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List of works by Ripan S. Malhi

2015 Gabriel W. Lasker Award

scientific article published in October 2016

4040 SNPs for genomic analysis in the rhesus macaque (Macaca mulatta)

scientific article published on 31 August 2011

A South American Prehistoric Mitogenome: Context, Continuity, and the Origin of Haplogroup C1d

scientific article published in 2015

A comparison of proteomic, genomic, and osteological methods of archaeological sex estimation

scientific article published on 17 July 2020

A time transect of exomes from a Native American population before and after European contact

scientific article (publication date: 15 November 2016)

ANÁLISIS DEL GENOMA MITOCONDRIAL DE DOS INDIVIDUOS INHUMADOS EN EL SITIO ARQUEOLÓGICO CG14E01 “ISLA LARGA” (ROCHA, URUGUAY)

Advancing the ethics of paleogenomics

scientific article published in Science

Ancient DNA analysis of a nineteenth century tobacco pipe from a Maryland slave quarter

scientific article published in May 2019

Ancient DNA analysis of mid-holocene individuals from the Northwest Coast of North America reveals different evolutionary paths for mitogenomes

scientific article published on 3 July 2013

Ancient DNA suggests modern wolves trace their origin to a Late Pleistocene expansion from Beringia

scientific article published on 16 December 2019

Ancient human parallel lineages within North America contributed to a coastal expansion

scientific article published in Science

Ancient individuals from the North American Northwest Coast reveal 10,000 years of regional genetic continuity

scientific article

Ancient individuals from the North American Northwest Coast reveal 10,000 years of regional genetic continuity

Anthropological Genetics

article

Anthropology. Response to Comment on "Late Pleistocene human skeleton and mtDNA link Paleoamericans and modern Native Americans".

scientific article published on February 2015

Arrival routes of first Americans uncertain

scientific article published in March 2018

Assessing the comparability of different DNA extraction and amplification methods in gut microbial community profiling

scientific article published on 28 August 2019

Beringian standstill and spread of Native American founders

scientific article published in 2007

Biological samples taken from Native American Ancestors are human remains under <scp>NAGPRA</scp>

scientific article published in 2023

Brief communication: Haplogroup X confirmed in prehistoric North America

scientific article published on 01 September 2002

Brief communication: mitochondrial haplotype C4c confirmed as a founding genome in the Americas

scientific article published in March 2010

Case Study on Ancestry Estimation in an Alaskan Native Family: Identity and Safeguards Against Reductionism

scientific article published in October 2015

Central Place Models of Acorn and Mussel Processing

article

Chaco Canyon Dig Unearths Ethical Concerns.

scientific article published in July 2017

Comparative and population mitogenomic analyses of Madagascar's extinct, giant 'subfossil' lemurs

scientific article published on 16 December 2014

Complete Mitochondrial Genome Sequencing of a Burial from a Romano-Christian Cemetery in the Dakhleh Oasis, Egypt: Preliminary Indications

scientific article published on 6 October 2017

Current evidence allows multiple models for the peopling of the Americas

scientific article published on 08 August 2018

DNA analysis of ancient dogs of the Americas: identifying possible founding haplotypes and reconstructing population histories.

scientific article

Demographic and immune-based selection shifts before and after European contact inferred from 50 ancient and modern exomes from the Northwest Coast of North America

Developing SNPs and STR DNA markers for snub-nosed monkeys (Rhinopithecus roxellana) using next-generation sequencing technology

Diversification of porcine MHC class II genes: evidence for selective advantage

article

ENGAGING NATIVE AMERICANS IN GENOMICS RESEARCH.

scientific article published on 04 December 2015

Early Americans: misstated results

scientific article

Early human dispersals within the Americas

scientific article published in Science

Engaging rural communities in genetic research: challenges and opportunities.

scientific article

Evaluating the Farming/Language Dispersal Hypothesis with genetic variation exhibited by populations in the Southwest and Mesoamerica.

scientific article

Evolutionary and phylogenetic insights from a nuclear genome sequence of the extinct, giant ‘subfossil’ koala lemur Megaladapis edwardsi

scientific article published on 17 October 2020

Evolutionary and phylogenetic insights from a nuclear genome sequence of the extinct, giant, “subfossil” koala lemur Megaladapis edwardsi

scientific article published on 23 June 2021

Genetic Structure and Diversity Among Historic and Modern Populations of the Sumatran Rhinoceros (Dicerorhinus sumatrensis)

scholarly article by Jessica R Brandt published in May 2018

Genetic Structure of First Nation Communities in the Pacific Northwest

scientific article

Genetic analysis of early holocene skeletal remains from Alaska and its implications for the settlement of the Americas

scientific article

Genotyping single nucleotide polymorphisms (SNPs) across species in Old World Monkeys

scientific article

Haplotypic background of a private allele at high frequency in the Americas.

scientific article published on 12 February 2009

High-throughput sequencing of fecal DNA to identify insects consumed by wild Weddell's saddleback tamarins (Saguinus weddelli, Cebidae, Primates) in Bolivia.

