April 2019

Bdellovibrio bacteriovorus strains produce a novel major outer membrane protein during predacious growth in the periplasm of prey bacteria

scientific article

Blocking IL-10 receptor signaling ameliorates Mycobacterium tuberculosis infection during influenza-induced exacerbation.

scientific article published on 18 April 2019

Bottom-up shotgun lipidomics by higher energy collisional dissociation on LTQ Orbitrap mass spectrometers

scientific article published on 27 June 2011

Broad-host-range Yersinia phage PY100: genome sequence, proteome analysis of virions, and DNA packaging strategy.

scientific article published on 26 October 2007

Ceramides And Stress Signalling Intersect With Autophagic Defects In Neurodegenerative Drosophila blue cheese (bchs) Mutants

scientific article

Changes in visceral adipose tissue plasma membrane lipid composition in old rats are associated with adipocyte hypertrophy with aging.

scientific article published on 16 April 2018

Characterization of outer membrane protein fractions of Bdellovibrionales

scientific article

Co-Inactivation of GlnR and CodY Regulators Impacts Pneumococcal Cell Wall Physiology

scientific article published on 22 April 2015

Complex lipid metabolic remodeling is required for efficient hepatitis C virus replication

scientific article published on 06 June 2018

Constitutive formation of caveolae in a bacterium

scientific article published on August 2012

Glycosphingolipid requirements for endosome-to-Golgi transport of Shiga toxin.

scientific article

Inactivation of Bacteria by γ-Irradiation to Investigate the Interaction with Antimicrobial Peptides

scientific article published on 18 October 2019

Inhibition of cytosolic phospholipase A2α impairs an early step of coronavirus replication in cell culture

scientific article published on 22 November 2017

Introducing the Lipidomics Minimal Reporting Checklist ⬇️

scientific article published on 8 August 2022

LET-767 is required for the production of branched chain and long chain fatty acids in Caenorhabditis elegans

scientific article

Laser capture microdissection coupled with on-column extraction LC-MS(n) enables lipidomics of fluorescently labeled Drosophila neurons

scientific article

Lipid A structural characterization from the LPS of the Siberian psychro-tolerant Psychrobacter arcticus 273-4 grown at low temperature

scientific article published on 20 August 2018

Lipid Analysis of Airway Epithelial Cells for Studying Respiratory Diseases

scientific article

Lipid extraction by methyl-tert-butyl ether for high-throughput lipidomics

scientific article published on 16 February 2008

Lipid metabolic perturbation is an early-onset phenotype in adult spinster mutants: a Drosophila model for lysosomal storage disorders

scientific article

LipidXplorer: Software for Quantitative Shotgun Lipidomics Compatible with Multiple Mass Spectrometry Platforms.

scientific article published on 15 October 2013

LipidXplorer: a software for consensual cross-platform lipidomics

scientific article

Lipidation of Pneumococcal Antigens Leads to Improved Immunogenicity and Protection

scientific article published on 17 June 2020

Lipidome of narrow-band ultraviolet B irradiated keratinocytes shows apoptotic hallmarks

scientific article published on 01 August 2010

Lipidomes of lung cancer and tumour-free lung tissues reveal distinct molecular signatures for cancer differentiation, age, inflammation, and pulmonary emphysema

scientific article published on 11 September 2017

Lipidomics informatics for life-science

scientific article

Lipoteichoic acid deficiency permits normal growth but impairs virulence of Streptococcus pneumoniae.

scientific article published on 12 December 2017

Lipoteichoic acid of Streptococcus oralis Uo5: a novel biochemical structure comprising an unusual phosphorylcholine substitution pattern compared to Streptococcus pneumoniae.

scientific article

Lupus nephritis is linked to disease-activity associated expansions and immunity to a gut commensal

scientific article published on 19 February 2019

Maradolipids: Diacyltrehalose Glycolipids Specific to Dauer Larva in Caenorhabditis elegans

scientific article published on 01 December 2010

Occurrence of an unusual hopanoid-containing lipid A among lipopolysaccharides from Bradyrhizobium species

scientific article

PLD3 and spinocerebellar ataxia

scientific article published on 01 November 2018

Perspective for Precision Medicine for Tuberculosis

scientific article published on 08 October 2020

Phosphatidylinositol 4-phosphate and phosphatidylinositol 3-phosphate regulate phagolysosome biogenesis

scientific article

Predatory mechanisms of Bdellovibrio and like organisms

scientific article published on February 2007

Quantification of Phosphatidylinositol Phosphate Species in Purified Membranes.

scientific article published on 5 December 2016

Shotgun Lipidomics Approach for Clinical Samples

scientific article published in January 2018

Shotgun Lipidomics on High Resolution Mass Spectrometers ⬇️

scientific article published on September 1, 2011

Shotgun lipidomics by tandem mass spectrometry under data-dependent acquisition control

scientific article

Software-aided quality control of parallel reaction monitoring based quantitation of lipid mediators

scientific article published on 09 February 2018

Structural analysis and immunostimulatory potency of lipoteichoic acids isolated from three serotype 2 strains

scientific article published on 08 June 2018

Structural studies of the lipopolysaccharide from the fish pathogen Aeromonas veronii strain Bs19, serotype O16.

scientific article published on 07 March 2014

Structure of the pneumococcal l,d-carboxypeptidase DacB and pathophysiological effects of disabled cell wall hydrolases DacA and DacB

scientific article published in September 2014

Sub-Lineage Specific Phenolic Glycolipid Patterns in the <i>Mycobacterium tuberculosis</i> Complex Lineage 1

scientific article published on 08 March 2022

Substrate structure-activity relationship reveals a limited lipopolysaccharide chemotype range for intestinal alkaline phosphatase

scientific article published on 08 November 2019

Survival strategies of a sterol auxotroph

scientific article

Taxonomic studies of predatory bdellovibrios based on 16S rRNA analysis, ribotyping and the hit locus and characterization of isolates from the gut of animals

scientific article published on 01 November 2001

The LUX Score: A Metric for Lipidome Homology

scientific article

The Leukotriene B4 and its Receptor BLT1 Act as Critical Drivers of Neutrophil Recruitment in Murine Bullous Pemphigoid-Like Epidermolysis Bullosa Acquisita

scientific article published on 17 January 2017

The interaction of Prussian blue and dissolved hexacyanoferrate ions with goethite (alpha-FeOOH) studied to assess the chemical stability and physical mobility of Prussian blue in soils

scientific article published in July 2001

The obligate predatory Bdellovibrio bacteriovorus possesses a neutral lipid A containing alpha-D-Mannoses that replace phosphate residues: similarities and differences between the lipid As and the lipopolysaccharides of the wild type strain B. [...]

scientific article

Top-down lipidomic screens by multivariate analysis of high-resolution survey mass spectra

scientific article published on 03 May 2007

Total Synthesis of Five Lipoteichoic acids of Clostridium difficile.

scientific article

Transcriptional activity of the host-interaction locus and a putative pilin gene of Bdellovibrio bacteriovorus in the predatory life cycle

scientific article published on 29 September 2005

Unusual Lipid A from a Cold-Adapted Bacterium: Detailed Structural Characterization

scientific article published on 26 June 2017

siRNA screening reveals JNK2 as an evolutionary conserved regulator of triglyceride homeostasis

scientific article published on 08 July 2008

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