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List of works by Michael T. Wolfinger

BarMap: RNA folding on dynamic energy landscapes

scientific article

Biophysical characterisation of human LincRNA-p21 sense and antisense Alu inverted repeats

scientific article published on 01 June 2022

Corrigendum: Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells

scientific article

Cross-regulation by CrcZ RNA controls anoxic biofilm formation in Pseudomonas aeruginosa

scientific article published on 21 December 2016

Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells

scientific article

Discoveries of Exoribonuclease-Resistant Structures of Insect-Specific Flaviviruses Isolated in Zambia

scientific article published on 11 September 2020

Efficient computation of RNA folding dynamics

article

Efficient computation of co-transcriptional RNA-ligand interaction dynamics

scholarly article by Michael T. Wolfinger published in July 2018

Exploring the lower part of discrete polymer model energy landscapes

article

Folding kinetics of large RNAs

scientific article published on 6 March 2008

Functional RNA Structures in the 3'UTR of Tick-Borne, Insect-Specific and No-Known-Vector Flaviviruses

scientific article published on 24 March 2019

General and MicroRNA-Mediated mRNA Degradation Occurs on Ribosome Complexes in Drosophila Cells

scientific article published on 27 April 2015

Genomic epidemiology of superspreading events in Austria reveals mutational dynamics and transmission properties of SARS-CoV-2

scientific article published on 23 November 2020

In silico design of ligand triggered RNA switches

scientific article published on 13 April 2018

Indications for a moonlighting function of translation factor aIF5A in the crenarchaeum Sulfolobus solfataricus

scientific article published on 05 March 2019

Insights into the secondary and tertiary structure of the Bovine Viral Diarrhea Virus Internal Ribosome Entry Site

scientific article published on 31 December 2021

Interplay between the catabolite repression control protein Crc, Hfq and RNA in Hfq-dependent translational regulation in Pseudomonas aeruginosa

scientific article

Memory-efficient RNA energy landscape exploration ⬇️

scientific article

Musashi binding elements in Zika and related Flavivirus 3'UTRs: A comparative study in silico

scientific article published on 06 May 2019

NMR structural profiling of transcriptional intermediates reveals riboswitch regulation by metastable RNA conformations

scientific article

Predicting RNA secondary structures from sequence and probing data

scientific article

RNASeq Based Transcriptional Profiling of Pseudomonas aeruginosa PA14 after Short- and Long-Term Anoxic Cultivation in Synthetic Cystic Fibrosis Sputum Medium

scientific article published on 28 January 2016

SHAPE directed RNA folding

scientific article published on 9 September 2015

TERribly Difficult: Searching for Telomerase RNAs in Saccharomycetes

article

TERribly Difficult: Searching for Telomerase RNAs in Saccharomycetes

TSSAR: TSS annotation regime for dRNA-seq data

scientific article

The MazF-regulon: a toolbox for the post-transcriptional stress response in Escherichia coli.

scientific article published on 22 February 2016

The SmAP1/2 proteins of the crenarchaeon Sulfolobus solfataricus interact with the exosome and stimulate A-rich tailing of transcripts

scientific article published on 18 May 2017

Transcriptome-wide effects of inverted SINEs on gene expression and their impact on RNA polymerase II activity.

scientific article published on 25 October 2016

Updated Phylogeny of Chikungunya Virus Suggests Lineage-Specific RNA Architecture

scientific article published on 29 August 2019

ViennaNGS: A toolbox for building efficient next- generation sequencing analysis pipelines

scientific article

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