Search filters

List of works by Dick van Soolingen

24-locus MIRU-VNTR genotyping is a useful tool to study the molecular epidemiology of tuberculosis among Warao Amerindians in Venezuela

scientific article published on 2 June 2008

A Mycobacterium tuberculosis cluster demonstrating the use of genotyping in urban tuberculosis control

scientific article

A Novel Advanced Laboratory Diagnosis to Guide Tuberculosis Drug Therapy

scientific article published on 3 August 2015

A Predominant Variable-Number Tandem-Repeat Cluster of Mycobacterium tuberculosis Isolates among Asylum Seekers in the Netherlands and Denmark, Deciphered by Whole-Genome Sequencing

scientific article

A Step toward an Optimized Rifampin Dose Completed.

scientific article

A cluster of multidrug-resistant Mycobacterium tuberculosis among patients arriving in Europe from the Horn of Africa: a molecular epidemiological study

scientific article

A dose-ranging trial to optimize the dose of rifampin in the treatment of tuberculosis

scientific article published on May 2015

A lipid profile typifies the Beijing strains of Mycobacterium tuberculosis: identification of a mutation responsible for a modification of the structures of phthiocerol dimycocerosates and phenolic glycolipids

scientific journal article

A multi-country non-inferiority cluster randomized trial of frontloaded smear microscopy for the diagnosis of pulmonary tuberculosis

scientific article published on 12 July 2011

A novel approach - the propensity to propagate (PTP) method for controlling for host factors in studying the transmission of Mycobacterium tuberculosis

scientific article

A novel multi SNP based method for the identification of subspecies and associated lineages and sub-lineages of the Mycobacterium tuberculosis complex by whole genome sequencing

scholarly article published 5 November 2017

A novel multiplex real-time PCR for the identification of mycobacteria associated with zoonotic tuberculosis

scientific article

A sign of superspreading in tuberculosis: highly skewed distribution of genotypic cluster sizes

scientific article published on May 2013

Activity of the efflux pump inhibitor SILA 421 against drug-resistant tuberculosis

scholarly article by Sami O. Simons et al published May 2013 in International Journal of Antimicrobial Agents

African 2, a Clonal Complex of Mycobacterium bovis Epidemiologically Important in East Africa

scientific article published in 2012

African 2, a clonal complex of Mycobacterium bovis epidemiologically important in East Africa

scientific article

Amikacin Pharmacokinetics/Pharmacodynamics in a Novel Hollow-Fiber Mycobacterium abscessus Disease Model

scientific article published on 7 December 2015

Annual Mycobacterium tuberculosis infection risk and interpretation of clustering statistics

scientific article published on February 2003

Antibiotic resistance prediction for Mycobacterium tuberculosis from genome sequence data with Mykrobe

scientific article published on 02 December 2019

Antimycobacterial agents differ with respect to their bacteriostatic versus bactericidal activities in relation to time of exposure, mycobacterial growth phase, and their use in combination

scientific article

Antituberculosis drug resistance in the south of Vietnam: prevalence and trends

scientific article

Application of machine learning techniques to tuberculosis drug resistance analysis

scholarly article by Samaneh Kouchaki et al published 21 November 2018 in Bioinformatics

Application of sensitive and specific molecular methods to uncover global dissemination of the major RDRio Sublineage of the Latin American-Mediterranean Mycobacterium tuberculosis spoligotype family

scientific article published on 30 January 2008

Application of spoligotyping to noncultured Mycobacterium tuberculosis bacteria requires an optimized approach

scientific article published in November 2003

Are phylogenetic position, virulence, drug susceptibility and in vivo response to treatment in mycobacteria interrelated?

scientific article published on 20 October 2011

Assessment of population structure and major circulating phylogeographical clades of Mycobacterium tuberculosis complex in Bangladesh suggests a high prevalence of a specific subclade of ancient M. tuberculosis genotypes

scientific article

Association between genotype and drug resistance profiles of Mycobacterium tuberculosis strains circulating in China in a national drug resistance survey

scientific article

Bead array direct rRNA capture assay (rCapA) for amplification free speciation of Mycobacterium cultures

scientific article (publication date: 2012)

Beijing genotype of Mycobacterium tuberculosis is significantly associated with human immunodeficiency virus infection and multidrug resistance in cases of tuberculous meningitis

scientific article

Cervicofacial lymphadenitis caused by nontuberculous mycobacteria; host, environmental or bacterial factors?

