List of works - Metsada Pasmanik-Chor

A flow cytometry-based reporter assay identifies macrolide antibiotics as nonsense mutation read-through agents

scientific article published on December 2015

ALS Along the Axons - Expression of Coding and Noncoding RNA Differs in Axons of ALS models.

scientific article

ANGPTL4 promotes the progression of cutaneous melanoma to brain metastasis

scientific article published on 5 July 2017

Activity-dependent neuroprotective protein (ADNP): a case study for highly conserved chordata-specific genes shaping the brain and mutated in cancer

scientific article published in January 2015

Activity-dependent neuroprotective protein deficiency models synaptic and developmental phenotypes of autism-like syndrome

scientific article published on 24 September 2018

Author Correction: Transcriptome profiling of mouse colonic eosinophils reveals a key role for eosinophils in the induction of s100a8 and s100a9 in mucosal healing.

scientific article published on 23 May 2018

Autosomal recessive ichthyosis with hypotrichosis caused by a mutation in ST14, encoding type II transmembrane serine protease matriptase

scientific article published on 23 January 2007

BRCA1/2 mutations perturb telomere biology: characterization of structural and functional abnormalities in vitro and in vivo

scientific article published on 16 October 2015

Beta Palmitate Improves Bone Length and Quality during Catch-Up Growth in Young Rats

scientific article published on 18 July 2017

Biallelic SZT2 mutations cause infantile encephalopathy with epilepsy and dysmorphic corpus callosum

scientific article

Bosutinib, dasatinib, imatinib, nilotinib, and ponatinib differentially affect the vascular molecular pathways and functionality of human endothelial cells.

scientific article

CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 6: A Key Regulator of Na+ Homeostasis during Germination

scientific article published on 20 March 2019

CD300f:IL-5 cross-talk inhibits adipose tissue eosinophil homing and subsequent IL-4 production

scientific article

COPII collar defines the boundary between ER and ER exit site and does not coat cargo containers

Correction: Cardiac remodeling secondary to chronic volume overload is attenuated by a novel MMP9/2 blocking antibody

scientific article published on 22 October 2020

Correction: MicroRNAs Expression in the Ileal Pouch of Patients with Ulcerative Colitis Is Robustly Up-Regulated and Correlates with Disease Phenotypes

scientific article published on 18 October 2016

Deficiency for the ubiquitin ligase UBE3B in a blepharophimosis-ptosis-intellectual-disability syndrome

scientific article

Differential gene expression and transport functionality in the bundle sheath versus mesophyll - a potential role in leaf mineral homeostasis

scientific article published on 01 June 2017

Downregulation of miR-31, miR-155, and miR-564 in chronic myeloid leukemia cells

scientific article

Drosophila melanogaster Mutated in its GBA1b Ortholog Recapitulates Neuronopathic Gaucher Disease

scientific article published on 09 September 2019

E-selectin regulates gene expression in metastatic colorectal carcinoma cells and enhances HMGB1 release

scientific article

Effects of IKAP/hELP1 deficiency on gene expression in differentiating neuroblastoma cells: implications for familial dysautonomia

scientific article

Endothelial pro-atherosclerotic response to extracellular diabetic-like environment: possible role of thioredoxin-interacting protein

scientific article published on 19 January 2010

Erratum to: A flow cytometry-based reporter assay identifies macrolide antibiotics as nonsense mutation read-through agents

correction of a scholarly article

Erratum: Multiple myeloma BM-MSCs increase the tumorigenicity of MM cells via transfer of VLA4-enriched microvesicles

scientific article published on 01 March 2020

Expression of Quinone Reductase-2 in the Cortex Is a Muscarinic Acetylcholine Receptor-Dependent Memory Consolidation Constraint.

scientific article

Expression pattern of SVEP1 alternatively-spliced forms

scientific article

First trimester human placenta prevents breast cancer cell attachment to the matrix: The role of extracellular matrix.

