List of works - Jens Kleinjung

A Gene Regulatory Network Balances Neural and Mesoderm Specification during Vertebrate Trunk Development

scientific article

A simple analytical formula to compute the residual Mutual Information between pairs of data vectors

article

An engineered photoswitchable mammalian pyruvate kinase

scientific article

An overview of multiple sequence alignment

scientific article

Coevolved Mutations Reveal Distinct Architectures for Two Core Proteins in the Bacterial Flagellar Motor

scientific article published on 12 November 2015

Conformational and metal-binding properties of androcam, a testis-specific, calmodulin-related protein from Drosophila

scientific article

Contact-based sequence alignment

scientific article

Decrypting Prion Protein Conversion into a β-Rich Conformer by Molecular Dynamics

scientific article published on 4 April 2013

Design and application of implicit solvent models in biomolecular simulations

scientific article published in April 2014

Detection of allosteric signal transmission by information-theoretic analysis of protein dynamics

scientific article published on 9 November 2011

Functional cross-talk between allosteric effects of activating and inhibiting ligands underlies PKM2 regulation

scientific article published on 2 July 2019

GSATools: analysis of allosteric communication and functional local motions using a structural alphabet

scientific article published on 05 June 2013

Genome editing reveals a role for OCT4 in human embryogenesis

scientific article

Homology-extended sequence alignment

scientific article

Implicit Solvation Parameters Derived from Explicit Water Forces in Large-Scale Molecular Dynamics Simulations

scientific article

In vitro generation of neuromesodermal progenitors reveals distinct roles for wnt signalling in the specification of spinal cord and paraxial mesoderm identity

scientific article

Interaction of malaria parasite-inhibitory antibodies with the merozoite surface protein MSP1(19) by computational docking

scientific article published on February 2007

Lineage-dependent spatial and functional organization of the mammalian enteric nervous system.

scientific article published in May 2017

Malaria parasite actin polymerization and filament structure

scientific article

MinSet: a general approach to derive maximally representative database subsets by using fragment dictionaries and its application to the SCOP database

scientific article published on 3 January 2007

POPS: A fast algorithm for solvent accessible surface areas at atomic and residue level

scientific article

POPSCOMP: an automated interaction analysis of biomolecular complexes

scientific article

Parallelized multiple alignment

scientific article published in September 2002

Plasticity of influenza haemagglutinin fusion peptides and their interaction with lipid bilayers

scientific article

Protein networks reveal detection bias and species consistency when analysed by information-theoretic methods

scientific article

STRIKE: evaluation of protein MSAs using a single 3D structure

scientific article published on 28 October 2011

Specific Conformational States of Ras GTPase upon Effector Binding

scientific article published on 6 November 2012

Structural alphabets derived from attractors in conformational space.

scientific article

Tailored graph ensembles as proxies or null models for real networks I: tools for quantifying structure

scientific article

Testing homology with Contact Accepted mutatiOn (CAO): a contact-based Markov model of protein evolution

scientific article

The Phylogenetic Signature Underlying ATP Synthase c-Ring Compliance

scientific article

The TAB1-p38α complex aggravates myocardial injury and can be targeted by small molecules

scientific article published on 23 August 2018

The crystal structure of the human titin:obscurin complex reveals a conserved yet specific muscle M-band zipper module

scientific article

Thermal unfolding simulations of apo-calmodulin using leap-dynamics

scientific article published in March 2003

Urea–Water Solvation Forces on Prion Structures ⬇️

scientific article published on August 14, 2012

List of works by Jens Kleinjung

A Gene Regulatory Network Balances Neural and Mesoderm Specification during Vertebrate Trunk Development

A simple analytical formula to compute the residual Mutual Information between pairs of data vectors

An engineered photoswitchable mammalian pyruvate kinase

An overview of multiple sequence alignment

Coevolved Mutations Reveal Distinct Architectures for Two Core Proteins in the Bacterial Flagellar Motor

Conformational and metal-binding properties of androcam, a testis-specific, calmodulin-related protein from Drosophila

Contact-based sequence alignment

Decrypting Prion Protein Conversion into a β-Rich Conformer by Molecular Dynamics

Design and application of implicit solvent models in biomolecular simulations

Detection of allosteric signal transmission by information-theoretic analysis of protein dynamics

Functional cross-talk between allosteric effects of activating and inhibiting ligands underlies PKM2 regulation

GSATools: analysis of allosteric communication and functional local motions using a structural alphabet

Genome editing reveals a role for OCT4 in human embryogenesis

Homology-extended sequence alignment

Implicit Solvation Parameters Derived from Explicit Water Forces in Large-Scale Molecular Dynamics Simulations

In vitro generation of neuromesodermal progenitors reveals distinct roles for wnt signalling in the specification of spinal cord and paraxial mesoderm identity

Interaction of malaria parasite-inhibitory antibodies with the merozoite surface protein MSP1(19) by computational docking

Lineage-dependent spatial and functional organization of the mammalian enteric nervous system.

Malaria parasite actin polymerization and filament structure

MinSet: a general approach to derive maximally representative database subsets by using fragment dictionaries and its application to the SCOP database

POPS: A fast algorithm for solvent accessible surface areas at atomic and residue level

POPSCOMP: an automated interaction analysis of biomolecular complexes

Parallelized multiple alignment

Plasticity of influenza haemagglutinin fusion peptides and their interaction with lipid bilayers

Protein networks reveal detection bias and species consistency when analysed by information-theoretic methods

STRIKE: evaluation of protein MSAs using a single 3D structure

Specific Conformational States of Ras GTPase upon Effector Binding

Structural alphabets derived from attractors in conformational space.

Tailored graph ensembles as proxies or null models for real networks I: tools for quantifying structure

Testing homology with Contact Accepted mutatiOn (CAO): a contact-based Markov model of protein evolution

The Phylogenetic Signature Underlying ATP Synthase c-Ring Compliance

The TAB1-p38α complex aggravates myocardial injury and can be targeted by small molecules

The crystal structure of the human titin:obscurin complex reveals a conserved yet specific muscle M-band zipper module

Thermal unfolding simulations of apo-calmodulin using leap-dynamics

Urea–Water Solvation Forces on Prion Structures ⬇️