Characterization of Mycobacterium africanum subtype I among cows in a dairy farm in Bangladesh using spoligotyping

scientific article published on 01 July 2007

Characterization of Mycobacterium orygis

scientific article published in March 2013

Characterization of Mycobacterium orygis as M. tuberculosis complex subspecies

scientific article

Characterization of ancestral Mycobacterium tuberculosis by multiple genetic markers and proposal of genotyping strategy

scientific article

Characterization of extensively drug-resistant tuberculosis cases from Valle del Cauca, Colombia

scientific article (publication date: December 2012)

Characterization of the Manila family of Mycobacterium tuberculosis

scientific article

Characterization of the major formamidopyrimidine-DNA glycosylase homolog in Mycobacterium tuberculosis and its linkage to variable tandem repeats

scientific journal article

Chronic leg ulcer caused by Mycobacterium immunogenum

scientific article published on November 2005

Clarithromycin increases linezolid exposure in multidrug-resistant tuberculosis patients

scientific article

Clinical Manifestations, Diagnosis, and Treatment of Mycobacterium haemophilum Infections ⬇️

scientific article published on October 1, 2011

Clinical relevance of Mycobacterium chelonae–abscessus group isolation in 95 patients

scientific article published in 2009

Clinical relevance of Mycobacterium szulgai in The Netherlands

scientific article published in April 2008

Clofazimine Prevents the Regrowth of Mycobacterium abscessus and Mycobacterium avium Type Strains Exposed to Amikacin and Clarithromycin

scientific article published on 7 December 2015

Clustered tuberculosis cases: do they represent recent transmission and can they be detected earlier?

scientific article

Clustering of Beijing genotype Mycobacterium tuberculosis isolates from the Mekong delta in Vietnam on the basis of variable number of tandem repeat versus restriction fragment length polymorphism typing

scientific article published on 2 February 2013

Clustering of tuberculosis cases based on variable-number tandem-repeat typing in relation to the population structure of Mycobacterium tuberculosis in the Netherlands

scientific article published on 08 May 2013

Clusters of multidrug-resistant Mycobacterium tuberculosis cases, Europe

scientific article published on July 2009

Combined species identification, genotyping, and drug resistance detection of Mycobacterium tuberculosis cultures by MLPA on a bead-based array

scientific article

Comparative study of IS6110 restriction fragment length polymorphism and variable-number tandem-repeat typing of Mycobacterium tuberculosis isolates in the Netherlands, based on a 5-year nationwide survey

scientific article published on 30 January 2013

Comparative study on genotypic and phenotypic second-line drug resistance testing of Mycobacterium tuberculosis complex isolates

scientific article

Comparison of 14 molecular assays for detection of Mycobacterium tuberculosis complex in bronchoalveolar lavage fluid.

scientific article published on 21 August 2013

Comparison of PCR with the routine procedure for diagnosis of tuberculosis in a population with high prevalences of tuberculosis and human immunodeficiency virus

scientific article published on March 2004

Comparison of different treatments for isoniazid-resistant tuberculosis: an individual patient data meta-analysis.

scientific article published in April 2018

Comparison of the pharmacokinetics of two dosage regimens of linezolid in multidrug-resistant and extensively drug-resistant tuberculosis patients

scientific article published on August 2010

Complete genome sequence of Mycobacterium phlei type strain RIVM601174.

scientific article

Complete genome sequence of Mycobacterium vaccae type strain ATCC 25954.

scientific article

Complete genome sequence of Mycobacterium xenopi type strain RIVM700367.

scientific article

Consequences of Noncompliance for Therapy Efficacy and Emergence of Resistance in Murine Tuberculosis Caused by the Beijing Genotype of Mycobacterium tuberculosis ⬇️

scientific article published on July 16, 2012

Correction: Epidemiological links between tuberculosis cases identified twice as efficiently by whole genome sequencing than conventional molecular typing: A population-based study.

scientific article published on 14 May 2018

Correction: Variability and cost implications of three generations of the Roche LightCycler® 480.

