List of works - Adil Mardinoglu

A genome-wide transcriptomic analysis of protein-coding genes in human blood cells

scientific article published on 01 December 2019

A pathology atlas of the human cancer transcriptome

scientific article

A subcellular map of the human proteome

scientific article

Adipose tissue morphology, imaging and metabolomics predicting cardiometabolic risk and family history of type 2 diabetes in non-obese men

scientific article published on 19 June 2020

An Integrated Understanding of the Rapid Metabolic Benefits of a Carbohydrate-Restricted Diet on Hepatic Steatosis in Humans.

scientific article

An atlas of human metabolism

scientific article published on 24 March 2020

An atlas of the protein-coding genes in the human, pig, and mouse brain

scientific article published on 01 March 2020

Analysis of the human tissue-specific expression by genome-wide integration of transcriptomics and antibody-based proteomics

scientific article published on 05 December 2013

Artificial backbone neuronal network for nano scale sensors

Characterization of different fat depots in NAFLD using inflammation-associated proteome, lipidome and metabolome

scientific article published in Scientific Reports

Combined Metabolic Activators Accelerates Recovery in Mild-to-Moderate COVID-19

scientific article published on 28 June 2021

Combined metabolic activators therapy ameliorates liver fat in nonalcoholic fatty liver disease patients

scientific article published on 01 October 2021

Current Status of COVID-19 Therapies and Drug Repositioning Applications

scientific article published on 20 June 2020

Defining the human adipose tissue proteome to reveal metabolic alterations in obesity

scientific article published on 25 September 2014

Defining the human gallbladder proteome by transcriptomics and affinity proteomics

scholarly article by Caroline Kampf published in October 2014

Development of artificial neuronal networks for molecular communication

Elevated Plasma Levels of 3-Hydroxyisobutyric Acid Are Associated With Incident Type 2 Diabetes

scientific article

Genome-scale metabolic modelling of hepatocytes reveals serine deficiency in patients with non-alcoholic fatty liver disease

scientific article published in January 2014

Improvement in the Current Therapies for Hepatocellular Carcinoma Using a Systems Medicine Approach

scientific article published on 08 April 2020

Integration of clinical data with a genome-scale metabolic model of the human adipocyte

scientific article

Integration of molecular profiles in a longitudinal wellness profiling cohort

scientific article published on 08 September 2020

MEMOTE for standardized genome-scale metabolic model testing

scientific article published on 01 March 2020

Memote: A community-driven effort towards a standardized genome-scale metabolic model test suite

Metabolic network-based stratification of hepatocellular carcinoma reveals three distinct tumor subtypes

article published in the Proceedings of the National Academy of Sciences of the United States of America

Mitochondria-related transcriptional signature is downregulated in adipocytes in obesity: a study of young healthy MZ twins.

scientific article published on 12 October 2016

Multiomics Analysis Reveals the Impact of Microbiota on Host Metabolism in Hepatic Steatosis

scientific article published on 07 February 2022

New paradigms for metabolic modeling of human cells

scientific article published on 02 January 2015

Personal model-assisted identification of NAD+ and glutathione metabolism as intervention target in NAFLD.

scientific article published on 02 March 2017

Predicting growth of the healthy infant using a genome scale metabolic model

scientific article

Proteome- and Transcriptome-Driven Reconstruction of the Human Myocyte Metabolic Network and Its Use for Identification of Markers for Diabetes

scientific article published on 16 February 2016

Proteome- and transcriptome-driven reconstruction of the human myocyte metabolic network and its use for identification of markers for diabetes

scientific article published on 30 April 2015

Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing

scientific article published on 01 April 2020

Quantifying Diet-Induced Metabolic Changes of the Human Gut Microbiome.

scientific article

Recent Progress and Future Direction for the Application of Multiomics Data in Clinical Liver Transplantation

publication published on 04 January 2022

Reconstruction of genome-scale active metabolic networks for 69 human cell types and 16 cancer types using INIT

scientific article

Selection of complementary foods based on optimal nutritional values

scientific article

Systems Biology Approaches to Decipher the Underlying Molecular Mechanisms of Glioblastoma Multiforme

scientific article published in 2021

Systems biology in hepatology: approaches and applications

scientific article published on 23 April 2018

Systems biology perspective for studying the gut microbiota in human physiology and liver diseases

scientific article published on 18 October 2019

TCSBN: a database of tissue and cancer specific biological networks

scientific article published on 24 October 2017

The acute effect of metabolic cofactor supplementation: a potential therapeutic strategy against non-alc33oholic fatty liver disease

scientific article published on 01 April 2020

The effect of the TM6SF2 E167K variant on liver steatosis and fibrosis in patients with chronic hepatitis C: a meta-analysis.

