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List of works by Andrea Endimiani

A SYBR® Green-based real-time PCR method for improved detection of mcr-1-mediated colistin resistance in human stool samples.

scientific article published on 8 April 2017

A novel universal DNA labeling and amplification system for rapid microarray-based detection of 117 antibiotic resistance genes in Gram-positive bacteria

scientific article

A two-year analysis of risk factors and outcome in patients with bloodstream infection

scientific article published in February 2003

ACHN-490, a neoglycoside with potent in vitro activity against multidrug-resistant Klebsiella pneumoniae isolates

scientific article published on October 2009

Acinetobacter baumannii isolates from pets and horses in Switzerland: molecular characterization and clinical data

scientific article

Acinetobacter in Veterinary Medicine with emphasis on A. baumannii

scientific article published on 23 August 2018

Antibiotic Susceptibility and Sequence Type Distribution of Ureaplasma Species Isolated from Genital Samples in Switzerland.

scientific article

Antibiotic resistance and phylogenetic characterization of Acinetobacter baumannii strains isolated from commercial raw meat in Switzerland

scientific article published on November 2014

Antimicrobial-Resistant Escherichia coli Strains and Their Plasmids in People, Poultry, and Chicken Meat in Laos

scientific article published in 2021

Are we ready for novel detection methods to treat respiratory pathogens in hospital-acquired pneumonia?

scientific article

Bacteremia due to Klebsiella pneumoniae isolates producing the TEM-52 extended-spectrum beta-lactamase: treatment outcome of patients receiving imipenem or ciprofloxacin

scientific article

Bactericidal activity of penicillin, ceftriaxone, gentamicin and daptomycin alone and in combination against Aerococcus urinae

scientific article published on 6 July 2016

BlaB-15, a new BlaB metallo-β-lactamase variant found in an Elizabethkingia miricola clinical isolate

scientific article published on 17 November 2015

CMY-2-producing Escherichia coli in the nose of pigs

scientific article published on 5 June 2012

Carbapenem-resistant Acinetobacter baumannii and Klebsiella pneumoniae across a hospital system: impact of post-acute care facilities on dissemination

scientific article

Carbapenems: past, present, and future

scientific article

Cefepime: a reappraisal in an era of increasing antimicrobial resistance

scientific article published on December 2008

Characterisation and clinical features of Enterobacter cloacae bloodstream infections occurring at a tertiary care university hospital in Switzerland: is cefepime adequate therapy?

scientific article

Characterisation of the first extended-spectrum β-lactamase (ESBL)-producing Shigella sonnei clinical isolate in Italy

scientific article published on 12 March 2019

Characterization of Neisseria gonorrhoeae isolates detected in Switzerland (1998-2012): emergence of multidrug-resistant clones less susceptible to cephalosporins

scientific article

Characterization of blaKPC-containing Klebsiella pneumoniae isolates detected in different institutions in the Eastern USA.

scientific article published on 20 January 2009

Clonal analysis of Aerococcus urinae isolates by using the repetitive extragenic palindromic PCR (rep-PCR).

scientific article

Clonality and Antimicrobial Susceptibility of Burkholderia cepacia complex Isolates Collected from Cystic Fibrosis Patients during 1998-2013 in Bern, Switzerland

scientific article published on 29 April 2015

Comparison of the in-house made Carba-NP and Blue-Carba tests: Considerations for better detection of carbapenemase-producing Enterobacteriaceae.

scientific article

Deciphering the complete deletion of the mgrb locus in an unusual colistin-resistant klebsiella pneumoniae colonizing the gut of a traveler returning from india

scientific article

Detection of SHV beta-lactamases in Gram-negative bacilli using fluorescein-labeled antibodies

scientific article

Detection, treatment, and prevention of carbapenemase-producing Enterobacteriaceae: recommendations from an International Working Group.

scientific article published on June 2013

Differentiation of IncL and IncM Plasmids Associated with the Spread of Clinically Relevant Antimicrobial Resistance

scientific article published on May 2015

Diversity, virulence, and antimicrobial resistance of the KPC-producing Klebsiella pneumoniae ST307 clone

scientific article

Double Copies of bla(KPC-3)::Tn4401a on an IncX3 Plasmid in Klebsiella pneumoniae Successful Clone ST512 from Italy

scientific article published on 2 November 2015

Effect of antibiotic treatment on establishment and elimination of intestinal colonization by KPC-producing Klebsiella pneumoniae in mice

scientific article

Emergence in Klebsiella pneumoniae and Enterobacter cloacae clinical isolates of the VIM-4 metallo-beta-lactamase encoded by a conjugative plasmid.

