List of works by Evangelos Simeonidis

A community-driven global reconstruction of human metabolism. ⬇️

scientific article

A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology

scientific article

A guide to integrating transcriptional regulatory and metabolic networks using PROM (probabilistic regulation of metabolism).

scientific article published in January 2013

A model of yeast glycolysis based on a consistent kinetic characterisation of all its enzymes

scientific article published on 04 July 2013

Analysis of metabolic networks using a pathway distance metric through linear programming

scientific article

Building a kinetic model of trehalose biosynthesis in Saccharomyces cerevisiae.

scientific article published on January 2011

Capturing the essence of a metabolic network: a flux balance analysis approach.

scientific article published on 21 June 2009

Combining inferred regulatory and reconstructed metabolic networks enhances phenotype prediction in yeast

scientific article

Computing life: Add logos to biology and bios to physics

scientific article published on 24 October 2012

Flux balance analysis: a geometric perspective.

scientific article published on 7 February 2009

Further developments towards a genome-scale metabolic model of yeast

scientific article (publication date: 28 October 2010)

Genome-scale modeling for metabolic engineering.

scientific article published on 13 January 2015

Integrating food webs with metabolic networks: modeling contaminant degradation in marine ecosystems.

scientific article published on 3 February 2015

KiPar, a tool for systematic information retrieval regarding parameters for kinetic modelling of yeast metabolic pathways

scientific article published on 31 March 2009

MINLP models for the synthesis of optimal peptide tags and downstream protein processing

scientific article published in May 2005

Macromolecular networks and intelligence in microorganisms

scientific article published in 2014

MediaDB: a database of microbial growth conditions in defined media

scientific article

Robustness of the p53 network and biological hackers.

scientific article published in June 2005

Something from nothing: bridging the gap between constraint-based and kinetic modelling.

scientific article published on 8 October 2007

Systematic integration of experimental data and models in systems biology ⬇️

scientific article (publication date: 29 November 2010)

Systems biochemistry in practice: experimenting with modelling and understanding, with regulation and control

scientific article published on October 2010

Systems biology: the elements and principles of life

scientific article published on December 2009

Towards a genome-scale kinetic model of cellular metabolism

scientific article

Understanding complexity in neurodegenerative diseases: in silico reconstruction of emergence

scientific article published on 23 July 2012

Why does yeast ferment? A flux balance analysis study

scientific article published on October 2010

Paulina is supported by:

About Paulina

Help