List of works - Francisco J Prado-Prado

2D MI-DRAGON: a new predictor for protein-ligands interactions and theoretic-experimental studies of US FDA drug-target network, oxoisoaporphine inhibitors for MAO-A and human parasite proteins

scientific article published in October 2011

3D MI-DRAGON: new model for the reconstruction of US FDA drug- target network and theoretical-experimental studies of inhibitors of rasagiline derivatives for AChE.

scientific article published in January 2012

ANN multiplexing model of drugs effect on macrophages; theoretical and flow cytometry study on the cytotoxicity of the anti-microbial drug G1 in spleen.

scientific article

Complex network spectral moments for ATCUN motif DNA cleavage: first predictive study on proteins of human pathogen parasites.

scientific article published in November 2009

Editorial: QSAR models for computer-aided drug design and molecular docking for disorders of the central nervous system and other diseases

scientific article published on 01 January 2012

Entropy model for multiplex drug-target interaction endpoints of drug immunotoxicity.

scientific article published in January 2013

From QSAR models of drugs to complex networks: state-of-art review and introduction of new Markov-spectral moments indices

scientific article

Galvez-Markov network transferability indices: review of classic theory and new model for perturbations in metabolic reactions.

scientific article

LIBP-Pred: web server for lipid binding proteins using structural network parameters; PDB mining of human cancer biomarkers and drug targets in parasites and bacteria

scientific article published on 10 January 2012

MIND-BEST: Web server for drugs and target discovery; design, synthesis, and assay of MAO-B inhibitors and theoretical-experimental study of G3PDH protein from Trichomonas gallinae.

scientific article

MISS-Prot: web server for self/non-self discrimination of protein residue networks in parasites; theory and experiments in Fasciola peptides and Anisakis allergens.

scientific article

Model for high-throughput screening of drug immunotoxicity--study of the anti-microbial G1 over peritoneal macrophages using flow cytometry.

scientific article published on 22 November 2013

Multi-target spectral moment QSAR versus ANN for antiparasitic drugs against different parasite species.

scientific article published on 6 February 2010

Multi-target spectral moment: QSAR for antifungal drugs vs. different fungi species

article

Multi-target spectral moment: QSAR for antiviral drugs vs. different viral species

article

Multi-target spectral moments for QSAR and Complex Networks study of antibacterial drugs.

scientific article published on 24 June 2009

NL MIND-BEST: a web server for ligands and proteins discovery--theoretic-experimental study of proteins of Giardia lamblia and new compounds active against Plasmodium falciparum

scientific article

New Markov-Shannon Entropy models to assess connectivity quality in complex networks: from molecular to cellular pathway, Parasite-Host, Neural, Industry, and Legal-Social networks.

scientific article published on 25 October 2011

Patents of bio-active compounds based on computer-aided drug discovery techniques

scientific article published on January 2013

Predicting antimicrobial drugs and targets with the MARCH-INSIDE approach.

scientific article published on January 2008

Predicting drugs and proteins in parasite infections with topological indices of complex networks: theoretical backgrounds, applications, and legal issues

scientific article published on January 2010

Prediction of enzyme classes from 3D structure: a general model and examples of experimental-theoretic scoring of peptide mass fingerprints of Leishmania proteins.

scientific article published in September 2009

Prediction of multi-target networks of neuroprotective compounds with entropy indices and synthesis, assay, and theoretical study of new asymmetric 1,2-rasagiline carbamates

scientific article published on 24 September 2014

Protein Graphs in Cancer Prediction

QSAR for RNases and theoretic-experimental study of molecular diversity on peptide mass fingerprints of a new Leishmania infantum protein

scientific article published on 4 July 2009

Review of Theoretical Prediction Models for Organic Extract Metabolites, Effect of Drying Temperature on Smooth Muscle Relaxing Activity Induced by Organic Extracts Specially Cecropia Obtusifolia Portal and Web Server Predictors of Drug-Protein Inte

scientific article

Review of synthesis, biological assay and QSAR studies of β-secretase inhibitors.

scientific article published on December 2011

Review of theoretical studies for prediction of neurodegenerative inhibitors.

scientific article published on June 2012

The Kynurenine Pathway in the Acute and Chronic Phases of Cerebral Ischemia.

scientific article published on 23 September 2014

Theoretical study of GSK-3α: neural networks QSAR studies for the design of new inhibitors using 2D descriptors.

scientific article published on 7 July 2011

Trypano-PPI: a web server for prediction of unique targets in trypanosome proteome by using electrostatic parameters of protein-protein interactions.

scientific article published in February 2010

Unified QSAR & network-based computational chemistry approach to antimicrobials. II. Multiple distance and triadic census analysis of antiparasitic drugs complex networks.

scientific article published in January 2010

Unified QSAR and network-based computational chemistry approach to antimicrobials, part 1: multispecies activity models for antifungals

scientific article published on 01 March 2008

Unified QSAR approach to antimicrobials. 4. Multi-target QSAR modeling and comparative multi-distance study of the giant components of antiviral drug-drug complex networks.

scientific article published on 6 December 2008

Unified QSAR approach to antimicrobials. Part 2: predicting activity against more than 90 different species in order to halt antibacterial resistance.

