List of works - Elizabeth J. Tran

Characterization of the mammalian DEAD-box protein DDX5 reveals functional conservation with S. cerevisiae ortholog Dbp2 in transcriptional control and glucose metabolism.

scientific article published on 14 April 2017

DDX5 helicase resolves G-quadruplex and is involved in MYC gene transcriptional activation

scientific article published on 23 September 2019

Dynamic nuclear pore complexes: life on the edge.

scientific article published on June 2006

Evolutionary origins of the RNA-guided nucleotide-modification complexes: from the primitive translation apparatus?

scientific article published in July 2004

Genome-Wide Discovery of DEAD-Box RNA Helicase Targets Reveals RNA Structural Remodeling in Transcription Termination

scientific article published on 22 March 2019

Inositol hexakisphosphate and Gle1 activate the DEAD-box protein Dbp5 for nuclear mRNA export

scientific article

Large-Scale Analysis of Kinase Signaling in Yeast Pseudohyphal Development Identifies Regulation of Ribonucleoprotein Granules.

scientific article published on 8 October 2015

LncRNAs: Bridging environmental sensing and gene expression

scientific article published on 4 October 2016

Long noncoding RNAs promote transcriptional poising of inducible genes.

scientific article

Macromolecular transport between the nucleus and the cytoplasm: Advances in mechanism and emerging links to disease

scientific article

Measuring helicase inhibition of the DEAD-box protein Dbp2 by Yra1.

scientific article published on January 2015

Metabolic Adaptation to Nutrients Involves Coregulation of Gene Expression by the RNA Helicase Dbp2 and the Cyc8 Corepressor in Saccharomyces cerevisiae

scientific article

RNA helicase DEAD box protein 5 regulates Polycomb repressive complex 2/Hox transcript antisense intergenic RNA function in hepatitis B virus infection and hepatocarcinogenesis

scientific article published on 23 June 2016

Recognition of polyadenosine RNA by the zinc finger domain of nuclear poly(A) RNA-binding protein 2 (Nab2) is required for correct mRNA 3'-end formation.

scientific article published on 16 June 2010

Recruitment, Duplex Unwinding and Protein-Mediated Inhibition of the Dead-Box RNA Helicase Dbp2 at Actively Transcribed Chromatin

scientific article published on 11 February 2016

Regulated Formation of lncRNA-DNA Hybrids Enables Faster Transcriptional Induction and Environmental Adaptation

scientific article published on 27 January 2016

Regulated Formation of lncRNA-DNA Hybrids Enables Faster Transcriptional Induction and Environmental Adaptation

scientific article published on 01 April 2016

Regulation of glucose-dependent gene expression by the RNA helicase Dbp2 in Saccharomyces cerevisiae.

scientific article

SAC3B, a central component of the mRNA export complex TREX-2, is required for prevention of epigenetic gene silencing in Arabidopsis.

scientific article published on 26 September 2016

Sequential 2′-O-Methylation of Archaeal Pre-tRNATrpNucleotides Is Guided by the Intron-encoded buttrans-Acting Box C/D Ribonucleoprotein of Pre-tRNA

scientific article published in Journal of Biological Chemistry

SnapShot: nuclear transport

scientific article published in October 2007

The DEAD-box RNA helicase Dbp2 connects RNA quality control with repression of aberrant transcription

scientific article

The DEAD-box protein Dbp2 functions with the RNA-binding protein Yra1 to promote mRNP assembly

scientific article

The DEAD-box protein Dbp5 controls mRNA export by triggering specific RNA:protein remodeling events

scientific article

The Dbp5 cycle at the nuclear pore complex during mRNA export I: dbp5 mutants with defects in RNA binding and ATP hydrolysis define key steps for Nup159 and Gle1

scientific article published on May 2011

The Dbp5 cycle at the nuclear pore complex during mRNA export II: nucleotide cycling and mRNP remodeling by Dbp5 are controlled by Nup159 and Gle1

scientific article

The RNA helicase DDX5 supports mitochondrial function in small cell lung cancer

scientific article published on 06 May 2020

The balancing act of R-loop biology: The good, the bad, and the ugly

scientific article published on 16 December 2019

The coiled-coil domain of the Nop56/58 core protein is dispensable for sRNP assembly but is critical for archaeal box C/D sRNP-guided nucleotide methylation

scientific article published on 6 April 2006

The crystal structure of the Methanocaldococcus jannaschii multifunctional L7Ae RNA-binding protein reveals an induced-fit interaction with the box C/D RNAs

scientific article published in July 2005

The mRNA export factor Gle1 and inositol hexakisphosphate regulate distinct stages of translation

scientific article

The mitogen-activated protein kinase Slt2 regulates nuclear retention of non-heat shock mRNAs during heat shock-induced stress

scientific article

Unexpected functions of lncRNAs in gene regulation.

scientific article

List of works by Elizabeth J. Tran

Characterization of the mammalian DEAD-box protein DDX5 reveals functional conservation with S. cerevisiae ortholog Dbp2 in transcriptional control and glucose metabolism.

