List of works - David F. Clayton

A cDNA microarray from the telencephalon of juvenile male and female zebra finches

scientific article

Activation and habituation of extracellular signal-regulated kinase phosphorylation in zebra finch auditory forebrain during song presentation.

scientific article

Acute social isolation alters neurogenomic state in songbird forebrain

scientific article published on 22 July 2019

Advancing avian behavioral neuroendocrinology through genomics

scientific article published on 08 October 2013

Affinity chromatographic purification of nucleosomes containing transcriptionally active DNA sequences

scientific article published on 01 July 1987

Birdsong "transcriptomics": neurochemical specializations of the oscine song system

scientific article

Brain transcriptome of the violet-eared waxbill Uraeginthus granatina and recent evolution in the songbird genome.

scientific article

Brain transcriptome sequencing and assembly of three songbird model systems for the study of social behavior

scientific article (publication date: 2014)

Characterization of a novel protein regulated during the critical period for song learning in the zebra finch.

scientific article

Conservation and expression of IQ-domain-containing calpacitin gene products (neuromodulin/GAP-43, neurogranin/RC3) in the adult and developing oscine song control system

scientific article

Context-specific habituation of the zenk gene response to song in adult zebra finches

scientific article published in September 2004

Correspondence between sites of NGFI-A induction and sites of morphological plasticity following exposure to environmental complexity

article

Detailed temporal structure of communication networks in groups of songbirds

scientific article

Development of song responses in the zebra finch caudomedial neostriatum: role of genomic and electrophysiological activities

scientific article published in September 2001

Developmental shifts in gene expression in the auditory forebrain during the sensitive period for song learning

scientific article

Differential induction of the ZENK gene in the avian forebrain and song control circuit after metrazole-induced depolarization.

scientific article published on January 1995

Differential regulation in the avian song control circuit of an mRNA predicting a highly conserved protein related to protein kinase C and the bcr oncogene

scientific article published on February 1, 1992

Dynamic role of postsynaptic caspase-3 and BIRC4 in zebra finch song-response habituation

scientific article

Exposure to long chain polyunsaturated fatty acids triggers rapid multimerization of synucleins.

scientific article

Expression of fragile X mental retardation protein within the vocal control system of developing and adult male zebra finches

scientific article (publication date: 11 November 2008)

Forebrain-enriched RNAs of the canary: a population analysis using hybridization kinetics

scientific article published on 01 January 1990

Functional genomic analysis and neuroanatomical localization of miR-2954, a song-responsive sex-linked microRNA in the zebra finch.

scientific article

Genes and social behavior

scientific article

Habituation in songbirds.

scientific article

Habituation revisited: an updated and revised description of the behavioral characteristics of habituation

scientific article

High throughput analysis reveals dissociable gene expression profiles in two independent neural systems involved in the regulation of social behavior

scientific article (publication date: 19 October 2012)

Immediate-early gene responses in the avian song control system: cloning and expression analysis of the canary c-jun cDNA.

scientific article published in December 1994

Impact of experience-dependent and -independent factors on gene expression in songbird brain

scientific article

Influence of restraint and acute isolation on the selectivity of the adult zebra finch zenk gene response to acoustic stimuli.

scientific article published in October 2002

Integrating genomes, brain and behavior in the study of songbirds

scientific article

Minimal experience required for immediate-early gene induction in zebra finch neostriatum

scientific article published in November 2000

Molecular evolution of genes in avian genomes

scientific article (publication date: 2010)

Noninvasive diffusive optical imaging of the auditory response to birdsong in the zebra finch.

scientific article

Probes for rare mRNAs reveal distributed cell subsets in canary brain.

scientific article published in May 1988

Protein-protein interactions of alpha-synuclein in brain homogenates and transfected cells

scientific article (publication date: November 2001)

Proteomic analyses of zebra finch optic tectum and comparative histochemistry

scientific article

RNA-seq transcriptome analysis of male and female zebra finch cell lines

scientific article (publication date: December 2012)

Rapidly learned song-discrimination without behavioral reinforcement in adult male zebra finches (Taeniopygia guttata).

scientific article published in January 2003

Reptiles and mammals have differentially retained long conserved noncoding sequences from the amniote ancestor.

scientific article

Role of gene regulation in song circuit development and song learning ⬇️

scientific article published on November 1, 1997

Seasonal and tissue-specific regulation of canary androgen receptor messenger ribonucleic acid

scientific article published in February 1994

Seasonal changes in patterns of gene expression in avian song control brain regions

scientific article (publication date: 2012)

Seasonal differences of gene expression profiles in song sparrow (Melospiza melodia) hypothalamus in relation to territorial aggression

scientific article

Sexual differentiation of the zebra finch song system: potential roles for sex chromosome genes

scientific article

Small molecule analysis and imaging of fatty acids in the zebra finch song system using time-of-flight-secondary ion mass spectrometry

scientific article (publication date: August 2011)

Song exposure regulates known and novel microRNAs in the zebra finch auditory forebrain

scientific article

Songbird genomics: methods, mechanisms, opportunities, and pitfalls.

scientific article

Stabilization of alpha-synuclein secondary structure upon binding to synthetic membranes

scientific article (publication date: 17 April 1998)

Synelfin regulation during the critical period for song learning in normal and isolated juvenile zebra finches

scientific article

The canary androgen receptor mRNA is localized in the song control nuclei of the brain and is rapidly regulated by testosterone

scientific article published in February 1995

The genome of a songbird

scientific article

The genomics of memory and learning in songbirds.