scientific article published on February 2004

Emergence of CTX-M-1-producing Salmonella enterica serovar Napoli: A novel ‘enzyme–pathogen association’ in the Italian extended-spectrum β-lactamase (ESBL) endemic context

article

Emergence of Haemophilus parainfluenzae resistant to third-generation cephalosporins in Italy: potential role of PBP3 and PBP5 substitutions in high-level resistance

scientific article published on 09 September 2020

Emergence of Klebsiella pneumoniae co-producing NDM-1, OXA-48, CTX-M-15, CMY-16, QnrA and ArmA in Switzerland

scientific article published on 23 June 2014

Emergence of blaKPC-containing Klebsiella pneumoniae in a long-term acute care hospital: a new challenge to our healthcare system

scientific article published on 09 September 2009

Emergence of extensively drug-resistant Haemophilus parainfluenzae in Switzerland

scientific article published on April 2013

Emergence of linezolid-resistant Staphylococcus aureus after prolonged treatment of cystic fibrosis patients in Cleveland, Ohio

scientific article

Employees of Swiss veterinary clinics colonized with epidemic clones of carbapenemase-producing Escherichia coli

scientific article published on 01 March 2020

Enhancing resistance to cephalosporins in class C beta-lactamases: impact of Gly214Glu in CMY-2.

scientific article

Environmental dissemination of carbapenemase-producing Enterobacteriaceae in rivers in Switzerland

scientific article published on 22 June 2020

Erratum to 'Intestinal colonisation with extended-spectrum cephalosporin- and colistin-resistant Enterobacteriaceae in HIV-positive individuals in Switzerland: molecular features and risk factors' [International Journal of Antimicrobial Agents 49/4

scientific article published on 05 June 2017

Escherichia coli producing CMY-2 β-lactamase in bovine mastitis milk.

scientific article

Evaluation of EDTA- and DPA-Based Microdilution Phenotypic Tests for the Detection of MCR-Mediated Colistin Resistance in Enterobacteriaceae

scientific article published on 15 November 2018

Evaluation of PCR electrospray-ionization mass spectrometry for rapid molecular diagnosis of bovine mastitis.

scientific article published on 12 April 2013

Evaluation of a New Commercial Microarray Platform for the Simultaneous Detection of β-Lactamase and Mcr-1/-2 Genes in Enterobacteriaceae.

scientific article published on 2 August 2017

Evaluation of a commercial microarray system for detection of SHV-, TEM-, CTX-M-, and KPC-type beta-lactamase genes in Gram-negative isolates

scientific article

Evaluation of ceftazidime and NXL104 in two murine models of infection due to KPC-producing Klebsiella pneumoniae

scientific article

Evaluation of updated interpretative criteria for categorizing Klebsiella pneumoniae with reduced carbapenem susceptibility

scientific article

Exploring the inhibition of CTX-M-9 by beta-lactamase inhibitors and carbapenems

scientific article

Extended-spectrum cephalosporin-resistant Escherichia coli in community, specialized outpatient clinic and hospital settings in Switzerland

scientific article published on 12 June 2013

Extended-spectrum cephalosporin-resistant Gram-negative organisms in livestock: an emerging problem for human health?

scientific article published on 05 February 2013

Extensively drug-resistant community-acquired Acinetobacter baumannii sequence type 2 in a dog with urinary tract infection in Thailand

scientific article published on 21 February 2018

Failure of levofloxacin treatment in community-acquired pneumococcal pneumonia

scientific article

First Clinical Case of In Vivo Acquisition of DHA-1 Plasmid-Mediated AmpC in a Salmonella enterica subsp. enterica Isolate

scientific article published on 23 September 2019

First countrywide survey of third-generation cephalosporin-resistant Escherichia coli from broilers, swine, and cattle in Switzerland.

scientific article published in May 2012

First report of OXA-23-mediated carbapenem resistance in sequence type 2 multidrug-resistant Acinetobacter baumannii associated with urinary tract infection in a cat.

scientific article published on 2 December 2013

First report of a multidrug-resistant Klebsiella pneumoniae of sequence type 11 causing sepsis in a free-ranging beaver (Castor fiber).

