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List of works by Ronald G. Larson

A Simple Analytical Model for Predicting the Collapsed State of Self-Attractive Semiflexible Polymers

scientific article published on 16 July 2016

A bead-spring model for running and tumbling of flagellated swimmers: detailed predictions compared to experimental data for E. coli

scientific article

A framework for multi-scale simulation of crystal growth in the presence of polymers.

scientific article published on 9 February 2017

A hybrid Brownian dynamics/constitutive model for yielding, aging, and rejuvenation in deforming polymeric glasses

scientific article published on 25 July 2016

A metastable nematic precursor accelerates polyethylene oligomer crystallization as determined by atomistic simulations and self-consistent field theory

scientific article published on 01 June 2019

A transport model and constitutive equation for oppositely charged polyelectrolyte mixtures with application to layer-by-layer assembly

scientific article published on 01 November 2018

A unified multicomponent stress-diffusion model of drug release from non-biodegradable polymeric matrix tablets.

scientific article

Adsorption and elution characteristics of nucleic acids on silica surfaces and their use in designing a miniaturized purification unit.

scientific article

Adsorption of Plasma Proteins onto PEGylated Lipid Bilayers: The Effect of PEG Size and Grafting Density

scientific article published on 5 April 2016

An integrated microfluidic device for influenza and other genetic analyses

scientific article published on 18 August 2005

Analysis of solvation and gelation behavior of methylcellulose using atomistic molecular dynamics simulations

scientific article published on 21 November 2014

Analysis of the effects of Marangoni stresses on the microflow in an evaporating sessile droplet

scientific article published in April 2005

Analysis of the microfluid flow in an evaporating sessile droplet

scientific article published in April 2005

Assessing the Efficacy of Poly(N-isopropylacrylamide) for Drug Delivery Applications Using Molecular Dynamics Simulations

scientific article published on 27 December 2016

Assessing the efficiency of polymeric excipients by atomistic molecular dynamics simulations

scientific article published on 16 April 2014

Assessment of mesoscopic particle-based methods in microfluidic geometries

scientific article published in August 2013

Atomic force microscopic study of aggregation of RecA-DNA nucleoprotein filaments into left-handed supercoiled bundles

scientific article

Binding and insertion of alpha-helical anti-microbial peptides in POPC bilayers studied by molecular dynamics simulations

scientific article published in November 2004

Binding kinetics of lock and key colloids

scientific article published in May 2015

Biophysics. Going with the flow

scientific article published in October 2007

Boundary-driven colloidal crystallization in simple shear flow

scientific article published on 24 November 2010

Brownian dynamics method for simulation of binding kinetics of patterned colloidal spheres with hydrodynamic interactions ⬇️

scientific article published on May 7, 2013

Brownian dynamics simulations of coagulation of dilute uniform and anisotropic particles under shear flow spanning low to high Peclet numbers

scientific article published in January 2015

Brownian dynamics simulations with stiff finitely extensible nonlinear elastic-Fraenkel springs as approximations to rods in bead-rod models

scientific article published in January 2006

Cation and anion transport through hydrophilic pores in lipid bilayers

scientific article published in August 2006

Chain retraction potential in a fixed entanglement network

scientific article published on 23 February 2005

Coarse-grained modeling of crystal growth and polymorphism of a model pharmaceutical molecule

scientific article published in October 2016

Coarse-grained molecular dynamics simulation of self-assembly and surface adsorption of ionic surfactants using an implicit water model

scientific article published on 21 January 2015

Coarse-grained molecular dynamics studies of the concentration and size dependence of fifth- and seventh-generation PAMAM dendrimers on pore formation in DMPC bilayer

scientific article published on 10 June 2008

Coarse-grained simulations of stretching entangled DNA using oscillating electric fields.

scientific article published on 8 September 2010

Comparing experimental and simulated pressure-area isotherms for DPPC

scientific article published on 16 January 2008

Computational Modeling of Hydroxypropyl-Methylcellulose Acetate Succinate (HPMCAS) and Phenytoin Interactions: A Systematic Coarse-Graining Approach.

scientific article published on 31 January 2017

Computational self-assembly of colloidal crystals from Platonic polyhedral sphere clusters

scientific article published on 01 August 2019

Conformation dependence of DNA electrophoretic mobility in a converging channel ⬇️

scientific article published on August 1, 2010

Controlled Levitation of Colloids through Direct Current Electric Fields.

