List of works - Satrajit S. Ghosh

A Million Brains in the Cloud

A neuroimaging study of premotor lateralization and cerebellar involvement in the production of phonemes and syllables

scientific article

A very simple, re-executable neuroimaging publication

scientific article (publication date: 10 February 2017)

Adaptive auditory feedback control of the production of formant trajectories in the Mandarin triphthong /iau/ and its pattern of generalization

scientific article

An investigation of the relation between sibilant production and somatosensory and auditory acuity

scientific article

Analysis of task-based functional MRI data preprocessed with fMRIPrep

scientific article published on 08 June 2020

Auditory and somatosensory goals for sibilants

scientific article

Automated assessment of psychiatric disorders using speech: A systematic review

scientific article published on 31 January 2020

BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods.

scientific article

Brain bases of reading fluency in typical reading and impaired fluency in dyslexia

scientific article

Brain connectomics predict response to treatment in social anxiety disorder

scientific article published on 11 August 2015

Brainhack: a collaborative workshop for the open neuroscience community

scientific article

Cine magnetic resonance imaging with simultaneous audio to evaluate pediatric velopharyngeal insufficiency

scientific article published on March 2011

Computing moment-to-moment BOLD activation for real-time neurofeedback

scientific article

Coordination of the first and second formants of the Mandarin triphthong /iau/ revealed by adaptation to auditory perturbations

Data sharing in neuroimaging research

scientific article (publication date: 2012)

DataLad: distributed system for joint management of code, data, and their relationship

scientific article

Decreased Cerebellar-Orbitofrontal Connectivity Correlates with Stuttering Severity: Whole-Brain Functional and Structural Connectivity Associations with Persistent Developmental Stuttering

scientific article

Diffusion Tensor Imaging of Central Auditory Pathways in Patients with Sensorineural Hearing Loss: A Systematic Review.

scientific article published in November 2017

Diffusion imaging of cerebral white matter in persons who stutter: evidence for network-level anomalies

scientific article

Dysfunction of Rapid Neural Adaptation in Dyslexia

scientific article published in December 2016

Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age.

scientific article

Evaluation of volume-based and surface-based brain image registration methods

scientific article

Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging

scientific article published on 07 February 2019

Focal manipulations of formant trajectories reveal a role of auditory feedback in the online control of both within-syllable and between-syllable speech timing

scientific article

Functional gradients of the cerebellum

Functional gradients of the cerebellum: a fundamental movement-to-thought principle

Graph-based clinical diagnosis and prediction using multi-modal neuroimaging data

scientific article published on 21 April 2016

Impaired timing adjustments in response to time-varying auditory perturbation during connected speech production in persons who stutter

scientific article

Instrumentation bias in the use and evaluation of scientific software: recommendations for reproducible practices in the computational sciences

scientific article (publication date: 2013)

Knowing What You Know in Brain Segmentation Using Bayesian Deep Neural Networks

scientific article published on 17 October 2019

Learning from open source software projects to improve scientific review

scientific article

Linked Data in Neuroscience: Applications, Benefits, and Challenges

LittleBrain: A gradient-based tool for the topographical interpretation of cerebellar neuroimaging findings

scientific article published in PLoS ONE

Mapping the human subcortical auditory system using histology, post mortem MRI and in vivo MRI at 7T

Mapping the human subcortical auditory system using histology, postmortem MRI and in vivo MRI at 7T

scientific article published on 01 August 2019

Mindboggle: automated brain labeling with multiple atlases

scientific article

Mindboggling morphometry of human brains.

