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List of works by Marcelo Ribeiro-Alves

: A Bespoke Cloud-Based Interface for RNA-seq Differential Expression Modeling and Analysis

scientific article published on 14 May 2019

Application of Venn's diagram in the diagnosis of pleural tuberculosis using IFN-γ, IP-10 and adenosine deaminase

scientific article published in PLoS ONE

Assessing respondent-driven sampling: A simulation study across different networks

Assessment of drug resistance related genes as candidate markers for treatment outcome prediction of cutaneous leishmaniasis in Brazil.

scientific article published on 12 February 2013

Association between MBL2 haplotypes and dengue severity in children from Rio de Janeiro, Brazil.

scientific article published on 23 May 2019

Candidatus Liberibacter americanus induces significant reprogramming of the transcriptome of the susceptible citrus genotype.

scientific article

Citrus leprosis virus C Infection Results in Hypersensitive-Like Response, Suppression of the JA/ET Plant Defense Pathway and Promotion of the Colonization of Its Mite Vector

scientific article

Clinical and genetic markers associated with tuberculosis, HIV-1 infection, and TB/HIV-immune reconstitution inflammatory syndrome outcomes

scientific article published on 20 January 2020

Comparative genome analysis of Phyllosticta citricarpa and Phyllosticta capitalensis, two fungi species that share the same host

scientific article published on 05 July 2019

Decreased Circulating Levels of APRIL: Questioning Its Role in Diabetes

scientific article published on 15 October 2015

Development of algorithms to estimate EQ-5D and derive health utilities from WHOQOL-HIV Bref: a mapping study

scientific article published on 25 May 2020

Differential Expression of microRNAs in Thymic Epithelial Cells from Trypanosoma cruzi Acutely Infected Mice: Putative Role in Thymic Atrophy

scientific article

Effects of Resveratrol Supplementation in Nrf2 and NF-κB Expressions in Nondialyzed Chronic Kidney Disease Patients: A Randomized, Double-Blind, Placebo-Controlled, Crossover Clinical Trial.

scientific article published on 11 August 2016

Evaluation of qPCR-based assays for leprosy diagnosis directly in clinical specimens

scientific article

Functional Feeding Group composition and attributes: evaluation of freshwater ecosystems in Atlantic Forest, Brazil

scientific article published on 16 June 2021

GeNNet: an integrated platform for unifying scientific workflows and graph databases for transcriptome data analysis

scientific article published on 05 July 2017

Gene expression profiling specifies chemokine, mitochondrial and lipid metabolism signatures in leprosy

scientific article

Genetic modulation during thymocyte development an integrative approach based on microarray meta-analysis

article

Global gene expression of Poncirus trifoliata, Citrus sunki and their hybrids under infection of Phytophthora parasitica

scientific article

HAM/TSP-derived HTLV-1-infected T cell lines promote morphological and functional changes in human astrocytes cell lines: possible role in the enhanced T cells recruitment into Central Nervous System

scientific article

HTLV-1-infected thymic epithelial cells convey the virus to CD4+ T lymphocytes.

scientific article published on 14 August 2017

IFNG +874 T>A single nucleotide polymorphism is associated with leprosy among Brazilians

article

ITGA6 gene silencing by RNA interference modulates the expression of a large number of cell migration-related genes in human thymic epithelial cells

scientific article

Identification of Active Sarcoidosis Using Chitotriosidase and Angiotensin-Converting Enzyme

scientific article published on 19 March 2019

Increased expression of CDKN1A/p21 in HIV-1 controllers is correlated with upregulation of ZC3H12A/MCPIP1

scientific article published on 02 July 2020

Interruption of persistent exposure to leprosy combined or not with recent BCG vaccination enhances the response to Mycobacterium leprae specific antigens

scientific article

Killer cell immunoglobulin-like receptor (KIR) gene diversity in a population naturally exposed to malaria in Porto Velho, Northern Brazil.

scientific article published on 6 February 2015

Making a Better Home: Modulation of Plant Defensive Response by Mites

article

Metabonomics reveals drastic changes in anti-inflammatory/pro-resolving polyunsaturated fatty acids-derived lipid mediators in leprosy disease

scientific article (publication date: 2013)

MicroRNAs 145 and 148a Are Upregulated During Congenital Zika Virus Infection

scientific article published on 01 January 2019

Modulation of genes related to specific metabolic pathways in response to cytosolic ascorbate peroxidase knockdown in rice plants

scientific article published on 12 June 2012

Natural avirulent Shigella boydii strain in the Brazilian Amazon lacks major virulence genes and present Type II, Type III and Type VI Secretion Systems

article

Neutrophil extracellular trap-enriched supernatants carry microRNAs able to modulate TNF-α production by macrophages

scientific article published on 17 February 2020

Parasite load induces progressive spleen architecture breakage and impairs cytokine mRNA expression in Leishmania infantum-naturally infected dogs

scientific article (publication date: 2015)