scientific article published on 9 February 2016

Fluid consumption and taste novelty determines transcription temporal dynamics in the gustatory cortex

scientific article published on 9 February 2016

GEView (Gene Expression View) Tool for Intuitive and High Accessible Visualization of Expression Data for Non-Programmer Biologists

scientific article published in 2018

GIP regulates inflammation and body weight by restraining myeloid-cell-derived S100A8/A9

scientific article published on 19 November 2018

Gene expression alterations in ulcerative colitis patients after restorative proctocolectomy extend to the small bowel proximal to the pouch

scientific article published on 30 June 2014

Gene expression profiles of ileal inflammatory bowel disease correlate with disease phenotype and advance understanding of its immunopathogenesis

scientific article

Gene-expression-based analysis of local and metastatic neuroblastoma variants reveals a set of genes associated with tumor progression in neuroblastoma patients

scientific article published on 01 April 2010

Genetic and antigenic characterization of sigma C protein from avian reovirus

scientific article published on June 2010

Genome-Wide Analyses Identify Filamin-A As a Novel Downstream Target for Insulin and IGF1 Action.

scientific article published on 20 March 2018

Genome-Wide Profiling of Laron Syndrome Patients Identifies Novel Cancer Protection Pathways

scientific article published on 15 June 2019

Genome-wide expression profiling of human lymphoblastoid cell lines identifies CHL1 as a putative SSRI antidepressant response biomarker

scientific article published on February 2011

Genome-wide miRNA expression profiling of human lymphoblastoid cell lines identifies tentative SSRI antidepressant response biomarkers

scientific article published on July 2012

Genome-wide transcriptomic variations of human lymphoblastoid cell lines: insights from pairwise gene-expression correlations

scientific article

Global changes in gene expression of grapefruit peel tissue in response to the yeast biocontrol agent Metschnikowia fructicola.

scientific article published on 21 October 2011

Glucose-Dependent Insulinotropic Polypeptide Receptor Deficiency Leads to Impaired Bone Marrow Hematopoiesis

scientific article

HeatMapViewer: interactive display of 2D data in biology

scientific article

Hierarchical partitioning of metazoan protein conservation profiles provides new functional insights

scientific article

Homozygous MED25 mutation implicated in eye-intellectual disability syndrome

scientific article

Identification of signaling pathways associated with cancer protection in Laron syndrome

scientific article published on 18 April 2016

Identification of thioredoxin-interacting protein (TXNIP) as a downstream target for IGF1 action

scientific article published on 16 January 2018

Increase in Processing Factors Is Involved in Skewed MicroRNA Expression in Patients with Ulcerative Colitis Who Develop Small Intestine Inflammation after Pouch Surgery

scientific article published on 01 April 2018

Infiltrating monocyte-derived macrophages and resident kupffer cells display different ontogeny and functions in acute liver injury

scientific article published on 2 June 2014

Inhibition of ZEB1 expression induces redifferentiation of adult human β cells expanded in vitro

scientific article

Insulin-like growth factor-I receptor (IGF-IR) translocates to nucleus and autoregulates IGF-IR gene expression in breast cancer cells

scientific article published on 29 November 2011

Insulin-producing cells generated from dedifferentiated human pancreatic beta cells expanded in vitro

scientific article

Inter-Tumor Heterogeneity-Melanomas Respond Differently to GM-CSF-Mediated Activation

scientific article published on 13 July 2020

Intercellular transfer of small RNAs from astrocytes to lung tumor cells induces resistance to chemotherapy

scientific article published on 9 February 2016

Isp7 Is a Novel Regulator of Amino Acid Uptake in the TOR Signaling Pathway

scientific article published in April 2014

Isp7 is a novel regulator of amino acid uptake in the TOR signaling pathway ⬇️

scientific article published on 16 December 2013

Klotho suppresses colorectal cancer through modulation of the unfolded protein response

scientific article published on 19 September 2018

Ligand-binding Domain-activating Mutations of ESR1 Rewire Cellular Metabolism of Breast Cancer Cells