scientific article

Natural Language Processing Reveals Vulnerable Mental Health Support Groups and Heightened Health Anxiety on Reddit during COVID-19: An Observational Study

scientific article published on 13 September 2020

Neural modeling and imaging of the cortical interactions underlying syllable production

scientific article

NeuroVault.org: A repository for sharing unthresholded statistical maps, parcellations, and atlases of the human brain

scientific article

NeuroVault.org: a web-based repository for collecting and sharing unthresholded statistical maps of the human brain

scientific article

Neurodevelopmental and Psychiatric Symptoms in Patients with a Cyst Compressing the Cerebellum: an Ongoing Enigma

scientific article published on 01 February 2020

Neurofeedback and neuroplasticity of visual self-processing in depressed and healthy adolescents: A preliminary study

scientific article published on 11 September 2019

Neurophysiological Vocal Source Modeling for Biomarkers of Disease

Neuroscout, a unified platform for generalizable and reproducible fMRI research

scientific article published in 2022

NiTransforms: A Python tool to read, represent, manipulate, and apply dimensional spatial transforms

scientific article published on 10 September 2021

Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in python

scientific article

OME-Zarr: a cloud-optimized bioimaging file format with international community support

scientific article published in 2023

Open Neuroimaging Laboratory

scientific article published on 08 May 2016

Optimized design and analysis of sparse-sampling FMRI experiments

scientific article

Phonological Working Memory for Words and Nonwords in Cerebral Cortex.

scientific article published on 19 June 2017

Predicting Activation Across Individuals with Resting-State Functional Connectivity Based Multi-Atlas Label Fusion

Predicting Treatment Response from Resting State fMRI Data: Comparison of Parcellation Approaches

article

Predicting treatment response in social anxiety disorder from functional magnetic resonance imaging

scientific article published on January 2013

Prediction as a humanitarian and pragmatic contribution from human cognitive neuroscience

scientific article

ROI-based analysis of fMRI data incorporating individual differences in brain anatomy

Region of interest based analysis of functional imaging data

scientific article

Relation of white-matter microstructure to reading ability and disability in beginning readers

scientific article published on 7 March 2016

Representation of Sound Categories in Auditory Cortical Maps

article

Roles of default-mode network and supplementary motor area in human vigilance performance: evidence from real-time fMRI.

scientific article

Sharing brain mapping statistical results with the neuroimaging data model

scientific article

Situating the default-mode network along a principal gradient of macroscale cortical organization

scientific article published on 18 October 2016

The Brain Imaging Data Structure: a standard for organizing and describing outputs of neuroimaging experiments

article

The Healthy Brain Network Serial Scanning Initiative: a resource for evaluating inter-individual differences and their reliabilities across scan conditions and sessions

scientific article

The Neurodata Without Borders ecosystem for neurophysiological data science

scientific article published in 2022

The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments

scientific article, 2016

The influence of auditory acuity on acoustic variability and the use of motor equivalence during adaptation to a perturbation

scientific article published on 21 October 2010

Variation in vowel production

Weak responses to auditory feedback perturbation during articulation in persons who stutter: evidence for abnormal auditory-motor transformation

scientific article

fMRI investigation of unexpected somatosensory feedback perturbation during speech

scientific article

fMRIPrep: a robust preprocessing pipeline for functional MRI

scientific article published on 10 December 2018

List of works by Satrajit S. Ghosh

A Million Brains in the Cloud

A neuroimaging study of premotor lateralization and cerebellar involvement in the production of phonemes and syllables

A very simple, re-executable neuroimaging publication

Adaptive auditory feedback control of the production of formant trajectories in the Mandarin triphthong /iau/ and its pattern of generalization

An investigation of the relation between sibilant production and somatosensory and auditory acuity

Analysis of task-based functional MRI data preprocessed with fMRIPrep

Auditory and somatosensory goals for sibilants

Automated assessment of psychiatric disorders using speech: A systematic review

BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods.

Brain bases of reading fluency in typical reading and impaired fluency in dyslexia

Brain connectomics predict response to treatment in social anxiety disorder

Brainhack: a collaborative workshop for the open neuroscience community

Cine magnetic resonance imaging with simultaneous audio to evaluate pediatric velopharyngeal insufficiency

Computing moment-to-moment BOLD activation for real-time neurofeedback

Coordination of the first and second formants of the Mandarin triphthong /iau/ revealed by adaptation to auditory perturbations

Data sharing in neuroimaging research

DataLad: distributed system for joint management of code, data, and their relationship

Decreased Cerebellar-Orbitofrontal Connectivity Correlates with Stuttering Severity: Whole-Brain Functional and Structural Connectivity Associations with Persistent Developmental Stuttering

Diffusion Tensor Imaging of Central Auditory Pathways in Patients with Sensorineural Hearing Loss: A Systematic Review.