Plasmatic Levels of IL-18, IP-10, and Activated CD8+ T Cells Are Potential Biomarkers to Identify HIV-1 Elite Controllers With a True Functional Cure Profile

scientific article published on 11 July 2018

Population Genetic Analysis Reveals a High Genetic Diversity in the Brazilian Cryptococcus gattii VGII Population and Shifts the Global Origin from the Amazon Rainforest to the Semi-arid Desert in the Northeast of Brazil

scientific article

Pre-miR-146a (rs2910164 G>C) single nucleotide polymorphism is genetically and functionally associated with leprosy

scientific article (publication date: September 2014)

Predominance of Th1 Immune Response in Pleural Effusion of Patients with Tuberculosis among Other Exudative Etiologies

scientific article published on 23 December 2019

Proviral Quasispecies Diversity Is Not Associated With Virologic Breakthrough or CD4 T Cell Loss in HIV-1 Elite Controllers

article

RNA interference-mediated knockdown of CD49e (α5 integrin chain) in human thymic epithelial cells modulates the expression of multiple genes and decreases thymocyte adhesion

scientific article

Reference genes for accurate transcript normalization in citrus genotypes under different experimental conditions

scientific article

Reprogramming of Small Noncoding RNA Populations in Peripheral Blood Reveals Host Biomarkers for Latent and Active Mycobacterium tuberculosis Infection

scientific article published on 03 December 2019

STING-Dependent 2'-5' Oligoadenylate Synthetase-Like Production Is Required for Intracellular Mycobacterium leprae Survival

scientific article

Short-term responses of soybean roots to individual and combinatorial effects of elevated [CO2] and water deficit

scientific article published on 21 December 2018

Single-Nucleotide Polymorphisms in NOD1, RIPK2, MICB, PLCE1, TNF, and IKBKE Genes Associated with Symptomatic Dengue in Children from Colombia

article

Small interference ITGA6 gene targeting in the human thymic epithelium differentially regulates the expression of immunological synapse-related genes

scientific article published on 11 May 2017

Statins increase rifampin mycobactericidal effect

scientific article

Superiority of Interferon Gamma Assay Over Tuberculin Skin Test for Latent Tuberculosis in Inflammatory Bowel Disease Patients in Brazil

scientific article published on 23 January 2019

Synthetic Antigens Derived from Plasmodium falciparum Sporozoite, Liver, and Blood Stages: Naturally Acquired Immune Response and Human Leukocyte Antigen Associations in Individuals Living in a Brazilian Endemic Area

scientific article published on 18 September 2017

Systemic Inflammation in Severe Obese Patients Undergoing Surgery for Obesity and Weight-Related Diseases

scientific article published in March 2018

TNF -308G>A single nucleotide polymorphism is associated with leprosy among Brazilians: a genetic epidemiology assessment, meta-analysis, and functional study.

scientific article

Targeted gene expression profiling in Leishmania braziliensis and Leishmania guyanensis parasites isolated from Brazilian patients with different antimonial treatment outcomes

scientific article published on 15 May 2010

The Men Who Have Sex with Men HIV Care Cascade in Rio de Janeiro, Brazil

scientific article

The embryonic development of Schistosoma mansoni eggs: proposal for a new staging system.

scientific article published on 5 May 2009

Transcriptional memory contributes to drought tolerance in coffee (Coffea canephora) plants

article

Transcriptional responses of Arabidopsis thaliana to oil contamination

article

Transcriptome analysis of Gossypium hirsutum flower buds infested by cotton boll weevil (Anthonomus grandis) larvae

scientific article

Transcriptomic Biomarkers for Tuberculosis: Evaluation of DOCK9. EPHA4, and NPC2 mRNA Expression in Peripheral Blood

scientific article published on 25 October 2016

Treatment with dimethyl fumarate reduces the formation and rupture of intracranial aneurysms: Role of Nrf2 activation

scientific article published on 20 June 2019

Ultra-sensitive detection of M. leprae: DNA extraction and PCR assays

scientific article published on 26 May 2020

Using ANOVA to analyse thalidomide’s molecular mechanisms in human PBMC microarrays

Whole blood profiling of leprosy type 1(reversal) reactions highlights prominence of innate immune response genes

article

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