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List of works by Charu Ramakrishnan

A Genetically Defined Compartmentalized Striatal Direct Pathway for Negative Reinforcement

scientific article published on 10 September 2020

A Guide to Creating and Testing New INTRSECT Constructs.

scientific article published on 5 July 2017

A hypothalamus-habenula circuit controls aversion

scientific article published on 12 February 2019

A neuronal circuit for activating descending modulation of neuropathic pain

scientific article published on 09 September 2019

A unique population of ventral tegmental area neurons inhibits the lateral habenula to promote reward

scientific article

Amygdala circuitry mediating reversible and bidirectional control of anxiety

scientific article

An Open Resource for Non-human Primate Optogenetics

scientific article published on 12 October 2020

An optogenetic toolbox designed for primates

scientific article

Cardiogenic control of affective behavioural state

scientific article published on 01 March 2023

Cholinergic Interneurons Control Local Circuit Activity and Cocaine Conditioning ⬇️

scientific article published on December 17, 2010

Competition between engrams influences fear memory formation and recall.

scientific article published in July 2016

Comprehensive Dual- and Triple-Feature Intersectional Single-Vector Delivery of Diverse Functional Payloads to Cells of Behaving Mammals

scientific article published on 20 June 2020

Cortical layer-specific critical dynamics triggering perception

scientific article published on 18 July 2019

Crystal structure of the channelrhodopsin light-gated cation channel

scientific article

Crystal structure of the natural anion-conducting channelrhodopsin GtACR1

scientific article published in Nature

Deep brain optogenetics without intracranial surgery

scientific article published on 05 October 2020

Dendritic calcium signals in rhesus macaque motor cortex drive an optical brain-computer interface

scientific article

Development of an optogenetic toolkit for neural circuit dissection in squirrel monkeys.

scientific article

Developmental Dysfunction of VIP Interneurons Impairs Cortical Circuits

scientific article

Distinct Signaling by Ventral Tegmental Area Glutamate, GABA, and Combinatorial Glutamate-GABA Neurons in Motivated Behavior

scientific article published on 01 September 2020

Dopaminergic dynamics underlying sex-specific cocaine reward

scientific article published on 10 January 2017

Dynamics of retrieval strategies for remote memories

scientific article published on 20 October 2011

Endocannabinoid Modulation of Orbitostriatal Circuits Gates Habit Formation

scientific article

Excitation of Diverse Classes of Cholecystokinin Interneurons in the Basal Amygdala Facilitates Fear Extinction

scientific article published on 07 November 2019

Frequency-dependent, cell type-divergent signaling in the hippocamposeptal projection.

scientific article

Functional maturation of human neural stem cells in a 3D bioengineered brain model enriched with fetal brain-derived matrix

scientific article published on 29 November 2019

Gamma oscillations organize top-down signalling to hypothalamus and enable food seeking

scientific article published in February 2017

Genetically identified amygdala-striatal circuits for valence-specific behaviors

scientific article published on 18 October 2021

Genetically targeted chemical assembly of functional materials in living cells, tissues, and animals

scientific article published on 19 March 2020

Genetically targeted chemical assembly of polymers specifically localized extracellularly to surface membranes of living neurons

scientific article published on 09 August 2023

Global and local fMRI signals driven by neurons defined optogenetically by type and wiring

scientific article

High-speed interferometric imaging reveals dynamics of neuronal deformation during the action potential

scientific article published on 27 April 2020

Human pluripotent stem cell tools for cardiac optogenetics

scientific article

In Vivo Fiber Photometry Reveals Signature of Future Stress Susceptibility in Nucleus Accumbens

scientific article published on 07 June 2017

In vivo imaging identifies temporal signature of D1 and D2 medium spiny neurons in cocaine reward

scientific article

Interacting neural ensembles in orbitofrontal cortex for social and feeding behaviour

Investigating the feasibility of channelrhodopsin variants for nanoscale optogenetics

scientific article published on 01 January 2019

In Vivo Interrogation of Spinal Mechanosensory Circuits

scientific article published on November 2016

Lee et al. reply

scientific article published in Nature

Long-Range GABAergic Inputs Regulate Neural Stem Cell Quiescence and Control Adult Hippocampal Neurogenesis

scientific article published in November 2017

Mapping Brain-Wide Afferent Inputs of Parvalbumin-Expressing GABAergic Neurons in Barrel Cortex Reveals Local and Long-Range Circuit Motifs

scientific article published on 01 September 2019

Mapping projections of molecularly defined dopamine neuron subtypes using intersectional genetic approaches

scientific article published on 13 August 2018

Midbrain circuits for defensive behaviour

scientific article

Modulation of prefrontal cortex excitation/inhibition balance rescues social behavior in CNTNAP2-deficient mice.

