List of works - Kenji Sugase

Backbone and side-chain resonance assignments of the methyl-CpG-binding domain of MBD6 from Arabidopsis thaliana

scientific article published on 21 September 2018

Backbone assignments of the apo and Zn(II) protoporphyrin IX-bound states of the soluble form of rat heme oxygenase-1.

scientific article

Backbone resonance assignments of monomeric SOD1 in dilute and crowded environments

scientific article published on 26 December 2016

Biological and Physicochemical Functions of Ubiquitylation Revealed by Synthetic Chemistry Approaches.

scientific article

Boosting protein dynamics studies using quantitative nonuniform sampling NMR spectroscopy.

scientific article published in November 2011

Calcitonin in a protochordate, Ciona intestinalis--the prototype of the vertebrate calcitonin/calcitonin gene-related peptide superfamily

scientific article published on 01 August 2009

Conformational propensities of intrinsically disordered proteins influence the mechanism of binding and folding

scientific article

Designing analogues of mini atrial natriuretic peptide based on structural analysis by NMR and restrained molecular dynamics

scientific article published on 01 February 2002

Distal regulation of heme binding of heme oxygenase-1 mediated by conformational fluctuations

scientific article

Dual Function of Phosphoubiquitin in E3 Activation of Parkin.

scientific article published on 9 June 2016

Dynamic changes in CCAN organization through CENP-C during cell-cycle progression

scientific article

Dynamics of the Extended String-Like Interaction of TFIIE with the p62 Subunit of TFIIH

scientific article

Effects of Weak Nonspecific Interactions with ATP on Proteins

scientific article from 2021

Efficient identification and analysis of chemical exchange in biomolecules by R1ρ relaxation dispersion with Amaterasu

scientific article published on 8 April 2016

Elucidating slow binding kinetics of a protein without observable bound resonances by longitudinal relaxation NMR spectroscopy

scientific article published on 28 May 2011

Elucidation of potential sites for antibody engineering by fluctuation editing

scientific article published on 30 August 2017

Exploration of the Conformational Dynamics of Major Histocompatibility Complex Molecules

scientific article

Extracting protein dynamics information from overlapped NMR signals using relaxation dispersion difference NMR spectroscopy.

scientific article

F 1 F 2-selective NMR spectroscopy.

scientific article

Fast and accurate fitting of relaxation dispersion data using the flexible software package GLOVE.

scientific article

Haem-dependent dimerization of PGRMC1/Sigma-2 receptor facilitates cancer proliferation and chemoresistance

scientific article published on 18 March 2016

High-Sensitivity Rheo-NMR Spectroscopy for Protein Studies.

scientific article

Hydrogen-Deuterium Exchange Profiles of Polyubiquitin Fibrils.

scientific article published on 27 February 2018

Isolation and characterization of a minimal building block of polyubiquitin fibrils

scientific article published on 9 February 2018

Lipopolysaccharide induces raft domain expansion in membrane composed of a phospholipid-cholesterol-sphingomyelin ternary system

scientific article published on 23 April 2010

Mechanism of coupled folding and binding of an intrinsically disordered protein

scientific article published on 23 May 2007

NMR resonance assignments of the NZF domain of mouse HOIL-1L free and bound to linear di-ubiquitin

scientific article published on 19 December 2018

Overexpression of post-translationally modified peptides in Escherichia coli by co-expression with modifying enzymes

scientific article

Peptide-dependent conformational fluctuation determines the stability of the human leukocyte antigen class I complex.

scientific article published on 15 July 2014

Pinpoint analysis of a protein in slow exchange using F1F2-selective ZZ-exchange spectroscopy: assignment and kinetic analysis

scientific article published on 01 April 2020

Practical considerations for investigation of protein conformational dynamics by 15N R 1ρ relaxation dispersion.

scientific article

Quantitative analysis of location- and sequence-dependent deamination by APOBEC3G using real-time NMR spectroscopy

scientific article published on 29 January 2014

Quantitative analysis of protein-ligand interactions by NMR.

