List of works - Julius B Lucks

A ligand-gated strand displacement mechanism for ZTP riboswitch transcription control

scientific article published on 21 October 2019

Achieving large dynamic range control of gene expression with a compact RNA transcription-translation regulator

scientific article published on 6 April 2017

Cell-free biosensors for rapid detection of water contaminants

scientific article published on 06 July 2020

Characterizing the Structure-Function Relationship of a Naturally Occurring RNA Thermometer.

scientific article published on 27 November 2017

Chemical roadblocking of DNA transcription for nascent RNA display

scientific article published on 24 March 2020

Computational design of small transcription activating RNAs for versatile and dynamic gene regulation

scientific article published on 19 October 2017

Cotranscriptional folding of a riboswitch at nucleotide resolution.

scientific article

DUETT quantitatively identifies known and novel events in nascent RNA structural dynamics from chemical probing data

scientific article published on 01 December 2019

De novo-designed translation-repressing riboregulators for multi-input cellular logic

scientific article published on 04 November 2019

Deconstructing Cell-Free Extract Preparation for in Vitro Activation of Transcriptional Genetic Circuitry

scientific article published on 29 January 2019

Design and Optimization of a Cell-Free Atrazine Biosensor

scientific article published on 03 March 2020

Design of a Transcriptional Biosensor for the Portable, On-Demand Detection of Cyanuric Acid

scientific article published on 26 December 2019

Distinct timescales of RNA regulators enable the construction of a genetic pulse generator

scientific article published on 04 February 2019

Distributed biotin-streptavidin transcription roadblocks for mapping cotranscriptional RNA folding

scientific article

Elements of RNA Design

scientific article published on 15 November 2018

Engineering a Functional Small RNA Negative Autoregulation Network with Model-Guided Design

scientific article published on 22 May 2018

High-throughput determination of RNA structures

scientific article published on 01 October 2018

Mathematical Modeling of RNA-Based Architectures for Closed Loop Control of Gene Expression

scientific article published on 08 May 2018

Organism Engineering for the Bioproduction of the Triaminotrinitrobenzene (TATB) Precursor Phloroglucinol (PG)

scientific article published on 12 December 2019

PLANT-Dx: A Molecular Diagnostic for Point-of-Use Detection of Plant Pathogens

article

Point-of-Use Detection of Environmental Fluoride via a Cell-Free Riboswitch-Based Biosensor

scientific article published on 20 December 2019

Probing of RNA structures in a positive sense RNA virus reveals selection pressures for structural elements

scientific article published on 23 December 2017

Programming cell-free biosensors with DNA strand displacement circuits

scientific article published on 17 February 2022

RNA systems biology: uniting functional discoveries and structural tools to understand global roles of RNAs

scientific article

Tracking RNA structures as RNAs transit through the cell

scientific article published on 01 April 2019

Using in-cell SHAPE-Seq and simulations to probe structure-function design principles of RNA transcriptional regulators.

scientific article published on 21 April 2016

List of works by Julius B Lucks

A ligand-gated strand displacement mechanism for ZTP riboswitch transcription control

Achieving large dynamic range control of gene expression with a compact RNA transcription-translation regulator

Cell-free biosensors for rapid detection of water contaminants

Characterizing the Structure-Function Relationship of a Naturally Occurring RNA Thermometer.

Chemical roadblocking of DNA transcription for nascent RNA display

Computational design of small transcription activating RNAs for versatile and dynamic gene regulation

Cotranscriptional folding of a riboswitch at nucleotide resolution.

DUETT quantitatively identifies known and novel events in nascent RNA structural dynamics from chemical probing data

De novo-designed translation-repressing riboregulators for multi-input cellular logic

Deconstructing Cell-Free Extract Preparation for in Vitro Activation of Transcriptional Genetic Circuitry

Design and Optimization of a Cell-Free Atrazine Biosensor

Design of a Transcriptional Biosensor for the Portable, On-Demand Detection of Cyanuric Acid

Distinct timescales of RNA regulators enable the construction of a genetic pulse generator

Distributed biotin-streptavidin transcription roadblocks for mapping cotranscriptional RNA folding

Elements of RNA Design

Engineering a Functional Small RNA Negative Autoregulation Network with Model-Guided Design

High-throughput determination of RNA structures

Mathematical Modeling of RNA-Based Architectures for Closed Loop Control of Gene Expression

Organism Engineering for the Bioproduction of the Triaminotrinitrobenzene (TATB) Precursor Phloroglucinol (PG)

PLANT-Dx: A Molecular Diagnostic for Point-of-Use Detection of Plant Pathogens

Point-of-Use Detection of Environmental Fluoride via a Cell-Free Riboswitch-Based Biosensor

Probing of RNA structures in a positive sense RNA virus reveals selection pressures for structural elements

Programming cell-free biosensors with DNA strand displacement circuits

RNA systems biology: uniting functional discoveries and structural tools to understand global roles of RNAs

Tracking RNA structures as RNAs transit through the cell

Using in-cell SHAPE-Seq and simulations to probe structure-function design principles of RNA transcriptional regulators.