scientific article published on 9 February 2018

Corrigendum to “Mapping of IS6110 insertion sites in Mycobacterium bovis isolates in relation to adaptation from the animal to human host” [Vet. Microbiol. 129 (2008) 333–341]

scholarly article published in Veterinary Microbiology

Cross border, highly individualised treatment of a patient with challenging extensively drug-resistant tuberculosis

scientific article

Current status and opportunities for therapeutic drug monitoring in the treatment of tuberculosis

scientific article published on 7 March 2016

Current trends of Mycobacterium tuberculosis molecular epidemiology in Saudi Arabia and associated demographical factors

scientific article published on 22 March 2013

DNA fingerprinting of Mycobacterium tuberculosis: from phage typing to whole-genome sequencing.

scientific article published on 3 November 2011

Definition of the Beijing/W lineage of Mycobacterium tuberculosis on the basis of genetic markers

scientific article published on September 2004

Diagnosis and treatment of lung infection with nontuberculous mycobacteria

scientific article published on May 2009

Differences in the population of genetics of Mycobacterium tuberculosis between urban migrants and local residents in Beijing, China

scientific article

Disclosure of selective advantages in the "modern" sublineage of the Mycobacterium tuberculosis Beijing genotype family by quantitative proteomics

scientific article

Discriminatory power and reproducibility of novel DNA typing methods for Mycobacterium tuberculosis complex strains

scientific article

Disease dynamics in cyclic populations of field voles (Microtus agrestis): cowpox virus and vole tuberculosis (Mycobacterium microti)

article

Disseminated Mycobacterium avium subsp. avium infection in a cat, the Netherlands

article by Piet Hein S. de Groot et al published August 2010 in Veterinary Microbiology

Drug Susceptibility Testing for Optimizing Tuberculosis Treatment ⬇️

scientific article published on January 1, 2011

Drug Susceptibility ofMycobacterium tuberculosisBeijing Genotype and Association with MDR TB ⬇️

scientific article published on April 1, 2012

Drug susceptibility testing of Mycobacterium tuberculosis complex by use of a high-throughput, reproducible, absolute concentration method

scientific article

Drug treatment of pulmonary nontuberculous mycobacterial disease in HIV-negative patients: the evidence

scientific article published on October 2013

ESAT-6 and CFP-10 in clinical versus environmental isolates of Mycobacterium kansasii

scientific article published on 15 March 2005

ESX-1-mediated translocation to the cytosol controls virulence of mycobacteria

scientific article

Ecotypes of the Mycobacterium tuberculosis complex

scientific article published on 20 October 2005

Editorial commentary: genotyping of Mycobacterium tuberculosis in China and missing links in the chain of ongoing transmission of tuberculosis

scientific article published on 31 March 2015

Enhancement of in vitro activity of tuberculosis drugs by addition of thioridazine is not reflected by improved in vivo therapeutic efficacy

scientific article published on 13 October 2014

Epidemiological links between tuberculosis cases identified twice as efficiently by whole genome sequencing than conventional molecular typing: A population-based study

scientific article published on 4 April 2018

Epidemiology of Mycobacterium bovis disease in humans, The Netherlands, 1993-2007

scientific article

Epidemiology of antituberculosis drug resistance 2002-07: an updated analysis of the Global Project on Anti-Tuberculosis Drug Resistance Surveillance

scientific article published on 15 April 2009

Epidemiology of isoniazid resistance mutations and their effect on tuberculosis treatment outcomes

scientific article published on 20 May 2013

European 1: a globally important clonal complex of Mycobacterium bovis

scientific article published on 6 May 2011

European 2 – A clonal complex of Mycobacterium bovis dominant in the Iberian Peninsula

scientific article published on 14 September 2011

Evaluation of co-trimoxazole in the treatment of multidrug-resistant tuberculosis

scientific article

Evaluation of macrolides for possible use against multidrug-resistant Mycobacterium tuberculosis

scientific article published on 28 May 2015

Evidence for the Effect of Vaccination on Host-Pathogen Interactions in a Murine Model of Pulmonary Tuberculosis by Mycobacterium tuberculosis

scientific article published on 19 May 2020

Exposure of dentists to Mycobacterium tuberculosis, Ibadan, Nigeria

scientific article published on September 2010

Extensive genomic polymorphism within Mycobacterium avium

scientific article published on September 2004

Failure of the Amikacin, Cefoxitin, and Clarithromycin Combination Regimen for Treating Pulmonary Mycobacterium abscessus Infection