scientific article published on 22 July 2013

The opportunities and challenges of large-scale molecular approaches to songbird neurobiology.

scientific article

The role of the genome in experience-dependent plasticity: Extending the analogy of the genomic action potential

scientific article published on 24 May 2019

The synucleins: a family of proteins involved in synaptic function, plasticity, neurodegeneration and disease ⬇️

scientific article published on June 1, 1998

The zebra finch neuropeptidome: prediction, detection and expression

scientific article

Transcript‐ and annotation‐guided genome assembly of the European starling

scientific article published in 2022

Urotensin-related gene transcripts mark developmental emergence of the male forebrain vocal control system in songbirds

scientific article published in Scientific Reports

List of works by David F. Clayton

A cDNA microarray from the telencephalon of juvenile male and female zebra finches

Activation and habituation of extracellular signal-regulated kinase phosphorylation in zebra finch auditory forebrain during song presentation.

Acute social isolation alters neurogenomic state in songbird forebrain

Advancing avian behavioral neuroendocrinology through genomics

Affinity chromatographic purification of nucleosomes containing transcriptionally active DNA sequences

Birdsong "transcriptomics": neurochemical specializations of the oscine song system

Brain transcriptome of the violet-eared waxbill Uraeginthus granatina and recent evolution in the songbird genome.

Brain transcriptome sequencing and assembly of three songbird model systems for the study of social behavior

Characterization of a novel protein regulated during the critical period for song learning in the zebra finch.

Conservation and expression of IQ-domain-containing calpacitin gene products (neuromodulin/GAP-43, neurogranin/RC3) in the adult and developing oscine song control system

Context-specific habituation of the zenk gene response to song in adult zebra finches

Correspondence between sites of NGFI-A induction and sites of morphological plasticity following exposure to environmental complexity

Detailed temporal structure of communication networks in groups of songbirds

Development of song responses in the zebra finch caudomedial neostriatum: role of genomic and electrophysiological activities

Developmental shifts in gene expression in the auditory forebrain during the sensitive period for song learning

Differential induction of the ZENK gene in the avian forebrain and song control circuit after metrazole-induced depolarization.

Differential regulation in the avian song control circuit of an mRNA predicting a highly conserved protein related to protein kinase C and the bcr oncogene

Dynamic role of postsynaptic caspase-3 and BIRC4 in zebra finch song-response habituation

Exposure to long chain polyunsaturated fatty acids triggers rapid multimerization of synucleins.

Expression of fragile X mental retardation protein within the vocal control system of developing and adult male zebra finches

Forebrain-enriched RNAs of the canary: a population analysis using hybridization kinetics

Functional genomic analysis and neuroanatomical localization of miR-2954, a song-responsive sex-linked microRNA in the zebra finch.

Genes and social behavior

Habituation in songbirds.

Habituation revisited: an updated and revised description of the behavioral characteristics of habituation

High throughput analysis reveals dissociable gene expression profiles in two independent neural systems involved in the regulation of social behavior

Immediate-early gene responses in the avian song control system: cloning and expression analysis of the canary c-jun cDNA.

Impact of experience-dependent and -independent factors on gene expression in songbird brain

Influence of restraint and acute isolation on the selectivity of the adult zebra finch zenk gene response to acoustic stimuli.

Integrating genomes, brain and behavior in the study of songbirds

Minimal experience required for immediate-early gene induction in zebra finch neostriatum

Molecular evolution of genes in avian genomes

Noninvasive diffusive optical imaging of the auditory response to birdsong in the zebra finch.

Probes for rare mRNAs reveal distributed cell subsets in canary brain.

Protein-protein interactions of alpha-synuclein in brain homogenates and transfected cells

Proteomic analyses of zebra finch optic tectum and comparative histochemistry

RNA-seq transcriptome analysis of male and female zebra finch cell lines

Rapidly learned song-discrimination without behavioral reinforcement in adult male zebra finches (Taeniopygia guttata).

Reptiles and mammals have differentially retained long conserved noncoding sequences from the amniote ancestor.

Role of gene regulation in song circuit development and song learning ⬇️

Seasonal and tissue-specific regulation of canary androgen receptor messenger ribonucleic acid

Seasonal changes in patterns of gene expression in avian song control brain regions

Seasonal differences of gene expression profiles in song sparrow (Melospiza melodia) hypothalamus in relation to territorial aggression

Sexual differentiation of the zebra finch song system: potential roles for sex chromosome genes

Small molecule analysis and imaging of fatty acids in the zebra finch song system using time-of-flight-secondary ion mass spectrometry

Song exposure regulates known and novel microRNAs in the zebra finch auditory forebrain

Songbird genomics: methods, mechanisms, opportunities, and pitfalls.

Stabilization of alpha-synuclein secondary structure upon binding to synthetic membranes

Synelfin regulation during the critical period for song learning in normal and isolated juvenile zebra finches

The canary androgen receptor mRNA is localized in the song control nuclei of the brain and is rapidly regulated by testosterone

The genome of a songbird

The genomics of memory and learning in songbirds.

The opportunities and challenges of large-scale molecular approaches to songbird neurobiology.

The role of the genome in experience-dependent plasticity: Extending the analogy of the genomic action potential

The synucleins: a family of proteins involved in synaptic function, plasticity, neurodegeneration and disease ⬇️

The zebra finch neuropeptidome: prediction, detection and expression

Transcript‐ and annotation‐guided genome assembly of the European starling

Urotensin-related gene transcripts mark developmental emergence of the male forebrain vocal control system in songbirds