Search filters

List of works by Martin Däumer

A novel internally controlled real-time reverse transcription-PCR assay for HIV-1 RNA targeting the pol integrase genomic region

scientific article published on 26 February 2007

Analysis of immune selection as a potential cause for the presence of cleavage site mutation 431V in treatment-naive HIV type-1 isolates ⬇️

scientific article published on January 1, 2010

Compensatory mutations at the HIV cleavage sites p7/p1 and p1/p6-gag in therapy-naive and therapy-experienced patients.

scientific article published in January 2006

Computational methods for the design of effective therapies against drug resistant HIV strains

scientific article

Correlation between genotypic (V3 population sequencing) and phenotypic (Trofile ES) methods of characterizing co-receptor usage of HIV-1 from 200 treatment-naïve HIV patients screened for Study A4001078.

scientific article

Deep sequencing reveals mutagenic effects of ribavirin during monotherapy of hepatitis C virus genotype 1-infected patients

scientific article published on 27 March 2013

Error correction of next-generation sequencing data and reliable estimation of HIV quasispecies

scientific article

Estimating HIV evolutionary pathways and the genetic barrier to drug resistance

scientific article published on 28 April 2005

Evolution of protease inhibitor resistance in the gag and pol genes of HIV subtype G isolates

scientific article published on 29 April 2010

Evolution of raltegravir resistance during therapy.

scientific article published on 14 May 2009

Failure of Dolutegravir First-Line ART with Selection of Virus Carrying R263K and G118R

scientific article published on 01 August 2019

Full-length haplotype reconstruction to infer the structure of heterogeneous virus populations

scientific article

Functional domains of the human immunodeficiency virus type 1 Nef protein are conserved among different clades in Cameroon

scientific article published in October 2006

Geno2pheno: Estimating phenotypic drug resistance from HIV-1 genotypes

scientific article

Genotypic tropism testing by massively parallel sequencing: qualitative and quantitative analysis ⬇️

scientific article

HIV-1 persistent viremia is frequently followed by episodes of low-level viremia

scientific article published on 20 February 2017

HIV-1 tropism testing in subjects achieving undetectable HIV-1 RNA: diagnostic accuracy, viral evolution and compartmentalization

scientific article

HIV-GRADE: a publicly available, rules-based drug resistance interpretation algorithm integrating bioinformatic knowledge

scientific article published on 24 January 2012

Impact of the HIV-1 genetic background and HIV-1 population size on the evolution of raltegravir resistance

scientific article published on 5 January 2018

In-depth analysis of G-to-A hypermutation rate in HIV-1 env DNA induced by endogenous APOBEC3 proteins using massively parallel sequencing

scientific article published on 24 November 2010

Learning multiple evolutionary pathways from cross-sectional data

scientific article

Low-frequency drug-resistant HIV-1 and risk of virological failure to first-line NNRTI-based ART: a multicohort European case-control study using centralized ultrasensitive 454 pyrosequencing

scientific article

Methods for optimizing antiviral combination therapies

scientific article

Multicenter Evaluation of Two Next-Generation HIV-1 Quantitation Assays, Aptima Quant Dx and Cobas 6800, in Comparison to the RealTie HIV-1 Reference Assay

article

Next-generation sequencing to assess HIV tropism

scientific article published on September 2012

Predicting HIV coreceptor usage on the basis of genetic and clinical covariates.

scientific article published in January 2007

Predicting the response to combination antiretroviral therapy: retrospective validation of geno2pheno-THEO on a large clinical database

scientific article published in April 2009

Prediction of HIV-1 coreceptor usage (tropism) by sequence analysis using a genotypic approach

scientific article published on December 2011

Primary HIV drug resistance and efficacy of first-line antiretroviral therapy guided by resistance testing

scientific article published in April 2006

Rapid Rebound of a Preexisting CXCR4-tropic Human Immunodeficiency Virus Variant After Allogeneic Transplantation With CCR5 Δ32 Homozygous Stem Cells

scientific article published on 01 February 2019

Reactivation of an occult hepatitis B virus escape mutant in an anti-HBs positive, anti-HBc negative lymphoma patient

scientific article published on 28 November 2006

Read length versus depth of coverage for viral quasispecies reconstruction

scientific article

Selective pressures of HLA genotypes and antiviral therapy on human immunodeficiency virus type 1 sequence mutation at a population level

scientific article

Short communication: Different mutation patterns in subtype CRF06_cpx after mother-to-child transmission

scientific article published in November 2008

Short communication: selection of thymidine analogue resistance mutational patterns in children infected from a common HIV type 1 subtype G source

scientific article published in March 2010

Stable coreceptor usage of HIV in patients with ongoing treatment failure on HAART

scientific article published on 26 September 2006

Successful therapy of hepatitis B with tenofovir in HIV-infected patients failing previous adefovir and lamivudine treatment

scientific article published in November 2004

The L76V mutation in HIV-1 protease is potentially associated with hypersusceptibility to protease inhibitors Atazanavir and Saquinavir: is there a clinical advantage?

scientific article

Therapeutic Immune Recovery and Reduction of CXCR4-Tropic HIV-1.

scientific article

Trends of prevalence of primary HIV drug resistance in Germany

scientific article published on 22 August 2007

geno2pheno[ngs-freq]: a genotypic interpretation system for identifying viral drug resistance using next-generation sequencing data.

scientific article published in May 2018

Paulina is supported by:

About Paulina

Help