scientific article published in August 2017

Molecular and Circuit-Dynamical Identification of Top-Down Neural Mechanisms for Restraint of Reward Seeking

scientific article

Molecular and cellular approaches for diversifying and extending optogenetics

scientific article

Molecular chaperones and subcellular trafficking of steroid receptors

scientific article published in April 1998

Neocortical excitation/inhibition balance in information processing and social dysfunction ⬇️

scientific article (publication date: 27 July 2011)

Nucleus accumbens D2R cells signal prior outcomes and control risky decision-making

scientific article published on 23 March 2016

Optogenetic Stimulation of Neural Grafts Enhances Neurotransmission and Downregulates the Inflammatory Response in Experimental Stroke Model

scientific article

Optogenetic and chemogenetic strategies for sustained inhibition of pain

scientific article published on 03 August 2016

Optogenetic approaches addressing extracellular modulation of neural excitability

scientific article published on 5 April 2016

Optogenetic delay of status epilepticus onset in an in vivo rodent epilepsy model

scientific article

Place field assembly distribution encodes preferred locations

scientific article published on 12 September 2017

Prefrontal cortical regulation of brainwide circuit dynamics and reward-related behavior

scientific article published on January 2016

Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins

scientific article

Projections from neocortex mediate top-down control of memory retrieval

scientific article

Publisher Correction: Development of an optogenetic toolkit for neural circuit dissection in squirrel monkeys

scientific article published on 05 December 2019

Rational Engineering of XCaMPs, a Multicolor GECI Suite for In Vivo Imaging of Complex Brain Circuit Dynamics

scientific article published on 09 May 2019

Recombinase-driver rat lines: tools, techniques, and optogenetic application to dopamine-mediated reinforcement

scientific article

Retrograde endocannabinoid signaling at inhibitory synapses in vivo

scientific article published on 29 February 2024

Reversible temporally-specific inhibition of muscle using a light-activated chloride channel

Scale-Invariant Visual Capabilities Explained by Topographic Representations of Luminance and Texture in Primate V1

scientific article published on 01 November 2018

Scale-Invariant Visual Capabilities Explained by Topographic Representations of Luminance and Texture in Primate V1.

scientific article published in December 2018

Serotonin engages an anxiety and fear-promoting circuit in the extended amygdala

scientific article published on 24 August 2016

Simultaneous fast measurement of circuit dynamics at multiple sites across the mammalian brain

scientific article published on 15 February 2016

Steroid hormone responsiveness of a family of closely related mouse proviral elements.

scientific article published on January 1997

Striosomes Mediate Value-Based Learning Vulnerable in Age and a Huntington's Disease Model

scientific article published on 21 October 2020

Structural and molecular interrogation of intact biological systems

scientific article (publication date: 16 May 2013)

Structural foundations of optogenetics: Determinants of channelrhodopsin ion selectivity

scientific article

Structural mechanisms of selectivity and gating in anion channelrhodopsins

scientific article published in Nature

Structure-guided transformation of channelrhodopsin into a light-activated chloride channel

scientific article

Targeting cells with single vectors using multiple-feature Boolean logic

scientific article (publication date: July 2014)

The central amygdala controls learning in the lateral amygdala

scientific article published on 23 October 2017

Thirst-associated preoptic neurons encode an aversive motivational drive.

scientific article

Three-dimensional intact-tissue sequencing of single-cell transcriptional states

scientific article

Two genetically, anatomically and functionally distinct cell types segregate across anteroposterior axis of paraventricular thalamus

scientific article published on 13 January 2020

Two-photon optogenetic toolbox for fast inhibition, excitation and bistable modulation

scientific article

Virally mediated optogenetic excitation and inhibition of pain in freely moving nontransgenic mice

scientific article

Visualizing hypothalamic network dynamics for appetitive and consummatory behaviors

scientific article

Wiring and Molecular Features of Prefrontal Ensembles Representing Distinct Experiences

scientific article published on 25 May 2016

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