Diffusion imaging of cerebral white matter in persons who stutter: evidence for network-level anomalies

Dysfunction of Rapid Neural Adaptation in Dyslexia

Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age.

Evaluation of volume-based and surface-based brain image registration methods

Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging

Focal manipulations of formant trajectories reveal a role of auditory feedback in the online control of both within-syllable and between-syllable speech timing

Functional gradients of the cerebellum

Functional gradients of the cerebellum: a fundamental movement-to-thought principle

Graph-based clinical diagnosis and prediction using multi-modal neuroimaging data

Impaired timing adjustments in response to time-varying auditory perturbation during connected speech production in persons who stutter

Instrumentation bias in the use and evaluation of scientific software: recommendations for reproducible practices in the computational sciences

Knowing What You Know in Brain Segmentation Using Bayesian Deep Neural Networks

Learning from open source software projects to improve scientific review

Linked Data in Neuroscience: Applications, Benefits, and Challenges

LittleBrain: A gradient-based tool for the topographical interpretation of cerebellar neuroimaging findings

Mapping the human subcortical auditory system using histology, post mortem MRI and in vivo MRI at 7T

Mapping the human subcortical auditory system using histology, postmortem MRI and in vivo MRI at 7T

Mindboggle: automated brain labeling with multiple atlases

Mindboggling morphometry of human brains.

Natural Language Processing Reveals Vulnerable Mental Health Support Groups and Heightened Health Anxiety on Reddit during COVID-19: An Observational Study

Neural modeling and imaging of the cortical interactions underlying syllable production

NeuroVault.org: A repository for sharing unthresholded statistical maps, parcellations, and atlases of the human brain

NeuroVault.org: a web-based repository for collecting and sharing unthresholded statistical maps of the human brain

Neurodevelopmental and Psychiatric Symptoms in Patients with a Cyst Compressing the Cerebellum: an Ongoing Enigma

Neurofeedback and neuroplasticity of visual self-processing in depressed and healthy adolescents: A preliminary study

Neurophysiological Vocal Source Modeling for Biomarkers of Disease

Neuroscout, a unified platform for generalizable and reproducible fMRI research

NiTransforms: A Python tool to read, represent, manipulate, and apply dimensional spatial transforms

Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in python

OME-Zarr: a cloud-optimized bioimaging file format with international community support

Open Neuroimaging Laboratory

Optimized design and analysis of sparse-sampling FMRI experiments

Phonological Working Memory for Words and Nonwords in Cerebral Cortex.

Predicting Activation Across Individuals with Resting-State Functional Connectivity Based Multi-Atlas Label Fusion

Predicting Treatment Response from Resting State fMRI Data: Comparison of Parcellation Approaches

Predicting treatment response in social anxiety disorder from functional magnetic resonance imaging

Prediction as a humanitarian and pragmatic contribution from human cognitive neuroscience

ROI-based analysis of fMRI data incorporating individual differences in brain anatomy

Region of interest based analysis of functional imaging data

Relation of white-matter microstructure to reading ability and disability in beginning readers

Representation of Sound Categories in Auditory Cortical Maps

Roles of default-mode network and supplementary motor area in human vigilance performance: evidence from real-time fMRI.

Sharing brain mapping statistical results with the neuroimaging data model

Situating the default-mode network along a principal gradient of macroscale cortical organization

The Brain Imaging Data Structure: a standard for organizing and describing outputs of neuroimaging experiments

The Healthy Brain Network Serial Scanning Initiative: a resource for evaluating inter-individual differences and their reliabilities across scan conditions and sessions

The Neurodata Without Borders ecosystem for neurophysiological data science

The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments

The influence of auditory acuity on acoustic variability and the use of motor equivalence during adaptation to a perturbation

Variation in vowel production

Weak responses to auditory feedback perturbation during articulation in persons who stutter: evidence for abnormal auditory-motor transformation

fMRI investigation of unexpected somatosensory feedback perturbation during speech

fMRIPrep: a robust preprocessing pipeline for functional MRI