scientific article

The human cardiac and skeletal muscle proteomes defined by transcriptomics and antibody-based profiling

scientific article published on 25 June 2015

The human liver-specific proteome defined by transcriptomics and antibody-based profiling

scientific article

The human secretome

scientific article published on 26 November 2019

Transcriptomics resources of human tissues and organs

scientific article

Understanding the interactions between bacteria in the human gut through metabolic modeling

scientific article

Vimentin deficiency in macrophages induces increased oxidative stress and vascular inflammation but attenuates atherosclerosis in mice

scientific article published in Scientific Reports

List of works by Adil Mardinoglu

A genome-wide transcriptomic analysis of protein-coding genes in human blood cells

A pathology atlas of the human cancer transcriptome

A subcellular map of the human proteome

Adipose tissue morphology, imaging and metabolomics predicting cardiometabolic risk and family history of type 2 diabetes in non-obese men

An Integrated Understanding of the Rapid Metabolic Benefits of a Carbohydrate-Restricted Diet on Hepatic Steatosis in Humans.

An atlas of human metabolism

An atlas of the protein-coding genes in the human, pig, and mouse brain

Analysis of the human tissue-specific expression by genome-wide integration of transcriptomics and antibody-based proteomics

Artificial backbone neuronal network for nano scale sensors

Characterization of different fat depots in NAFLD using inflammation-associated proteome, lipidome and metabolome

Combined Metabolic Activators Accelerates Recovery in Mild-to-Moderate COVID-19

Combined metabolic activators therapy ameliorates liver fat in nonalcoholic fatty liver disease patients

Current Status of COVID-19 Therapies and Drug Repositioning Applications

Defining the human adipose tissue proteome to reveal metabolic alterations in obesity

Defining the human gallbladder proteome by transcriptomics and affinity proteomics

Development of artificial neuronal networks for molecular communication

Elevated Plasma Levels of 3-Hydroxyisobutyric Acid Are Associated With Incident Type 2 Diabetes

Genome-scale metabolic modelling of hepatocytes reveals serine deficiency in patients with non-alcoholic fatty liver disease

Improvement in the Current Therapies for Hepatocellular Carcinoma Using a Systems Medicine Approach

Integration of clinical data with a genome-scale metabolic model of the human adipocyte

Integration of molecular profiles in a longitudinal wellness profiling cohort

MEMOTE for standardized genome-scale metabolic model testing

Memote: A community-driven effort towards a standardized genome-scale metabolic model test suite

Metabolic network-based stratification of hepatocellular carcinoma reveals three distinct tumor subtypes

Mitochondria-related transcriptional signature is downregulated in adipocytes in obesity: a study of young healthy MZ twins.

Multiomics Analysis Reveals the Impact of Microbiota on Host Metabolism in Hepatic Steatosis

New paradigms for metabolic modeling of human cells

Personal model-assisted identification of NAD+ and glutathione metabolism as intervention target in NAFLD.

Predicting growth of the healthy infant using a genome scale metabolic model

Proteome- and Transcriptome-Driven Reconstruction of the Human Myocyte Metabolic Network and Its Use for Identification of Markers for Diabetes

Proteome- and transcriptome-driven reconstruction of the human myocyte metabolic network and its use for identification of markers for diabetes

Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing

Quantifying Diet-Induced Metabolic Changes of the Human Gut Microbiome.

Recent Progress and Future Direction for the Application of Multiomics Data in Clinical Liver Transplantation

Reconstruction of genome-scale active metabolic networks for 69 human cell types and 16 cancer types using INIT

Selection of complementary foods based on optimal nutritional values

Systems Biology Approaches to Decipher the Underlying Molecular Mechanisms of Glioblastoma Multiforme

Systems biology in hepatology: approaches and applications

Systems biology perspective for studying the gut microbiota in human physiology and liver diseases

TCSBN: a database of tissue and cancer specific biological networks

The acute effect of metabolic cofactor supplementation: a potential therapeutic strategy against non-alc33oholic fatty liver disease

The effect of the TM6SF2 E167K variant on liver steatosis and fibrosis in patients with chronic hepatitis C: a meta-analysis.

The human cardiac and skeletal muscle proteomes defined by transcriptomics and antibody-based profiling

The human liver-specific proteome defined by transcriptomics and antibody-based profiling

The human secretome

Transcriptomics resources of human tissues and organs

Understanding the interactions between bacteria in the human gut through metabolic modeling

Vimentin deficiency in macrophages induces increased oxidative stress and vascular inflammation but attenuates atherosclerosis in mice