scientific article published on 07 February 2019

Ly6Chi Monocytes and Their Macrophage Descendants Regulate Neutrophil Function and Clearance in Acetaminophen-Induced Liver Injury

scientific article

Maternal Diet Enriched with α-Linolenic or Saturated Fatty Acids Differentially Regulates Gene Expression in the Liver of Mouse Offspring

scientific article published on 21 January 2016

Mesenchymal Stem Cell-Derived Extracellular Vesicles as Proposed Therapy in a Rat Model of Cerebral Small Vessel Disease

scientific article published in 2022

MiR-30e induces apoptosis and sensitizes K562 cells to imatinib treatment via regulation of the BCR-ABL protein

scientific article published on 8 October 2014

Micro-RNA Expression Patterns Predict Metastatic Spread in Solid Pseudopapillary Neoplasms of the Pancreas

scientific article published on 13 March 2020

MicroRNA expression signatures in intraductal papillary mucinous neoplasm of the pancreas

scientific article published on 7 January 2013

MicroRNA profiling of pancreatic ductal adenocarcinoma (PDAC) reveals signature expression related to lymph node metastasis

article published in 2019

MicroRNA profiling reveals opposing expression patterns for miR-511 in alternatively and classically activated macrophages

scientific article

MicroRNAs Affect Complement Regulator Expression and Mitochondrial Activity to Modulate Cell Resistance to Complement-Dependent Cytotoxicity

scientific article published on 19 September 2019

MicroRNAs Expression in the Ileal Pouch of Patients with Ulcerative Colitis Is Robustly Up-Regulated and Correlates with Disease Phenotypes

scientific article

MicroRNAs are essential for differentiation of the retinal pigmented epithelium and maturation of adjacent photoreceptors

scientific article published on 10 June 2015

Microcephaly thin corpus callosum intellectual disability syndrome caused by mutated TAF2.

scientific article published on 29 September 2013

Molecular profiling of functional interactions between pre-osteoblastic and breast carcinoma cells

scientific article

Multiple congenital anomalies-hypotonia-seizures syndrome is caused by a mutation in PIGN.

scientific article

Multiple myeloma BM-MSCs increase the tumorigenicity of MM cells via transfer of VLA4-enriched microvesicles

scientific article published on 01 March 2020

Mutated nup62 causes autosomal recessive infantile bilateral striatal necrosis

scientific article

NLRP3 inflammasome in fibroblasts links tissue damage with inflammation in breast cancer progression and metastasis

scientific article published on 26 September 2019

Pax6 regulates gene expression in the vertebrate lens through miR-204

scientific article

Placenta-breast cancer cell interactions promote cancer cell epithelial mesenchymal transition via TGFβ/JNK pathway.

scientific article

Placenta-conditioned extracellular matrix (ECM) activates breast cancer cell survival mechanisms: A key for future distant metastases

scientific article published on 18 December 2018

Platinum-resistance in ovarian cancer cells is mediated by IL-6 secretion via the increased expression of its target cIAP-2.

scientific article published on 28 September 2012

Prevalence of glucocerebrosidase mutations in the Israeli Ashkenazi Jewish population

scientific article published on 01 January 1998

Profiling and Bioinformatics Analyses Reveal Chronic Lymphocytic Leukemia Cells Share a Unique Circular RNA Expression Pattern

scientific article published on 10 April 2020

Proteomic analysis of combined IGF1 receptor targeted therapy and chemotherapy identifies signatures associated with survival in breast cancer patients

scientific article published on 28 April 2020

R269C variant of ESR1: high prevalence and differential function in a subset of pancreatic cancers

scientific article published on 08 June 2020

RBM28, a protein deficient in ANE syndrome, regulates hair follicle growth via miR-203 and p63.