scientific article

Quantitative monitoring of ubiquitination/deubiquitination reaction cycles by 18O-incorporation

scientific article published on 01 July 2020

Real-Time Observation of the Interaction between Thioflavin T and an Amyloid Protein by Using High-Sensitivity Rheo-NMR.

scientific article published on 28 October 2017

Restriction of a peptide turn conformation and conformational analysis of guanidino group using arginine-proline fused amino acids: application to mini atrial natriuretic peptide on binding to the receptor.

scientific article

Revealing the peptide presenting process of human leukocyte antigen through the analysis of fluctuation

scientific article

Solid-state NMR spectra of lipid-anchored proteins under magic angle spinning.

scientific article

Solution Structure of the Ubiquitin-associated (UBA) Domain of Human Autophagy Receptor NBR1 and Its Interaction with Ubiquitin and Polyubiquitin

scientific article

Solution structure of IsTX. A male scorpion toxin from Opisthacanthus madagascariensis (Ischnuridae).

scientific article

Solution structure of agelenin, an insecticidal peptide isolated from the spider Agelena opulenta, and its structural similarities to insect-specific calcium channel inhibitors

scientific article

Solution structure of the Q41N variant of ubiquitin as a model for the alternatively folded N2 state of ubiquitin

scientific article

Structural and thermodynamic basis for the recognition of the substrate-binding cleft on hen egg lysozyme by a single-domain antibody

scientific article published on 29 October 2019

Structural element responsible for the Fe(III)-phytosiderophore specific transport by HvYS1 transporter in barley

scientific article published on 13 August 2007

Structure-activity relationships for mini atrial natriuretic peptide by proline-scanning mutagenesis and shortening of peptide backbone

scientific article published in May 2002

Tailoring relaxation dispersion experiments for fast-associating protein complexes

scientific article published on 13 October 2007

The helical propensity of the extracellular loop is responsible for the substrate specificity of Fe(III)-phytosiderophore transporters.

scientific article published on 11 November 2016

The monomer-seed interaction mechanism in the formation of the β2-microglobulin amyloid fibril clarified by solution NMR techniques

scientific article published on 6 June 2012

Ubiquitylation Directly Induces Fold Destabilization of Proteins

scientific article published on 19 December 2016

Use of glass capillaries to suppress thermal convection in NMR tubes in diffusion measurements.

scientific article published on 12 April 2016

[Applications of relaxation dispersion spectroscopy]

scientific article published on 01 August 2008

[Intrinsically disordered protein and encounter complex]

scientific article published on 01 August 2007

List of works by Kenji Sugase

Backbone and side-chain resonance assignments of the methyl-CpG-binding domain of MBD6 from Arabidopsis thaliana

Backbone assignments of the apo and Zn(II) protoporphyrin IX-bound states of the soluble form of rat heme oxygenase-1.

Backbone resonance assignments of monomeric SOD1 in dilute and crowded environments

Biological and Physicochemical Functions of Ubiquitylation Revealed by Synthetic Chemistry Approaches.

Boosting protein dynamics studies using quantitative nonuniform sampling NMR spectroscopy.

Calcitonin in a protochordate, Ciona intestinalis--the prototype of the vertebrate calcitonin/calcitonin gene-related peptide superfamily

Conformational propensities of intrinsically disordered proteins influence the mechanism of binding and folding

Designing analogues of mini atrial natriuretic peptide based on structural analysis by NMR and restrained molecular dynamics

Distal regulation of heme binding of heme oxygenase-1 mediated by conformational fluctuations

Dual Function of Phosphoubiquitin in E3 Activation of Parkin.