scientific article published on 27 June 2017

Correction: The effect of wall depletion and hydrodynamic interactions on stress-gradient-induced polymer migration

scientific article published on 7 September 2017

Correction: Time-dependent shear rate inhomogeneities and shear bands in a thixotropic yield-stress fluid under transient shear

scientific article published on 08 October 2020

DNA condensation by partially acetylated poly(amido amine) dendrimers: effects of dendrimer charge density on complex formation.

scientific article published on 3 September 2013

Definitions of entanglement spacing and time constants in the tube model

article

Deviations from Dynamic Dilution in the Terminal Relaxation of Star Polymers ⬇️

scientific article published on October 18, 2001

Distribution of single DNA molecule electrophoretic mobilities in semidilute and dilute hydroxyethylcellulose solutions

scientific article published on 01 April 2004

Effect of Arginine-Rich Peptide Length on the Structure and Binding Strength of siRNA–Peptide Complexes ⬇️

scientific article published on May 30, 2013

Effect of headgroup size, charge, and solvent structure on polymer-micelle interactions, studied by molecular dynamics simulations

scientific article published in November 2009

Effect of salt on the interactions of antimicrobial peptides with zwitterionic lipid bilayers

scientific article published on 24 March 2006

Efficient estimation of binding free energies between peptides and an MHC class II molecule using coarse-grained molecular dynamics simulations with a weighted histogram analysis method.

scientific article published on 28 June 2017

Electrostretching DNA molecules using polymer-enhanced media within microfabricated devices

scientific article

Entropy-Mediated Patterning of Surfactant-Coated Nanoparticles and Surfaces

scientific article published in Physical Review Letters

Fluid dynamics. Turbulence without inertia

scientific article published on 01 May 2000

Fluidic trapping of deformable polymers in microflows

scientific article published on 10 July 2008

Folding of lipid monolayers containing lung surfactant proteins SP-B(1-25) and SP-C studied via coarse-grained molecular dynamics simulations

scientific article published on 14 May 2010

Forward Flux Sampling of Polymer Desorption Paths from a Solid Surface into Dilute Solution

scientific article published on 03 October 2020

From well-entangled to partially-entangled wormlike micelles

scientific article published on 04 January 2019

Fundamentals of magnet-actuated droplet manipulation on an open hydrophobic surface

scientific article

Glass rheology: From mode-coupling theory to a dynamical yield criterion.

scientific article published on 14 August 2009

Growth Kinetics in Layer-by-Layer Assemblies of Organic Nanoparticles and Polyelectrolytes

scientific article

In Retrospect: Twenty years of drying droplets

scientific article published in October 2017

Inertial migration of a rigid sphere in plane Poiseuille flow as a test of dissipative particle dynamics simulations

scientific article published on 01 October 2018

Inertio-capillary cross-streamline drift of droplets in Poiseuille flow using dissipative particle dynamics simulations.

scientific article published on 7 March 2018

Injectable drug depot engineered to release multiple ophthalmic therapeutic agents with precise time profiles for postoperative treatment following ocular surgery.

scientific article published on 20 April 2018

Kinetic modeling and design of colloidal lock and key assembly

scientific article published on 28 October 2015

Light-induced molecular cutting: localized reaction on a single DNA molecule

scientific article published in August 2003

Lipid bilayer curvature and pore formation induced by charged linear polymers and dendrimers: the effect of molecular shape

scientific article published on 04 September 2008

Local stress control of spatiotemporal ordering of colloidal crystals in complex flows

scientific article published on 15 July 2008

Marangoni effect reverses coffee-ring depositions

scientific article

Materials science. Predicting the flow of real polymers

scientific article published on 01 September 2011

Mechanism of polymer drag reduction using a low-dimensional model

scientific article published on 6 December 2006

Methods of stretching DNA molecules using flow fields

scientific article published in January 2007

Modeling ssDNA electrophoretic migration with band broadening in an entangled or cross-linked network.

