List of works - Matthew A. Campbell

Addressing incomplete lineage sorting and paralogy in the inference of uncertain salmonid phylogenetic relationships

scientific article published on 03 July 2020

Are flatfishes (Pleuronectiformes) monophyletic?

scientific article

Beringian sub-refugia revealed in blackfish (Dallia): implications for understanding the effects of Pleistocene glaciations on Beringian taxa and other Arctic aquatic fauna

scientific article

Breaking Free: The Genomics of Allopolyploidy-Facilitated Niche Expansion in White Clover

scientific article published on 25 April 2019

Comparative Genomic Analyses and a Novel Linkage Map for Cisco (Coregonus artedi) Provide Insights into Chromosomal Evolution and Rediploidization Across Salmonids

scientific article published on 01 July 2020

Comparative genomic analyses and a novel linkage map for cisco (Coregonus artedi) provide insights into chromosomal evolution and rediploidization across salmonids

scientific article published on 8 November 2019

Cryptic Species of Freshwater Sculpin (Cottidae: Cottus) in California, USA ⬇️

scientific article published on 17 June 2022

Early-branching euteleost relationships: areas of congruence between concatenation and coalescent model inferences.

scientific article published on 8 September 2017

Epichloë hybrida, sp. nov., an emerging model system for investigating fungal allopolyploidy.

scientific article

Evolutionary affinities of the unfathomable Parabrotulidae: Molecular data indicate placement of Parabrotula within the family Bythitidae, Ophidiiformes

scientific article

Genomic and common garden data reveal significant genetic differentiation in the endangered San Fernando Valley spineflower Chorizanthe parryi var. fernandina

scientific article published in 2024

Genomics reveal the origins and current structure of a genetically depauperate freshwater species in its introduced Alaskan range

scientific article published in 2023

HyLiTE: accurate and flexible analysis of gene expression in hybrid and allopolyploid species.

scientific article

Long-Term Conservation of Ohnologs Through Partial Tetrasomy Following Whole-Genome Duplication in Salmonidae

scientific article published on 05 June 2019

Mitochondrial genomic investigation of flatfish monophyly

scientific article

Mitochondrial phylogeography of a Beringian relict: the endemic freshwater genus of blackfish Dallia (Esociformes).

scientific article published in February 2014

Molecular Systematics of Redband Trout from Genome-Wide DNA Sequencing Substantiates the Description of a New Taxon (Salmonidae: Oncorhynchus mykiss calisulat) from the McCloud River

scientific article published in 2023

Molecular data do not provide unambiguous support for the monophyly of flatfishes (Pleuronectiformes): a reply to Betancur-R and Ortí.

scientific article

Multilocus phylogenetic analysis of the first molecular data from the rare and monotypic Amarsipidae places the family within the Pelagia and highlights limitations of existing data sets in resolving pelagian interrelationships.

scientific article published on 8 March 2018

Origins and relationships of the Pleuronectoidei: Molecular and morphological analysis of living and fossil taxa

scientific article published in 2019

Pike and salmon as sister taxa: detailed intraclade resolution and divergence time estimation of Esociformes + Salmoniformes based on whole mitochondrial genome sequences.

scientific article

Polygenic discrimination of migratory phenotypes in an estuarine forage fish

scientific article published on 31 May 2022

Prolonged morphological expansion of spiny-rayed fishes following the end-Cretaceous

scientific article published in 2022

Publisher Correction: Sex-dependent dominance maintains migration supergene in rainbow trout

scientific article published on 01 January 2020

Sex-dependent dominance maintains migration supergene in rainbow trout

scientific article published on 25 November 2019

The transcriptome of Utricularia vulgaris, a rootless plant with minimalist genome, reveals extreme alternative splicing and only moderate sequence similarity with Utricularia gibba.

scientific article

The tree of life and a new classification of bony fishes

scientific article published in 2013

List of works by Matthew A. Campbell

Addressing incomplete lineage sorting and paralogy in the inference of uncertain salmonid phylogenetic relationships

Are flatfishes (Pleuronectiformes) monophyletic?

Beringian sub-refugia revealed in blackfish (Dallia): implications for understanding the effects of Pleistocene glaciations on Beringian taxa and other Arctic aquatic fauna

Breaking Free: The Genomics of Allopolyploidy-Facilitated Niche Expansion in White Clover

Comparative Genomic Analyses and a Novel Linkage Map for Cisco (Coregonus artedi) Provide Insights into Chromosomal Evolution and Rediploidization Across Salmonids

Comparative genomic analyses and a novel linkage map for cisco (Coregonus artedi) provide insights into chromosomal evolution and rediploidization across salmonids

Cryptic Species of Freshwater Sculpin (Cottidae: Cottus) in California, USA ⬇️

Early-branching euteleost relationships: areas of congruence between concatenation and coalescent model inferences.

Epichloë hybrida, sp. nov., an emerging model system for investigating fungal allopolyploidy.

Evolutionary affinities of the unfathomable Parabrotulidae: Molecular data indicate placement of Parabrotula within the family Bythitidae, Ophidiiformes

Genomic and common garden data reveal significant genetic differentiation in the endangered San Fernando Valley spineflower Chorizanthe parryi var. fernandina

Genomics reveal the origins and current structure of a genetically depauperate freshwater species in its introduced Alaskan range

HyLiTE: accurate and flexible analysis of gene expression in hybrid and allopolyploid species.

Long-Term Conservation of Ohnologs Through Partial Tetrasomy Following Whole-Genome Duplication in Salmonidae

Mitochondrial genomic investigation of flatfish monophyly

Mitochondrial phylogeography of a Beringian relict: the endemic freshwater genus of blackfish Dallia (Esociformes).

Molecular Systematics of Redband Trout from Genome-Wide DNA Sequencing Substantiates the Description of a New Taxon (Salmonidae: Oncorhynchus mykiss calisulat) from the McCloud River

Molecular data do not provide unambiguous support for the monophyly of flatfishes (Pleuronectiformes): a reply to Betancur-R and Ortí.

Multilocus phylogenetic analysis of the first molecular data from the rare and monotypic Amarsipidae places the family within the Pelagia and highlights limitations of existing data sets in resolving pelagian interrelationships.

Origins and relationships of the Pleuronectoidei: Molecular and morphological analysis of living and fossil taxa

Pike and salmon as sister taxa: detailed intraclade resolution and divergence time estimation of Esociformes + Salmoniformes based on whole mitochondrial genome sequences.

Polygenic discrimination of migratory phenotypes in an estuarine forage fish

Prolonged morphological expansion of spiny-rayed fishes following the end-Cretaceous

Publisher Correction: Sex-dependent dominance maintains migration supergene in rainbow trout

Sex-dependent dominance maintains migration supergene in rainbow trout

The transcriptome of Utricularia vulgaris, a rootless plant with minimalist genome, reveals extreme alternative splicing and only moderate sequence similarity with Utricularia gibba.

The tree of life and a new classification of bony fishes