scientific article published on 25 July 2016

False-positive mycobacterium tuberculosis cultures in 44 laboratories in The Netherlands (1993 to 2000): incidence, risk factors, and consequences

scientific article

Fast ligation-mediated PCR, a fast and reliable method for IS6110-based typing of Mycobacterium tuberculosis complex

scientific article

Fatal Mycobacterium bovis bacille Calmette-Guérin infection caused by contamination of chemotherapeutic agents and not by endogenous reactivation: correction of a previous conclusion

scientific article published in September 2003

First worldwide proficiency study on variable-number tandem-repeat typing of Mycobacterium tuberculosis complex strains

scientific article published on 14 December 2011

Fluorescence microscopy for tuberculosis diagnosis

scientific article published in April 2007

GWAS for quantitative resistance phenotypes in Mycobacterium tuberculosis reveals resistance genes and regulatory regions

article

Genetic Determinants of Drug Resistance in Mycobacterium tuberculosis and Their Diagnostic Value

scientific article published on 24 February 2016

Genetic profiling of Mycobacterium tuberculosis revealed "modern" Beijing strains linked to MDR-TB from Southwestern Colombia

scientific article published on 24 April 2020

Genome structure in the vole bacillus, Mycobacterium microti, a member of the Mycobacterium tuberculosis complex with a low virulence for humans

scientific article

Genomic characterization of Mycobacterium tuberculosis lineage 7 and a proposed name: 'Aethiops vetus'.

scientific article published on 24 June 2016

Genomic deletions classify the Beijing/W strains as a distinct genetic lineage of Mycobacterium tuberculosis

scientific article

Genomic polymorphisms for Mycobacterium avium subsp. paratuberculosis diagnostics

scientific article

Genomics and Machine Learning for Taxonomy Consensus: The Mycobacterium tuberculosis Complex Paradigm

scientific article published on 8 July 2015

Global distribution of Mycobacterium tuberculosis spoligotypes

scientific article

High-resolution typing by integration of genome sequencing data in a large tuberculosis cluster

scientific article

Human immunodeficiency virus and tuberculosis coinfection in children: challenges in diagnosis and treatment

scientific article published on October 2010

Hypersensitivity pneumonitis caused by Mycobacterium avium subsp. hominissuis in a hot tub, as proven by IS1245 RFLP and rep-PCR typing

scientific article published in 2012

Identification of a novel conjugative plasmid in mycobacteria that requires both type IV and type VII secretion

scientific article

Impact of COVID-19 pandemic on tuberculosis laboratory services in Europe

scientific article published on 12 November 2020

Impact of New American Thoracic Society Diagnostic Criteria on Management of Nontuberculous Mycobacterial Infection

Implementation of 25-well culture plates for M. tuberculosis drug susceptibility testing in Indonesia

article

In vitro activity of thioridazine against mycobacteria

In vitro drug susceptibility of 2275 clinical non-tuberculous Mycobacterium isolates of 49 species in The Netherlands

scientific article published on 16 December 2009

In vitro synergy between linezolid and clarithromycin against Mycobacterium tuberculosis

scientific article published on 02 May 2014

Increased transmission of Mycobacterium tuberculosis Beijing genotype strains associated with resistance to streptomycin: a population-based study

scientific article

Increased vaccine efficacy against tuberculosis of recombinant Mycobacterium bovis bacille Calmette-Guérin mutants that secrete listeriolysin

scientific article

Individualizing management of extensively drug-resistant tuberculosis: diagnostics, treatment, and biomarkers

scientific article

Infection of great apes and a zoo keeper with the same Mycobacterium tuberculosis spoligotype

scientific article

Inferring patient to patient transmission of Mycobacterium tuberculosis from whole genome sequencing data

scientific article

Influence of Sampling on Clustering and Associations With Risk Factors in the Molecular Epidemiology of Tuberculosis ⬇️

scientific article published on May 23, 2011

Innate immune response to Mycobacterium tuberculosis Beijing and other genotypes

scientific article

Intermediate Susceptibility Dose-Dependent Breakpoints For High Dose Rifampicin, Isoniazid and Pyrazinamide Treatment in multidrug-resistant tuberculosis Programmes