scientific article published on 26 May 2015

Recycling to the plasma membrane is delayed in EHD1 knockout mice

scientific article published on 01 January 2006

Reduced culture temperature attenuates oxidative stress and inflammatory response facilitating expansion and differentiation of adipose-derived stem cells

scientific article published on 23 January 2020

Restoration of miR-424 suppresses BCR-ABL activity and sensitizes CML cells to imatinib treatment

scientific article published on 16 February 2015

Risk gene-set and pathways in 22q11.2 deletion-related schizophrenia: a genealogical molecular approach

article

SOBP is mutated in syndromic and nonsyndromic intellectual disability and is highly expressed in the brain limbic system

scientific article

STAT3 isoforms differentially affect ACE2 expression: A potential target for COVID-19 therapy

scientific article published on 19 September 2020

Simulation and visualization of multiple KEGG pathways using BioNSi.

scientific article published in January 2017

Systems Analysis of Insulin and IGF1 Receptors Networks in Breast Cancer Cells Identifies Commonalities and Divergences in Expression Patterns

scientific article published on 07 July 2020

T cell-derived microvesicles induce mast cell production of IL-24: relevance to inflammatory skin diseases

scientific article published on 12 June 2013

Tetraspanins stimulate protein synthesis in myeloma cell lines

scientific article published in July 2012

The MARVEL transmembrane motif of occludin mediates oligomerization and targeting to the basolateral surface in epithelia

scientific article published on 3 April 2012

The enigma of the E326K mutation in acid β-glucocerebrosidase

scientific article published on 12 July 2011

The melanoma brain metastatic microenvironment: Aldolase C partakes in shaping the malignant phenotype of melanoma cells - A case of inter-tumor heterogeneity

scientific article published on 03 December 2020

The metastatic microenvironment: Brain-derived soluble factors alter the malignant phenotype of cutaneous and brain-metastasizing melanoma cells

scientific article published on 12 April 2012

The metastatic microenvironment: Melanoma-microglia cross-talk promotes the malignant phenotype of melanoma cells

scientific article published on 01 November 2018

The metastatic microenvironment: brain-residing melanoma metastasis and dormant micrometastasis

scientific article published on 2 December 2011

The myelin proteolipid plasmolipin forms oligomers and induces liquid-ordered membranes in the Golgi complex

scientific article

The type III effector HsvG of the gall-forming Pantoea agglomerans mediates expression of the host gene HSVGT.

scientific article published in February 2012

Transcription factor E2F1 is a potent transactivator of the insulin-like growth factor-I receptor (IGF-IR) gene

scientific article

Transcriptional profiling identifies genes induced by hepatocyte-derived extracellular matrix in metastatic human colorectal cancer cell lines

scientific article published on 29 August 2012

Transient infantile hypertriglyceridemia, fatty liver, and hepatic fibrosis caused by mutated GPD1, encoding glycerol-3-phosphate dehydrogenase 1

scientific article

Tumor macrophages are pivotal constructors of tumor collagenous matrix.

scientific article published on 03 October 2016

Vemurafenib resistance selects for highly malignant brain and lung-metastasizing melanoma cells

scientific article

Vitamin D manipulates miR-181c, miR-20b and miR-15a in human umbilical vein endothelial cells exposed to a diabetic-like environment

scientific article published on 07 January 2014

eIF4E and eIF4GI have distinct and differential imprints on multiple myeloma's proteome and signaling

scientific article published on February 2015

List of works by Metsada Pasmanik-Chor

A flow cytometry-based reporter assay identifies macrolide antibiotics as nonsense mutation read-through agents

ALS Along the Axons - Expression of Coding and Noncoding RNA Differs in Axons of ALS models.

ANGPTL4 promotes the progression of cutaneous melanoma to brain metastasis

Activity-dependent neuroprotective protein (ADNP): a case study for highly conserved chordata-specific genes shaping the brain and mutated in cancer

Activity-dependent neuroprotective protein deficiency models synaptic and developmental phenotypes of autism-like syndrome

Author Correction: Transcriptome profiling of mouse colonic eosinophils reveals a key role for eosinophils in the induction of s100a8 and s100a9 in mucosal healing.