scientific article published on August 2007

Modeling the Hydrophobicity of Nanoparticles and Their Interaction with Lipids and Proteins

scientific article

Modeling the buildup of exponentially growing polyelectrolyte multilayer films

scientific article published on 01 April 2009

Modeling the relaxation of polymer glasses under shear and elongational loads ⬇️

scientific article published on March 28, 2013

Molecular dynamics simulation of interactions between a sodium dodecyl sulfate micelle and a poly(ethylene oxide) polymer

scientific article

Molecular dynamics simulation of phase transitions in model lung surfactant monolayers ⬇️

scientific article published on July 13, 2011

Molecular dynamics simulations of PAMAM dendrimer-induced pore formation in DPPC bilayers with a coarse-grained model

scientific article published in September 2006

Molecular dynamics simulations of model trans-membrane peptides in lipid bilayers: a systematic investigation of hydrophobic mismatch

scientific article published on 20 January 2006

Molecular dynamics simulations of sodium dodecyl sulfate micelles in water-the effect of the force field

scientific article published on 26 March 2014

Molecular dynamics simulations of structure-property relationships of Tween 80 surfactants in water and at interfaces.

scientific article published on 3 November 2014

Molecular dynamics simulations of the anchoring and tilting of the lung-surfactant peptide SP-B1-25 in palmitic acid monolayers

scientific article published on 16 September 2005

Molecular dynamics simulations of threadlike cetyltrimethylammonium chloride micelles: effects of sodium chloride and sodium salicylate salts.

scientific article published in October 2009

Molecular dynamics studies of the size, shape, and internal structure of 0% and 90% acetylated fifth-generation polyamidoamine dendrimers in water and methanol

scientific article published on March 2006

Molecular dynamics study of the lung surfactant peptide SP-B1-25 with DPPC monolayers: insights into interactions and peptide position and orientation

scientific article published on March 2005

Molecular dynamics study of the structure and interparticle interactions of polyethylene glycol-conjugated PAMAM dendrimers

scientific article published on October 2009

Molecular engineering of peptides

scientific article published in November 2003

Monte Carlo simulation of a disclination core in nematic solutions of rodlike molecules

scientific article published on 01 May 1993

Monte-Carlo simulations of PAMAM dendrimer-DNA interactions.

scientific article

Multiscale Computational Modeling of the Nanostructure of Solid Dispersions of Hydroxypropyl Methylcellulose Acetate Succinate (HPMCAS) and Phenytoin

scientific article

Multiscale Modeling of the Effects of Salt and Perfume Raw Materials on the Rheological Properties of Commercial Threadlike Micellar Solutions

scientific article published on 22 February 2017

Multiscale Molecular Dynamics Simulations of Model Hydrophobically Modified Ethylene Oxide Urethane Micelles

scientific article

Multiscale modeling of dendrimers and their interactions with bilayers and polyelectrolytes

scientific article published on 19 January 2009

Nonadditivity of nanoparticle interactions

scientific article published on October 2015

Nonmonotonic Scission and Branching Free Energies as Functions of Hydrotrope Concentration for Charged Micelles

scientific article published on 01 July 2018

Nucleation of urea from aqueous solution: Structure, critical size, and rate

scientific article published in April 2017

One-step preparation of highly monodisperse micron-size particles in organic solvents

scientific article published in November 2004

Overcharging of polyelectrolyte complexes: an entropic phenomenon

scientific article published on 21 October 2020

Paclitaxel-conjugated PAMAM dendrimers adversely affect microtubule structure through two independent modes of action

scientific article published on 21 February 2013

Percolation theory of residual phases in porous media

scientific article published in Nature

Phase behavior of Janus colloids determined by sedimentation equilibrium.

scientific article published in July 2014

Phase diagram of Janus particles: The missing dimension of pressure anisotropy

scientific article published in August 2017

Potentials of mean force and escape times of surfactants from micelles and hydrophobic surfaces using molecular dynamics simulations

scientific article

Power-law scattering in fluids with a nonscalar order parameter

scientific article published on 01 April 1993

Prediction of striped cylindrical micelles (SCMs) formed by dodecyl-β-d-maltoside (DDM) surfactants

scientific article published on 22 March 2018

Preparation of fluorescent particles with long excitation and emission wavelengths dispersible in organic solvents

scientific article

Protein-assisted stretching and immobilization of DNA molecules in a microchannel

scientific article published in November 2006

Proteins searching for their target on DNA by one-dimensional diffusion: overcoming the "speed-stability" paradox.

