List of works - Florence Jaffrézic

A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis

scientific article

A hierarchical poisson log-normal model for network inference from RNA sequencing data

scientific article

A model selection criterion for model-based clustering of annotated gene expression data

scientific article

A whole genome Bayesian scan for adaptive genetic divergence in West African cattle

scientific article

An empirical Bayesian method for estimating biological networks from temporal microarray data

scientific article

Analysis of a simulated microarray dataset: comparison of methods for data normalisation and detection of differential expression (open access publication).

scientific article

Analysis of porcine MHC using microarrays ⬇️

scientific article published on April 20, 2011

Analysis of the real EADGENE data set: comparison of methods and guidelines for data normalisation and selection of differentially expressed genes (open access publication)

scientific article

Analysis of the real EADGENE data set: multivariate approaches and post analysis (open access publication)

scientific article

Data-based filtering for replicated high-throughput transcriptome sequencing experiments

scientific article

Detection and modelling of time-dependent QTL in animal populations

scientific article published on 27 February 2008

Differential meta-analysis of RNA-seq data from multiple studies

scientific article (publication date: 29 March 2014)

Estimation of genetic parameters for test day records of dairy traits in the first three lactations

scientific article published on May 2005

Genetic analysis of growth curves using the SAEM algorithm

scientific article

Identification of marginal causal relationships in gene networks from observational and interventional expression data

scientific article

Joint estimation of causal effects from observational and intervention gene expression data

scientific article

Modelling and estimating heterogeneous variances in threshold models for ordinal discrete data via Winbugs/Openbugs

scientific article

Moderated effect size and P-value combinations for microarray meta-analyses

scientific article published on 23 July 2009

Multivariate character process models for the analysis of two or more correlated function-valued traits

scientific article

Overexpression of miR-30b in the developing mouse mammary gland causes a lactation defect and delays involution

scientific article

Phenotypic and Molecular Alterations in the Mammary Tissue of R-Spondin1 Knock-Out Mice during Pregnancy

scientific article

The EADGENE Microarray Data Analysis Workshop (open access publication).

scientific article

The adult boar testicular and epididymal transcriptomes

scientific article

The genome response to artificial selection: a case study in dairy cattle

scientific article

Use of the score test as a goodness-of-fit measure of the covariance structure in genetic analysis of longitudinal data

scientific article

List of works by Florence Jaffrézic

A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis

A hierarchical poisson log-normal model for network inference from RNA sequencing data

A model selection criterion for model-based clustering of annotated gene expression data

A whole genome Bayesian scan for adaptive genetic divergence in West African cattle

An empirical Bayesian method for estimating biological networks from temporal microarray data

Analysis of a simulated microarray dataset: comparison of methods for data normalisation and detection of differential expression (open access publication).

Analysis of porcine MHC using microarrays ⬇️

Analysis of the real EADGENE data set: comparison of methods and guidelines for data normalisation and selection of differentially expressed genes (open access publication)

Analysis of the real EADGENE data set: multivariate approaches and post analysis (open access publication)

Data-based filtering for replicated high-throughput transcriptome sequencing experiments

Detection and modelling of time-dependent QTL in animal populations

Differential meta-analysis of RNA-seq data from multiple studies

Estimation of genetic parameters for test day records of dairy traits in the first three lactations

Genetic analysis of growth curves using the SAEM algorithm

Identification of marginal causal relationships in gene networks from observational and interventional expression data

Joint estimation of causal effects from observational and intervention gene expression data

Modelling and estimating heterogeneous variances in threshold models for ordinal discrete data via Winbugs/Openbugs

Moderated effect size and P-value combinations for microarray meta-analyses

Multivariate character process models for the analysis of two or more correlated function-valued traits

Overexpression of miR-30b in the developing mouse mammary gland causes a lactation defect and delays involution

Phenotypic and Molecular Alterations in the Mammary Tissue of R-Spondin1 Knock-Out Mice during Pregnancy

The EADGENE Microarray Data Analysis Workshop (open access publication).

The adult boar testicular and epididymal transcriptomes

The genome response to artificial selection: a case study in dairy cattle

Use of the score test as a goodness-of-fit measure of the covariance structure in genetic analysis of longitudinal data