Autosomal recessive ichthyosis with hypotrichosis caused by a mutation in ST14, encoding type II transmembrane serine protease matriptase

BRCA1/2 mutations perturb telomere biology: characterization of structural and functional abnormalities in vitro and in vivo

Beta Palmitate Improves Bone Length and Quality during Catch-Up Growth in Young Rats

Biallelic SZT2 mutations cause infantile encephalopathy with epilepsy and dysmorphic corpus callosum

Bosutinib, dasatinib, imatinib, nilotinib, and ponatinib differentially affect the vascular molecular pathways and functionality of human endothelial cells.

CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 6: A Key Regulator of Na+ Homeostasis during Germination

CD300f:IL-5 cross-talk inhibits adipose tissue eosinophil homing and subsequent IL-4 production

COPII collar defines the boundary between ER and ER exit site and does not coat cargo containers

Correction: Cardiac remodeling secondary to chronic volume overload is attenuated by a novel MMP9/2 blocking antibody

Correction: MicroRNAs Expression in the Ileal Pouch of Patients with Ulcerative Colitis Is Robustly Up-Regulated and Correlates with Disease Phenotypes

Deficiency for the ubiquitin ligase UBE3B in a blepharophimosis-ptosis-intellectual-disability syndrome

Differential gene expression and transport functionality in the bundle sheath versus mesophyll - a potential role in leaf mineral homeostasis

Downregulation of miR-31, miR-155, and miR-564 in chronic myeloid leukemia cells

Drosophila melanogaster Mutated in its GBA1b Ortholog Recapitulates Neuronopathic Gaucher Disease

E-selectin regulates gene expression in metastatic colorectal carcinoma cells and enhances HMGB1 release

Effects of IKAP/hELP1 deficiency on gene expression in differentiating neuroblastoma cells: implications for familial dysautonomia

Endothelial pro-atherosclerotic response to extracellular diabetic-like environment: possible role of thioredoxin-interacting protein

Erratum to: A flow cytometry-based reporter assay identifies macrolide antibiotics as nonsense mutation read-through agents

Erratum: Multiple myeloma BM-MSCs increase the tumorigenicity of MM cells via transfer of VLA4-enriched microvesicles

Expression of Quinone Reductase-2 in the Cortex Is a Muscarinic Acetylcholine Receptor-Dependent Memory Consolidation Constraint.

Expression pattern of SVEP1 alternatively-spliced forms

First trimester human placenta prevents breast cancer cell attachment to the matrix: The role of extracellular matrix.

Fluid consumption and taste novelty determines transcription temporal dynamics in the gustatory cortex

GEView (Gene Expression View) Tool for Intuitive and High Accessible Visualization of Expression Data for Non-Programmer Biologists

GIP regulates inflammation and body weight by restraining myeloid-cell-derived S100A8/A9

Gene expression alterations in ulcerative colitis patients after restorative proctocolectomy extend to the small bowel proximal to the pouch

Gene expression profiles of ileal inflammatory bowel disease correlate with disease phenotype and advance understanding of its immunopathogenesis

Gene-expression-based analysis of local and metastatic neuroblastoma variants reveals a set of genes associated with tumor progression in neuroblastoma patients

Genetic and antigenic characterization of sigma C protein from avian reovirus

Genome-Wide Analyses Identify Filamin-A As a Novel Downstream Target for Insulin and IGF1 Action.

Genome-Wide Profiling of Laron Syndrome Patients Identifies Novel Cancer Protection Pathways

Genome-wide expression profiling of human lymphoblastoid cell lines identifies CHL1 as a putative SSRI antidepressant response biomarker

Genome-wide miRNA expression profiling of human lymphoblastoid cell lines identifies tentative SSRI antidepressant response biomarkers

Genome-wide transcriptomic variations of human lymphoblastoid cell lines: insights from pairwise gene-expression correlations

Global changes in gene expression of grapefruit peel tissue in response to the yeast biocontrol agent Metschnikowia fructicola.