Dynamic changes in CCAN organization through CENP-C during cell-cycle progression

Dynamics of the Extended String-Like Interaction of TFIIE with the p62 Subunit of TFIIH

Effects of Weak Nonspecific Interactions with ATP on Proteins

Efficient identification and analysis of chemical exchange in biomolecules by R1ρ relaxation dispersion with Amaterasu

Elucidating slow binding kinetics of a protein without observable bound resonances by longitudinal relaxation NMR spectroscopy

Elucidation of potential sites for antibody engineering by fluctuation editing

Exploration of the Conformational Dynamics of Major Histocompatibility Complex Molecules

Extracting protein dynamics information from overlapped NMR signals using relaxation dispersion difference NMR spectroscopy.

F 1 F 2-selective NMR spectroscopy.

Fast and accurate fitting of relaxation dispersion data using the flexible software package GLOVE.

Haem-dependent dimerization of PGRMC1/Sigma-2 receptor facilitates cancer proliferation and chemoresistance

High-Sensitivity Rheo-NMR Spectroscopy for Protein Studies.

Hydrogen-Deuterium Exchange Profiles of Polyubiquitin Fibrils.

Isolation and characterization of a minimal building block of polyubiquitin fibrils

Lipopolysaccharide induces raft domain expansion in membrane composed of a phospholipid-cholesterol-sphingomyelin ternary system

Mechanism of coupled folding and binding of an intrinsically disordered protein

NMR resonance assignments of the NZF domain of mouse HOIL-1L free and bound to linear di-ubiquitin

Overexpression of post-translationally modified peptides in Escherichia coli by co-expression with modifying enzymes

Peptide-dependent conformational fluctuation determines the stability of the human leukocyte antigen class I complex.

Pinpoint analysis of a protein in slow exchange using F1F2-selective ZZ-exchange spectroscopy: assignment and kinetic analysis

Practical considerations for investigation of protein conformational dynamics by 15N R 1ρ relaxation dispersion.

Quantitative analysis of location- and sequence-dependent deamination by APOBEC3G using real-time NMR spectroscopy

Quantitative analysis of protein-ligand interactions by NMR.

Quantitative monitoring of ubiquitination/deubiquitination reaction cycles by 18O-incorporation

Real-Time Observation of the Interaction between Thioflavin T and an Amyloid Protein by Using High-Sensitivity Rheo-NMR.

Restriction of a peptide turn conformation and conformational analysis of guanidino group using arginine-proline fused amino acids: application to mini atrial natriuretic peptide on binding to the receptor.

Revealing the peptide presenting process of human leukocyte antigen through the analysis of fluctuation

Solid-state NMR spectra of lipid-anchored proteins under magic angle spinning.

Solution Structure of the Ubiquitin-associated (UBA) Domain of Human Autophagy Receptor NBR1 and Its Interaction with Ubiquitin and Polyubiquitin

Solution structure of IsTX. A male scorpion toxin from Opisthacanthus madagascariensis (Ischnuridae).

Solution structure of agelenin, an insecticidal peptide isolated from the spider Agelena opulenta, and its structural similarities to insect-specific calcium channel inhibitors

Solution structure of the Q41N variant of ubiquitin as a model for the alternatively folded N2 state of ubiquitin

Structural and thermodynamic basis for the recognition of the substrate-binding cleft on hen egg lysozyme by a single-domain antibody

Structural element responsible for the Fe(III)-phytosiderophore specific transport by HvYS1 transporter in barley

Structure-activity relationships for mini atrial natriuretic peptide by proline-scanning mutagenesis and shortening of peptide backbone

Tailoring relaxation dispersion experiments for fast-associating protein complexes

The helical propensity of the extracellular loop is responsible for the substrate specificity of Fe(III)-phytosiderophore transporters.

The monomer-seed interaction mechanism in the formation of the β2-microglobulin amyloid fibril clarified by solution NMR techniques

Ubiquitylation Directly Induces Fold Destabilization of Proteins

Use of glass capillaries to suppress thermal convection in NMR tubes in diffusion measurements.

[Applications of relaxation dispersion spectroscopy]

[Intrinsically disordered protein and encounter complex]