scientific article published on 21 October 2006

Unified QSAR approach to antimicrobials. Part 3: first multi-tasking QSAR model for input-coded prediction, structural back-projection, and complex networks clustering of antiprotozoal compounds.

scientific article published on 29 April 2008

Unify QSAR approach to antimicrobials. Part 1: predicting antifungal activity against different species.

scientific article published on 8 June 2006

Using entropy of drug and protein graphs to predict FDA drug-target network: theoretic-experimental study of MAO inhibitors and hemoglobin peptides from Fasciola hepatica.

scientific article

List of works by Francisco J Prado-Prado

2D MI-DRAGON: a new predictor for protein-ligands interactions and theoretic-experimental studies of US FDA drug-target network, oxoisoaporphine inhibitors for MAO-A and human parasite proteins

3D MI-DRAGON: new model for the reconstruction of US FDA drug- target network and theoretical-experimental studies of inhibitors of rasagiline derivatives for AChE.

ANN multiplexing model of drugs effect on macrophages; theoretical and flow cytometry study on the cytotoxicity of the anti-microbial drug G1 in spleen.

Complex network spectral moments for ATCUN motif DNA cleavage: first predictive study on proteins of human pathogen parasites.

Editorial: QSAR models for computer-aided drug design and molecular docking for disorders of the central nervous system and other diseases

Entropy model for multiplex drug-target interaction endpoints of drug immunotoxicity.

From QSAR models of drugs to complex networks: state-of-art review and introduction of new Markov-spectral moments indices

Galvez-Markov network transferability indices: review of classic theory and new model for perturbations in metabolic reactions.

LIBP-Pred: web server for lipid binding proteins using structural network parameters; PDB mining of human cancer biomarkers and drug targets in parasites and bacteria

MIND-BEST: Web server for drugs and target discovery; design, synthesis, and assay of MAO-B inhibitors and theoretical-experimental study of G3PDH protein from Trichomonas gallinae.

MISS-Prot: web server for self/non-self discrimination of protein residue networks in parasites; theory and experiments in Fasciola peptides and Anisakis allergens.

Model for high-throughput screening of drug immunotoxicity--study of the anti-microbial G1 over peritoneal macrophages using flow cytometry.

Multi-target spectral moment QSAR versus ANN for antiparasitic drugs against different parasite species.

Multi-target spectral moment: QSAR for antifungal drugs vs. different fungi species

Multi-target spectral moment: QSAR for antiviral drugs vs. different viral species

Multi-target spectral moments for QSAR and Complex Networks study of antibacterial drugs.

NL MIND-BEST: a web server for ligands and proteins discovery--theoretic-experimental study of proteins of Giardia lamblia and new compounds active against Plasmodium falciparum

New Markov-Shannon Entropy models to assess connectivity quality in complex networks: from molecular to cellular pathway, Parasite-Host, Neural, Industry, and Legal-Social networks.

Patents of bio-active compounds based on computer-aided drug discovery techniques

Predicting antimicrobial drugs and targets with the MARCH-INSIDE approach.

Predicting drugs and proteins in parasite infections with topological indices of complex networks: theoretical backgrounds, applications, and legal issues

Prediction of enzyme classes from 3D structure: a general model and examples of experimental-theoretic scoring of peptide mass fingerprints of Leishmania proteins.

Prediction of multi-target networks of neuroprotective compounds with entropy indices and synthesis, assay, and theoretical study of new asymmetric 1,2-rasagiline carbamates

Protein Graphs in Cancer Prediction

QSAR for RNases and theoretic-experimental study of molecular diversity on peptide mass fingerprints of a new Leishmania infantum protein

Review of Theoretical Prediction Models for Organic Extract Metabolites, Effect of Drying Temperature on Smooth Muscle Relaxing Activity Induced by Organic Extracts Specially Cecropia Obtusifolia Portal and Web Server Predictors of Drug-Protein Inte

Review of synthesis, biological assay and QSAR studies of β-secretase inhibitors.

Review of theoretical studies for prediction of neurodegenerative inhibitors.

The Kynurenine Pathway in the Acute and Chronic Phases of Cerebral Ischemia.

Theoretical study of GSK-3α: neural networks QSAR studies for the design of new inhibitors using 2D descriptors.

Trypano-PPI: a web server for prediction of unique targets in trypanosome proteome by using electrostatic parameters of protein-protein interactions.

Unified QSAR & network-based computational chemistry approach to antimicrobials. II. Multiple distance and triadic census analysis of antiparasitic drugs complex networks.

Unified QSAR and network-based computational chemistry approach to antimicrobials, part 1: multispecies activity models for antifungals

Unified QSAR approach to antimicrobials. 4. Multi-target QSAR modeling and comparative multi-distance study of the giant components of antiviral drug-drug complex networks.

Unified QSAR approach to antimicrobials. Part 2: predicting activity against more than 90 different species in order to halt antibacterial resistance.

Unified QSAR approach to antimicrobials. Part 3: first multi-tasking QSAR model for input-coded prediction, structural back-projection, and complex networks clustering of antiprotozoal compounds.

Unify QSAR approach to antimicrobials. Part 1: predicting antifungal activity against different species.

Using entropy of drug and protein graphs to predict FDA drug-target network: theoretic-experimental study of MAO inhibitors and hemoglobin peptides from Fasciola hepatica.