Glucose-Dependent Insulinotropic Polypeptide Receptor Deficiency Leads to Impaired Bone Marrow Hematopoiesis

HeatMapViewer: interactive display of 2D data in biology

Hierarchical partitioning of metazoan protein conservation profiles provides new functional insights

Homozygous MED25 mutation implicated in eye-intellectual disability syndrome

Identification of signaling pathways associated with cancer protection in Laron syndrome

Identification of thioredoxin-interacting protein (TXNIP) as a downstream target for IGF1 action

Increase in Processing Factors Is Involved in Skewed MicroRNA Expression in Patients with Ulcerative Colitis Who Develop Small Intestine Inflammation after Pouch Surgery

Infiltrating monocyte-derived macrophages and resident kupffer cells display different ontogeny and functions in acute liver injury

Inhibition of ZEB1 expression induces redifferentiation of adult human β cells expanded in vitro

Insulin-like growth factor-I receptor (IGF-IR) translocates to nucleus and autoregulates IGF-IR gene expression in breast cancer cells

Insulin-producing cells generated from dedifferentiated human pancreatic beta cells expanded in vitro

Inter-Tumor Heterogeneity-Melanomas Respond Differently to GM-CSF-Mediated Activation

Intercellular transfer of small RNAs from astrocytes to lung tumor cells induces resistance to chemotherapy

Isp7 Is a Novel Regulator of Amino Acid Uptake in the TOR Signaling Pathway

Isp7 is a novel regulator of amino acid uptake in the TOR signaling pathway ⬇️

Klotho suppresses colorectal cancer through modulation of the unfolded protein response

Ligand-binding Domain-activating Mutations of ESR1 Rewire Cellular Metabolism of Breast Cancer Cells

Ly6Chi Monocytes and Their Macrophage Descendants Regulate Neutrophil Function and Clearance in Acetaminophen-Induced Liver Injury

Maternal Diet Enriched with α-Linolenic or Saturated Fatty Acids Differentially Regulates Gene Expression in the Liver of Mouse Offspring

Mesenchymal Stem Cell-Derived Extracellular Vesicles as Proposed Therapy in a Rat Model of Cerebral Small Vessel Disease

MiR-30e induces apoptosis and sensitizes K562 cells to imatinib treatment via regulation of the BCR-ABL protein

Micro-RNA Expression Patterns Predict Metastatic Spread in Solid Pseudopapillary Neoplasms of the Pancreas

MicroRNA expression signatures in intraductal papillary mucinous neoplasm of the pancreas

MicroRNA profiling of pancreatic ductal adenocarcinoma (PDAC) reveals signature expression related to lymph node metastasis

MicroRNA profiling reveals opposing expression patterns for miR-511 in alternatively and classically activated macrophages

MicroRNAs Affect Complement Regulator Expression and Mitochondrial Activity to Modulate Cell Resistance to Complement-Dependent Cytotoxicity

MicroRNAs Expression in the Ileal Pouch of Patients with Ulcerative Colitis Is Robustly Up-Regulated and Correlates with Disease Phenotypes

MicroRNAs are essential for differentiation of the retinal pigmented epithelium and maturation of adjacent photoreceptors

Microcephaly thin corpus callosum intellectual disability syndrome caused by mutated TAF2.

Molecular profiling of functional interactions between pre-osteoblastic and breast carcinoma cells

Multiple congenital anomalies-hypotonia-seizures syndrome is caused by a mutation in PIGN.

Multiple myeloma BM-MSCs increase the tumorigenicity of MM cells via transfer of VLA4-enriched microvesicles

Mutated nup62 causes autosomal recessive infantile bilateral striatal necrosis

NLRP3 inflammasome in fibroblasts links tissue damage with inflammation in breast cancer progression and metastasis

Pax6 regulates gene expression in the vertebrate lens through miR-204

Placenta-breast cancer cell interactions promote cancer cell epithelial mesenchymal transition via TGFβ/JNK pathway.

Placenta-conditioned extracellular matrix (ECM) activates breast cancer cell survival mechanisms: A key for future distant metastases

Platinum-resistance in ovarian cancer cells is mediated by IL-6 secretion via the increased expression of its target cIAP-2.