scientific article

High-throughput single-nucleotide polymorphism discovery and the search for candidate genes for long-term SIVmac nonprogression in Chinese rhesus macaques (Macaca mulatta)

scientific article

Implications of the Genographic Project for Molecular Anthropologists

Influence of fruit and invertebrate consumption on the gut microbiota of wild white-faced capuchins (Cebus capucinus).

scientific article published on 4 January 2018

Integrating feeding behavior, ecological data, and DNA barcoding to identify developmental differences in invertebrate foraging strategies in wild white-faced capuchins (Cebus capucinus).

scientific article

Integrative analysis of DNA, macroscopic remains and stable isotopes of dog coprolites to reconstruct community diet

scientific article published on 04 February 2021

Introduction: Providing a Venue for Influential Research in Anthropological Genomics

article by Ripan S. Malhi & Brian M. Kemp published 2014 in Human Biology

Isotopic and genetic analyses of a mass grave in central California: Implications for precontact hunter-gatherer warfare.

scientific article published on 2 September 2015

Late Pleistocene human skeleton and mtDNA link Paleoamericans and modern Native Americans

scientific article

Low Mitochondrial DNA Diversity in an Ancient Population from China: Insight into Social Organization at the Fujia Site

scientific article

Loxodonta Localizer: A Software Tool for Inferring the Provenance of African Elephants and Their Ivory Using Mitochondrial DNA

scientific article published on 01 November 2019

MamuSNP: a resource for Rhesus Macaque (Macaca mulatta) genomics

scientific article

Mitochondrial DNA and prehistoric settlements: native migrations on the western edge of North America

scientific article published in February 2004

Mitochondrial DNA evidence of an early Holocene population expansion of threespine sticklebacks from Scotland

article

Mitochondrial DNA studies of Native Americans: Conceptions and misconceptions of the population prehistory of the Americas

Mitochondrial haplogroup M discovered in prehistoric North Americans

Modern wolves trace their origin to a late Pleistocene expansion from Beringia

article published in 2018

Multiple Asian pig origins revealed through genomic analyses

scientific article published on 10 November 2009

Native American mtDNA prehistory in the American Southwest

scientific article published in February 2003

Opinion: Demystifying Native American genetic opposition to research

POPULATION GENETICS. Genomic evidence for the Pleistocene and recent population history of Native Americans

scientific article

Patterns of Genetic Coding Variation in a Native American Population before and after European Contact

scientific article published on 17 April 2018

Patterns of admixture and population structure in native populations of Northwest North America

scientific article

Patterns of genetic variation and the role of selection in HTR1A and HTR1B in macaques (Macaca)

scientific article

Patterns of mtDNA Diversity in Northwestern North America

scientific article (publication date: 2004)

Police Endorse Color-Blind Racial Beliefs More Than Laypersons

Population Structure Analyses Provide Insight into the Source Populations Underlying Rural Isolated Communities in Illinois

scientific article published on 01 February 2019

Population genetics of wild Macaca fascicularis with low-coverage shotgun sequencing of museum specimens

scientific article published on 08 July 2020

Providing a venue for influential research in anthropological genomics. Introduction

scientific article published in January 2014

Pyrosequencing as a method for SNP identification in the rhesus macaque (Macaca mulatta).

scientific article

Race and diversity in U.S. Biological Anthropology: A decade of AAPA initiatives

scientific article published in January 2018

Reconciling migration models to the Americas with the variation of North American native mitogenomes

scientific article published on 12 August 2013

Rights, interests and expectations: Indigenous perspectives on unrestricted access to genomic data

scientific article published on 06 April 2020

Species identification and mitochondrial genomes of ancient fish bones from the Riverine Kachemak tradition of the Kenai Peninsula, Alaska

scientific article published in 2018

Terminal Pleistocene Alaskan genome reveals first founding population of Native Americans.

scientific article

The ancestry and affiliations of Kennewick Man

scientific article

The effect of SNP discovery method and sample size on estimation of population genetic data for Chinese and Indian rhesus macaques (Macaca mulatta).

scientific article

The evolutionary history of SLC6A4 and the role of plasticity in Macaca

scientific article (publication date: April 2014)

The evolutionary history of dogs in the Americas

scientific article

The genome of a Late Pleistocene human from a Clovis burial site in western Montana

scientific article

The population history of northeastern Siberia since the Pleistocene

scientific article published on 05 June 2019

The structure of diversity within New World mitochondrial DNA haplogroups: implications for the prehistory of North America

scientific article (publication date: April 2002)

Tracing the phylogeographic history of Southeast Asian long-tailed macaques through mitogenomes of museum specimens

scientific article published on 29 August 2017

Uses and limitations of genetic data relating to Athapaskan migrations: a reply to Seymour

scientific article published in October 2009

Variance in disease risk: rural populations and genetic diversity.

scientific article

trnL outperforms rbcL as a DNA metabarcoding marker when compared with the observed plant component of the diet of wild white-faced capuchins (Cebus capucinus, Primates).

scientific article published on 26 June 2018

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