scientific article published on 12 February 2015

First report of the macrolide efflux genetic assembly (MEGA) element in Haemophilus parainfluenzae.

scientific article published on 2 December 2016

First two cases of severe multifocal infections caused by Klebsiella pneumoniae in Switzerland: characterization of an atypical non-K1/K2-serotype strain causing liver abscess and endocarditis.

scientific article published on 17 July 2017

Genetic factors associated with elevated carbapenem resistance in KPC-producing Klebsiella pneumoniae

scientific article

Genome Sequences of Two Klebsiella pneumoniae Isolates from Different Geographical Regions, Argentina (Strain JHCK1) and the United States (Strain VA360)

scientific article published on March 2013

Genome stability during serial subculturing in hyperepidemic multidrug-resistant Klebsiella pneumoniae and Escherichia coli

scientific article published in 2022

Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages

scientific article published on 04 December 2014

Gut microbiota dynamics in travelers returning from India colonized with extended-spectrum cephalosporin-resistant Enterobacteriaceae: A longitudinal study

scientific article published on 17 October 2018

Heterogeneous Genetic Location of mcr-1 in Colistin-Resistant Escherichia coli Isolated from Humans and Retail Chicken Meat in Switzerland: Emergence of mcr-1-Carrying IncK2 Plasmids

scientific article

High colonization rates of extended-spectrum β-lactamase (ESBL)-producing Escherichia coli in Swiss travellers to South Asia- a prospective observational multicentre cohort study looking at epidemiology, microbiology and risk factors

scientific article

High prevalence of CTX-M-15-producing Klebsiella pneumoniae among inpatients and outpatients with urinary tract infection in Southern India.

scientific article published on 20 March 2008

High prevalence of extended-spectrum β-lactamase, plasmid-mediated AmpC, and carbapenemase genes in pet food

scientific article published on 4 August 2014

High prevalence of extended-spectrum-cephalosporin-resistant enterobacteriaceae in poultry meat in Switzerland: emergence of CMY-2- and VEB-6-possessing Proteus mirabilis

scientific article published on 30 September 2013

IMP-12, a new plasmid-encoded metallo-beta-lactamase from a Pseudomonas putida clinical isolate

scientific article

Identification of plasmid-mediated AmpC beta-lactamases in Escherichia coli, Klebsiella spp., and proteus species can potentially improve reporting of cephalosporin susceptibility testing results

scientific article

In Vitro Activity of 3 Commercial Bacteriophage Cocktails Against Salmonella and Shigella spp. Isolates of Human Origin

scientific article published on 29 May 2018

In Vitro Activity of the Novel Antimicrobial Peptide Dendrimer G3KL against Multidrug-Resistant Acinetobacter baumannii and Pseudomonas aeruginosa

scientific article

In Vivo Evolution of CMY-2 to CMY-33 β-Lactamase in Escherichia coli Sequence Type 131: Characterization of an Acquired Extended-Spectrum AmpC Conferring Resistance to Cefepime

scientific article

In vitro activity of NXL104 in combination with beta-lactams against Klebsiella pneumoniae isolates producing KPC carbapenemases

scientific article published on 15 June 2009

In vitro activity of clinically implemented β-lactams against Aerococcus urinae: presence of non-susceptible isolates in Switzerland

scientific article published on October 2014

In vitro activity of fosfomycin against blaKPC-containing Klebsiella pneumoniae isolates, including those nonsusceptible to tigecycline and/or colistin

scientific article

In vitro activity of fosfomycin alone and in combination with ceftriaxone or azithromycin against clinical Neisseria gonorrhoeae isolates

scientific article

In vitro activity of penem-1 in combination with beta-lactams against blaKPC-possessing Klebsiella pneumoniae isolates

scientific article published on February 2010

In vitro activity of three commercial bacteriophage cocktails against multidrug-resistant Escherichia coli and Proteus spp. strains of human and non-human origin.

scientific article published on 20 February 2017

In vitro susceptibility of Aerococcus urinae isolates to antibiotics used for uncomplicated urinary tract infection

scientific article published on 23 April 2015

In vivo and in vitro activity of the siderophore monosulfactam BAL30072 against Acinetobacter baumannii

scientific article published on 13 February 2011

Intestinal Carriage of Carbapenemase-Producing Organisms: Current Status of Surveillance Methods

scientific article published on January 2016

Intestinal colonisation with extended-spectrum cephalosporin- and colistin-resistant Enterobacteriaceae in HIV-positive individuals in Switzerland: molecular features and risk factors

scientific article

Intestinal colonisation with extended-spectrum cephalosporin-resistant Enterobacteriaceae in different populations in Switzerland: prevalence, risk factors and molecular features.