scientific article

Invasive disease caused by nontuberculous mycobacteria, Tanzania

scientific article published on January 2009

Inventory study of non-tuberculous mycobacteria in the European Union

scientific article

Investigation on Mycobacterium tuberculosis diversity in China and the origin of the Beijing clade

scientific article

Isolation of mycobacteria other than Mycobacterium avium from porcine lymph nodes

scientific article published on 11 January 2010

Isolation of nontuberculous mycobacteria in Zambia: eight case reports

scientific article

Isolation of the genome sequence strain Mycobacterium avium 104 from multiple patients over a 17-year period

scientific article

Isoniazid (INH) mono-resistance and tuberculosis (TB) treatment success: analysis of European surveillance data, 2002 to 2014.

scientific article published in March 2019

Low induction of proinflammatory cytokines parallels evolutionary success of modern strains within the Mycobacterium tuberculosis Beijing genotype

scientific article

Low rate of fluoroquinolone resistance in Mycobacterium tuberculosis isolates from northern Tanzania

scientific article

M. tuberculosis genotypic diversity and drug susceptibility pattern in HIV-infected and non-HIV-infected patients in northern Tanzania

scientific article

Mapping of IS6110 insertion sites in Mycobacterium bovis isolates in relation to adaptation from the animal to human host.

scientific article

Measuring tuberculosis transmission in low-incidence countries

scientific article published in February 2018

Mechanisms of Phenotypic Rifampicin Tolerance in Mycobacterium tuberculosis Beijing Genotype Strain B0/W148 Revealed by Proteomics.

scientific article

Membrane Filtration Is Suitable for Reliable Elimination of Mycobacterium tuberculosis from Saliva for Therapeutic Drug Monitoring

scientific article published on 9 August 2017

Microarray analysis of Mycobacterium microti reveals deletion of genes encoding PE-PPE proteins and ESAT-6 family antigens

scientific article published on January 2004

Microevolution of Mycobacterium tuberculosis in a tuberculosis patient

scientific article

Mixed Tuberculosis Infections in Rural South Vietnam ⬇️

scientific article published on February 29, 2012

Molecular Typing of Nontuberculous Mycobacteria

article published in 2012

Molecular characteristics of "Mycobacterium canettii" the smooth Mycobacterium tuberculosis bacilli

scientific article

Molecular evidence to support a proposal to reserve the designation Mycobacterium avium subsp. avium for bird-type isolates and 'M. avium subsp. hominissuis' for the human/porcine type of M. avium

scientific article (publication date: September 2002)

Molecular typing of Mycobacterium tuberculosis by mycobacterial interspersed repetitive unit-variable-number tandem repeat analysis, a more accurate method for identifying epidemiological links between patients with tuberculosis

scientific article

Moxifloxacin's Limited Efficacy in the Hollow-Fiber Model of Mycobacterium abscessus Disease

scientific article published on 11 April 2016

Multicenter evaluation of reverse line blot assay for detection of drug resistance in Mycobacterium tuberculosis clinical isolates

scientific article

Multidrug-resistant Mycobacterium tuberculosis, Southwestern Colombia

scientific article

Multidrug-resistant and extensively drug-resistant tuberculosis: a threat to global control of tuberculosis

scientific article published on May 2010

Multidrug-resistant tuberculosis, People's Republic of China, 2007-2009

scientific article published in October 2011

Multiple Mycobacterium tuberculosis infections in an HIV-infected patient.

scientific article published in July 2007

Mutations in putative mutator genes of Mycobacterium tuberculosis strains of the W-Beijing family

scientific article

Mutations in the regulatory network underlie the recent clonal expansion of a dominant subclone of the Mycobacterium tuberculosis Beijing genotype

scientific article published on 28 January 2011

Mycobacterial disease in patients with rheumatic disease

scientific article published on December 2008

Mycobacterium avium in a shower linked to pulmonary disease

scientific article

Mycobacterium bovis and M. tuberculosis in goats, Nigeria

scientific article published on December 2009

Mycobacterium bovis infection in a young Dutch adult: transmission from an elderly human source?