DDX5 helicase resolves G-quadruplex and is involved in MYC gene transcriptional activation

Dynamic nuclear pore complexes: life on the edge.

Evolutionary origins of the RNA-guided nucleotide-modification complexes: from the primitive translation apparatus?

Genome-Wide Discovery of DEAD-Box RNA Helicase Targets Reveals RNA Structural Remodeling in Transcription Termination

Inositol hexakisphosphate and Gle1 activate the DEAD-box protein Dbp5 for nuclear mRNA export

Large-Scale Analysis of Kinase Signaling in Yeast Pseudohyphal Development Identifies Regulation of Ribonucleoprotein Granules.

LncRNAs: Bridging environmental sensing and gene expression

Long noncoding RNAs promote transcriptional poising of inducible genes.

Macromolecular transport between the nucleus and the cytoplasm: Advances in mechanism and emerging links to disease

Measuring helicase inhibition of the DEAD-box protein Dbp2 by Yra1.

Metabolic Adaptation to Nutrients Involves Coregulation of Gene Expression by the RNA Helicase Dbp2 and the Cyc8 Corepressor in Saccharomyces cerevisiae

RNA helicase DEAD box protein 5 regulates Polycomb repressive complex 2/Hox transcript antisense intergenic RNA function in hepatitis B virus infection and hepatocarcinogenesis

Recognition of polyadenosine RNA by the zinc finger domain of nuclear poly(A) RNA-binding protein 2 (Nab2) is required for correct mRNA 3'-end formation.

Recruitment, Duplex Unwinding and Protein-Mediated Inhibition of the Dead-Box RNA Helicase Dbp2 at Actively Transcribed Chromatin

Regulated Formation of lncRNA-DNA Hybrids Enables Faster Transcriptional Induction and Environmental Adaptation

Regulated Formation of lncRNA-DNA Hybrids Enables Faster Transcriptional Induction and Environmental Adaptation

Regulation of glucose-dependent gene expression by the RNA helicase Dbp2 in Saccharomyces cerevisiae.

SAC3B, a central component of the mRNA export complex TREX-2, is required for prevention of epigenetic gene silencing in Arabidopsis.

Sequential 2′-O-Methylation of Archaeal Pre-tRNATrpNucleotides Is Guided by the Intron-encoded buttrans-Acting Box C/D Ribonucleoprotein of Pre-tRNA

SnapShot: nuclear transport

The DEAD-box RNA helicase Dbp2 connects RNA quality control with repression of aberrant transcription

The DEAD-box protein Dbp2 functions with the RNA-binding protein Yra1 to promote mRNP assembly

The DEAD-box protein Dbp5 controls mRNA export by triggering specific RNA:protein remodeling events

The Dbp5 cycle at the nuclear pore complex during mRNA export I: dbp5 mutants with defects in RNA binding and ATP hydrolysis define key steps for Nup159 and Gle1

The Dbp5 cycle at the nuclear pore complex during mRNA export II: nucleotide cycling and mRNP remodeling by Dbp5 are controlled by Nup159 and Gle1

The RNA helicase DDX5 supports mitochondrial function in small cell lung cancer

The balancing act of R-loop biology: The good, the bad, and the ugly

The coiled-coil domain of the Nop56/58 core protein is dispensable for sRNP assembly but is critical for archaeal box C/D sRNP-guided nucleotide methylation

The crystal structure of the Methanocaldococcus jannaschii multifunctional L7Ae RNA-binding protein reveals an induced-fit interaction with the box C/D RNAs

The mRNA export factor Gle1 and inositol hexakisphosphate regulate distinct stages of translation

The mitogen-activated protein kinase Slt2 regulates nuclear retention of non-heat shock mRNAs during heat shock-induced stress

Unexpected functions of lncRNAs in gene regulation.