scientific article published on 21 November 2017

Intestinal colonisation with extended-spectrum cephalosporin-resistant Escherichia coli in Swiss pets: molecular features, risk factors and transmission with owners

scientific article

Intestinal colonisation with multidrug-resistant Enterobacteriaceae: Screening of Swiss military deployed to Kosovo

scientific article published on 10 September 2019

Intrathecal baclofen does not inhibit the growth of different bacterial species and Candida albicans.

scientific article published in August 2007

Investigating the Use of Bacteriophages as New Decolonization Strategy for Intestinal Carriage of CTX-M-15-producing ST131 Escherichia coli: An In Vitro Continuous Culture System Model

scientific article published on 23 June 2020

Long-term control of hospital-wide, endemic multidrug-resistant Acinetobacter baumannii through a comprehensive "bundle" approach.

scientific article published on 19 May 2009

Microbiology of postoperative infections.

scientific article

Mismatch Amplification Mutation Assay-Based Real-Time PCR for Rapid Detection of Neisseria gonorrhoeae and Antimicrobial Resistance Determinants in Clinical Specimens

scientific article published in 2018

Monitoring of cefepime in urine by micellar electrokinetic capillary chromatography with ultraviolet detection and liquid chromatography coupled to mass spectrometry

scientific article published on 25 September 2018

Multicenter evaluation of a new DNA microarray for rapid detection of clinically relevant bla genes from beta-lactam-resistant gram-negative bacteria

scientific article

Multiplex Real-Time PCR Assay with High-Resolution Melting Analysis for Characterization of Antimicrobial Resistance in Neisseria gonorrhoeae

scientific article published on 25 May 2016

Multiplex real-time PCR assay for detection and classification of Klebsiella pneumoniae carbapenemase gene (bla KPC) variants

scientific article

Nasal Resistome Development in Infants With Cystic Fibrosis in the First Year of Life

article

Non-phenotypic tests to detect and characterize antibiotic resistance mechanisms in Enterobacteriaceae

scientific article

Novel bis-indole agents active against multidrug-resistant Acinetobacter baumannii.

scientific article published on January 2011

Novel vanA-carrying plasmid in a clinical isolate of Enterococcus avium

scientific article published on 11 April 2019

OXA-48 carbapenemase-producing Salmonella enterica serovar Kentucky isolate of sequence type 198 in a patient transferred from Libya to Switzerland

scientific article

Occupational transmission of Acinetobacter baumannii from a United States serviceman wounded in Iraq to a health care worker

scientific article

Occurrence and genetic characteristics of third-generation cephalosporin-resistant Escherichia coli in Swiss retail meat

scientific article published on 28 April 2014

On the island of Zanzibar people in the community are frequently colonized with the same MDR Enterobacterales found in poultry and retailed chicken meat

scientific article published on 20 June 2020

Optimizing therapy for infections caused by enterobacteriaceae producing extended-spectrum beta-lactamases

scientific article published on December 2007

Outbreak of colistin-resistant, carbapenem-resistant Klebsiella pneumoniae in metropolitan Detroit, Michigan

scientific article

Performance in detection and reporting beta-lactam resistance phenotypes in Enterobacteriaceae: a nationwide proficiency study in Italian laboratories.

scientific article

Plasmids Carrying blaCMY -2/4 in Escherichia coli from Poultry, Poultry Meat, and Humans Belong to a Novel IncK Subgroup Designated IncK2.

scientific article published on 15 March 2017

Polyclonal Intestinal Colonization with Extended-Spectrum Cephalosporin-Resistant Enterobacteriaceae upon Traveling to India

scientific article published on 12 July 2016

Polyclonal gut colonization with extended-spectrum cephalosporin- and/or colistin-resistant Enterobacteriaceae: a normal status for hotel employees on the island of Zanzibar, Tanzania

scientific article published on 01 October 2019

Poor infection prevention and control standards are associated with environmental contamination with carbapenemase-producing Enterobacterales and other multidrug-resistant bacteria in Swiss companion animal clinics

scientific article published on 23 June 2020

Presence of plasmid-mediated quinolone resistance in Klebsiella pneumoniae isolates possessing blaKPC in the United States

scientific article published on 21 April 2008

Prevalence and characteristics of fluoroquinolone-resistant Aerococcus urinae isolates detected in Switzerland.