scientific article published on 05 April 2013

RecA-ssDNA filaments supercoil in the presence of single-stranded DNA-binding protein

scientific article published on 12 April 2007

Regularized thin-fiber model for nanofiber formation by centrifugal spinning

scientific article published on 14 February 2014

Reversible and Irreversible Adsorption Energetics of Poly(ethylene glycol) and Sorbitan Poly(ethoxylate) at a Water/Alkane Interface

scientific article

Re‐Shaping the Coffee Ring ⬇️

scientific article published on January 25, 2012

Rheological State Diagrams for Rough Colloids in Shear Flow.

scientific article published on 11 October 2017

Rich Janus colloid phase behavior under steady shear

scientific article published on 18 March 2016

Role of electrostatic correlations in polyelectrolyte charge association

Rotator-to-Lamellar Phase Transition in Janus Colloids Driven by Pressure Anisotropy

scientific article published on 16 September 2016

Salt- and pH-induced swelling of a poly(acrylic acid) brush via quartz crystal microbalance w/dissipation (QCM-D)

scientific article published on 01 October 2019

Scission Free Energies for Wormlike Surfactant Micelles: Development of a Simulation Protocol, Application, and Validation for Personal Care Formulations.

scientific article published on 15 December 2017

Search for the Source of an Apparent Interfacial Resistance To Mass Transfer of CnEm Surfactants To the Water/Oil Interface

scientific article published on 14 February 2019

Shear-Induced Alignment of Janus Particle Lamellar Structures.

scientific article published on 27 October 2017

Shear-induced chiral migration of particles with anisotropic rigidity

scientific article published on 16 June 2009

Simple Model for the Deformation-Induced Relaxation of Glassy Polymers ⬇️

scientific article published on January 25, 2012

Simulation of DNA motion in a microchannel using stochastic rotation dynamics

scientific article published on March 2007

Simulations of zwitterionic and anionic phospholipid monolayers

scientific article

Single-molecule analysis of 1D diffusion and transcription elongation of T7 RNA polymerase along individual stretched DNA molecules

scientific article

Slip-Spring and Kink Dynamics Models for Fast Extensional Flow of Entangled Polymeric Fluids

article

Solid-state NMR and molecular dynamics simulations reveal the oligomeric ion-channels of TM2-GABA(A) stabilized by intermolecular hydrogen bonding

article

Specific mode of interaction between components of model pulmonary surfactants using computer simulations.

scientific article published in September 2002

Stress-gradient-induced polymer migration in Taylor-Couette flow

scientific article published on 8 August 2017

Stretch and Breakage of Wormlike Micelles under Uniaxial Strain: A Simulation Study and Comparison with Experimental Results

scientific article published on 09 October 2018

Stretching and immobilization of DNA for studies of protein–DNA interactions at the single-molecule level.

scientific article published on 18 April 2007

Stretching of a single tethered polymer in a uniform flow

scientific article

Structure and Rheology of Molten Polymers

article

Structure, topology, and tilt of cell-signaling peptides containing nuclear localization sequences in membrane bilayers determined by solid-state NMR and molecular dynamics simulation studies

scientific article published on January 2007

Tension-Induced Nematic Phase Separation in Bidisperse Homopolymer Melts

scientific article published on 06 November 2018

The MARTINI Coarse-Grained Force Field: Extension to Proteins.

scientific article published in May 2008

The centrosomal protein nephrocystin-6 is mutated in Joubert syndrome and activates transcription factor ATF4

scientific article

The effect of wall depletion and hydrodynamic interactions on stress-gradient-induced polymer migration

scientific article published on 15 June 2016

The hydrodynamics of a run-and-tumble bacterium propelled by polymorphic helical flagella

scientific article

Theoretical Molecular Rheology of Branched Polymers in Simple and Complex Flows: The Pom-Pom Model

scientific article published in Physical Review Letters

Time-dependent shear rate inhomogeneities and shear bands in a thixotropic yield-stress fluid under transient shear

scientific article published on 01 October 2019

Transitioning from underdamped to overdamped behavior in theory and in Langevin simulations of desorption of a particle from a Lennard-Jones potential

scientific article published in November 2021

Translational and rotational dynamics in dense suspensions of smooth and rough colloids

scientific article published on 4 December 2017

Unusual phase separation and rheological behavior of poly(ethylene oxide)/ionic liquid mixtures with specific interactions

scientific article published on 22 August 2016

Water channel formation and ion transport in linear and branched lipid bilayers

scientific article

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