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List of works by Hidenori Nishihara

A SINE-derived element constitutes a unique modular enhancer for mammalian diencephalic Fgf8

scientific article

A mammalian conserved element derived from SINE displays enhancer properties recapitulating Satb2 expression in early-born callosal projection neurons

scientific article

A retroposon analysis of Afrotherian phylogeny

scientific article

Acquisition of endonuclease specificity during evolution of L1 retrotransposon

scientific article published on 30 June 2007

Ancient DNA reveals multiple origins and migration waves of extinct Japanese brown bear lineages

scientific article published in 2021

Ancient SINEs from African endemic mammals

scientific article

B chromosomes have a functional effect on female sex determination in Lake Victoria cichlid fishes

scientific article

Characterization and evolutionary landscape of AmnSINE1 in Amniota genomes.

scientific article published on 24 December 2008

Characterization of a novel SINE superfamily from invertebrates: "Ceph-SINEs" from the genomes of squids and cuttlefish

scientific article published on 12 November 2009

Coelacanth genomes reveal signatures for evolutionary transition from water to land

scientific article (publication date: October 2013)

Coordinately Co-opted Multiple Transposable Elements Constitute an Enhancer for wnt5a Expression in the Mammalian Secondary Palate

scientific journal article

Determining the Position of Storks on the Phylogenetic Tree of Waterbirds by Retroposon Insertion Analysis

scientific article

Emergence of mammals by emergency: exaptation.

scientific article

Evolutionary Gain of Dbx1 Expression Drives Subplate Identity in the Cerebral Cortex

scientific article published on 01 October 2019

Evolutionary Origin of OwlRep, a Megasatellite DNA Associated with Adaptation of Owl Monkeys to Nocturnal Lifestyle.

scientific article published on 26 December 2017

Extremely slow rate of evolution in the HOX cluster revealed by comparison between Tanzanian and Indonesian coelacanths

scientific article

Hamster PIWI proteins bind to piRNAs with stage-specific size variations during oocyte maturation

scientific article published on 01 March 2021

Identification of four Engrailed genes in the Japanese lamprey, Lethenteron japonicum

scientific article published in June 2008

MetaSINEs: Broad Distribution of a Novel SINE Superfamily in Animals

scientific article published on 12 February 2016

MyrSINEs: A novel SINE family in the anteater genomes

article

Newly discovered young CORE-SINEs in marsupial genomes

scientific article published on 12 October 2007

Phylogenetic analysis of proteins involved in the stringent response in plant cells

scientific article published on 16 March 2017

Phylogeny of galactolipid synthase homologs together with their enzymatic analyses revealed a possible origin and divergence time for photosynthetic membrane biogenesis.

scientific article published on 30 December 2011

Placental Mammals Acquired Functional Sequences in NRK for Regulating the CK2-PTEN-AKT Pathway and Placental Cell Proliferation

scientific article published on 01 February 2022

Possible involvement of SINEs in mammalian-specific brain formation

scholarly article

Resolving the Phylogenetic Position of Coelacanth: The Closest Relative Is Not Always the Most Appropriate Outgroup

scientific article

Retroposon analysis and recent geological data suggest near-simultaneous divergence of the three superorders of mammals

scientific article (publication date: 31 March 2009)

Reverse evolution in RH1 for adaptation of cichlids to water depth in Lake Tanganyika.

scientific article

Rooting the eutherian tree: the power and pitfalls of phylogenomics

scientific article (publication date: 2007)

Support for Lungfish as the Closest Relative of Tetrapods by Using Slowly Evolving Ray-Finned Fish as the Outgroup

scientific article

The complete mitochondrial genomes of deep-sea squid (Bathyteuthis abyssicola), bob-tail squid (Semirossia patagonica) and four giant cuttlefish (Sepia apama, S. latimanus, S. lycidas and S. pharaonis), and their application to the phylogenetic anal

scientific article published on 26 June 2013

The evolution of two partner LINE/SINE families and a full-length chromodomain-containing Ty3/Gypsy LTR element in the first reptilian genome of Anolis carolinensis.

scientific article published on 14 December 2008

The genomic substrate for adaptive radiation in African cichlid fish

scientific article

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