scientific article published on 22 February 2014

Prevalence and characterization of metallo-beta-lactamases in clinical isolates of pseudomonas aeruginosa.

scientific article published in February 2004

Prevalence of extended-spectrum β-lactamase-producing Enterobacteriaceae and Methicillin-Resistant Staphylococcus aureus in pig farms in Switzerland

scientific article published on 18 June 2017

Proteus mirabilis bloodstream infections: risk factors and treatment outcome related to the expression of extended-spectrum beta-lactamases

scientific article

Pseudomonas aeruginosa bloodstream infections: risk factors and treatment outcome related to expression of the PER-1 extended-spectrum beta-lactamase

scientific article published on 16 March 2006

Rapid Increase of CTX-M-Producing Shigella sonnei Isolates in Switzerland: Spread of Common Plasmids and International Clones

scientific article published on 27 July 2020

Rapid determination of quinolone resistance in Acinetobacter spp.

scientific article published on 18 March 2009

Rapid identification of bla KPC-possessing Enterobacteriaceae by PCR/electrospray ionization-mass spectrometry

scientific article published on 10 June 2010

Raw meat contaminated with epidemic clones of Burkholderia multivorans found in cystic fibrosis patients

scientific article published on 25 July 2014

Reduced susceptibility to cefepime among Escherichia coli clinical isolates producing novel variants of CMY-2 beta-lactamase

scientific article published on 04 May 2009

Risk Ranking of Antimicrobial-Resistant Hazards Found in Meat in Switzerland

scientific article published on 3 October 2017

Shedding of OXA-181 carbapenemase-producing Escherichia coli from companion animals after hospitalisation in Switzerland: an outbreak in 2018

scientific article published on 01 September 2019

Simultaneous gut colonization by Klebsiella grimontii and Escherichia coli co-possessing the blaKPC-3-carrying pQil plasmid

scientific article published in 2022

Spread in an Italian hospital of a clonal Acinetobacter baumannii strain producing the TEM-92 extended-spectrum beta-lactamase

scientific article published on 2 April 2007

Substrate selectivity and a novel role in inhibitor discrimination by residue 237 in the KPC-2 beta-lactamase

scientific article

Symposium report: One Health meets sequencing

scientific article published on 08 August 2019

Ten key points for the appropriate use of antibiotics in hospitalised patients: a consensus from the Antimicrobial Stewardship and Resistance Working Groups of the International Society of Chemotherapy

scientific article published on 25 July 2016

The Changing Role of the Clinical Microbiology Laboratory in Defining Resistance in Gram-negatives.

scientific article published on June 2016

The EDTA-based disk-combination tests are unreliable for the detection of MCR-mediated colistin-resistance in Enterobacteriaceae

scientific article published on 20 August 2018

The KQ element, a complex genetic region conferring transferable resistance to carbapenems, aminoglycosides, and fluoroquinolones in Klebsiella pneumoniae

scientific article published on 23 June 2008

The continuing challenge of ESBLs

scientific article

Third-generation-cephalosporin-resistant Klebsiella pneumoniae isolates from humans and companion animals in Switzerland: spread of a DHA-producing sequence type 11 clone in a veterinary setting

scientific article published on 2 March 2015

Transmission dynamics of extended-spectrum β-lactamase-producing Enterobacteriaceae in the tertiary care hospital and the household setting

scientific article

Travelers Can Import Colistin-Resistant Enterobacteriaceae, Including Those Possessing the Plasmid-Mediated mcr-1 Gene

scientific article published on 13 June 2016

Travellers returning from the island of Zanzibar colonized with MDR Escherichia coli strains: assessing the impact of local people and other sources

scientific article published on 01 December 2020

Treatment and outcomes in carbapenem-resistant Klebsiella pneumoniae bloodstream infections.

scientific article

Whole-Genome Sequence of the First Extended-Spectrum β-Lactamase-Producing Strain of Salmonella enterica subsp. enterica Serovar Napoli

scientific article published on 13 September 2018

Whole-genome characterization of a Shewanella algae strain co-harboring bla CTX-M-15 and armA genes on a novel IncC plasmid

scientific article published on 16 March 2020

Why are we afraid of Acinetobacter baumannii?

scientific article published on June 2008

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