scientific article published on 17 March 2012

Mycobacterium bovis, but also M. africanum present in raw milk of pastoral cattle in north-central Nigeria

scientific article published on 4 March 2010

Mycobacterium mantenii sp. nov., a pathogenic, slowly growing, scotochromogenic species

scientific article

Mycobacterium noviomagense sp. nov.; clinical relevance evaluated in 17 patients

scientific article

Mycobacterium riyadhense overlooked: we can only find what we are looking for

scientific article published in 2013

Mycobacterium riyadhense sp. nov., a non-tuberculous species identified as Mycobacterium tuberculosis complex by a commercial line-probe assay

scientific article

Mycobacterium sherrisii sp. nov., a slow-growing non-chromogenic species

scientific article

Mycobacterium tuberculosis Beijing genotype and risk for treatment failure and relapse, Vietnam

scientific article

Mycobacterium tuberculosis Beijing genotype is an independent risk factor for tuberculosis treatment failure in Indonesia

scientific article

Mycobacterium tuberculosis Beijing genotype resistance to transient rifampin exposure

scientific article published on November 2014

Mycobacterium tuberculosis Beijing genotype, the Netherlands

scientific article

Mycobacterium tuberculosis Beijing type mutation frequency--author's response

scientific article published in March 2013

Mycobacterium tuberculosis and Dual M. tuberculosis/M. bovis Infection as the Cause of Tuberculosis in a Gorilla and a Lioness, Respectively, in Ibadan Zoo, Nigeria.

scientific article published on 15 May 2016

Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology

scientific article (publication date: 6 March 2006)

Mycobacterium tuberculosis genotype and case notification rates, rural Vietnam, 2003-2006

scientific article

Mycobacterium tuberculosis lineage 1 genetic diversity in Pará, Brazil, suggests common ancestry with east-African isolates potentially linked to historical slave trade

scientific article published on 03 June 2019

Mycobacterium tuberculosis population structures differ significantly on two Indonesian Islands

scientific article

Mycobacterium tuberculosis strains of the Beijing genotype are rarely observed in tuberculosis patients in South America

scientific article published on 01 August 2008

Mycobacterium tuberculosis, Beijing genotype strains not associated with radiological presentation of pulmonary tuberculosis.

scientific article

Mycobacterium xenopi clinical relevance and determinants, the Netherlands

scientific article published on March 2008

No human transmission ofMycobacterium malmoensein a perfect storm setting

article

Nontuberculous Mycobacteria Isolated from Tuberculosis Suspects in Ibadan, Nigeria

scientific article published on 23 March 2016

Nontuberculous mycobacteria in respiratory tract infections, eastern Asia

scientific article

Nontuberculous mycobacteria infection and tumor necrosis factor-alpha antagonists

scientific article published on October 2009

Nontuberculous mycobacteria: clinically relevant

scientific article published in January 2010

NosocomialMycobacteriumbovis–Bacille Calmette‐Guérin Infections Due to Contamination of Chemotherapeutics: Case Finding and Route of Transmission ⬇️

scientific article published on October 15, 2003

Novel genetic polymorphisms that further delineate the phylogeny of the Mycobacterium tuberculosis complex

scientific article

Novel multiplex real-time PCR diagnostic assay for identification and differentiation of Mycobacterium tuberculosis, Mycobacterium canettii, and Mycobacterium tuberculosis complex strains

scientific article

Occurrence and Nature of Double Alleles in Variable-Number Tandem-Repeat Patterns of More than 8,000 Mycobacterium tuberculosis Complex Isolates in The Netherlands

scientific article published on 15 November 2017

On the road to unravelling the aetiology of non-tuberculous mycobacterial disease [Editorial]

Optimization of standard in-house 24-locus variable-number tandem-repeat typing for Mycobacterium tuberculosis and its direct application to clinical material

scientific article published on 05 February 2014

Optimization of the rifampin dosage to improve the therapeutic efficacy in tuberculosis treatment using a murine model

scientific article published on May 2013

Optimizing multiplex SNP-based data analysis for genotyping of Mycobacterium tuberculosis isolates

scientific article

Origin, spread and demography of the Mycobacterium tuberculosis complex

scientific article published in 2008

Otomastoiditis caused by Mycobacterium abscessus, The Netherlands

scientific article published on January 2010

PCR-based method to differentiate the subspecies of the Mycobacterium tuberculosis complex on the basis of genomic deletions

scientific article

Parallel reaction monitoring of clinical Mycobacterium tuberculosis lineages reveals pre-existent markers of rifampicin tolerance in the emerging Beijing lineage

scientific article

Performance of Xpert MTB/RIF Ultra: a matter of dead or alive

scientific article published on 30 November 2017

Pharmacokinetic/pharmacodynamic-based optimization of levofloxacin administration in the treatment of MDR-TB.

scientific article published on 26 May 2016

Pharmacokinetics of Levofloxacin in Multidrug- and Extensively Drug-Resistant Tuberculosis Patients

scientific article published on 15 May 2017

Pharmacokinetics of ertapenem in patients with multidrug-resistant tuberculosis

scientific article published on 7 January 2016

Population structure of mixed Mycobacterium tuberculosis infection is strain genotype and culture medium dependent

scientific article

Positive IS900 in situ hybridization signals as evidence for role of Mycobacterium avium subsp. paratuberculosis in etiology of Crohn's disease

scientific article published on August 2002

Possible underlying mechanisms for successful emergence of the Mycobacterium tuberculosis Beijing genotype strains

scientific article

Pound foolish and penny wise-when will dosing of rifampicin be optimised?

scientific article published on 29 January 2018

Pre-existing isoniazid resistance, but not the genotype of Mycobacterium tuberculosis drives rifampicin resistance codon preference in vitro

scientific article

Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing

scientific article published on 26 September 2018

Predictive value of molecular drug resistance testing of Mycobacterium tuberculosis isolates in Valle del Cauca, Colombia

scientific article published on 08 May 2013

Predominance of modern Mycobacterium tuberculosis strains and active transmission of Beijing sublineage in Jayapura, Indonesia Papua

scientific article published on 26 January 2016

Preferential deletion events in the direct repeat locus of Mycobacterium tuberculosis

scientific article

Prevalence and Characterization of Heterogeneous Variable-Number Tandem-Repeat Clusters Comprising Drug-Susceptible and/or Variable Resistant Mycobacterium tuberculosis Complex Isolates in the Netherlands from 2004 to 2016

scientific article published on 25 October 2018

Prevalence of nontuberculous mycobacteria in COPD patients with exacerbations

scholarly article by Wouter Hoefsloot et al published June 2013 in Journal of Infection

Proposal for standardization of optimized mycobacterial interspersed repetitive unit-variable-number tandem repeat typing of Mycobacterium tuberculosis

scientific article

Protection of macaques against Mycobacterium tuberculosis infection by a subunit vaccine based on a fusion protein of antigen 85B and ESAT-6

scientific article published on 01 April 2005

Proteogenomic analysis of polymorphisms and gene annotation divergences in prokaryotes using a clustered mass spectrometry-friendly database

scientific article

Pulmonary Mycobacterium szulgai infection and treatment in a patient receiving anti-tumor necrosis factor therapy.

scientific article published in July 2007

Pyrazinamide resistance-conferring mutations in pncA and the transmission of multidrug resistant TB in Georgia

scientific article

Rapidly growing nontuberculous mycobacteria cultured from home tap and shower water

scientific article

Region of difference 1 in nontuberculous Mycobacterium species adds a phylogenetic and taxonomical character

scientific article published on 17 July 2009

Resistance mechanisms and drug susceptibility testing of nontuberculous mycobacteria

scientific article published on 21 April 2012

Resolving lineage assignation on Mycobacterium tuberculosis clinical isolates classified by spoligotyping with a new high-throughput 3R SNPs based method

scientific article published on 17 July 2010

Retraction Note: Infection of great apes and a zoo keeper with the same Mycobacterium tuberculosis spoligotype

scientific article published on 09 July 2020

Role of rpsA gene sequencing in diagnosis of pyrazinamide resistance

scientific article published on January 2013

SILA-421 activity in vitro against rifampicin-susceptible and rifampicin-resistant Mycobacterium tuberculosis, and in vivo in a murine tuberculosis model

scientific article

SNP-IT Tool for Identifying Subspecies and Associated Lineages of Mycobacterium tuberculosis Complex

scholarly article by Samuel Lipworth et al published March 2019 in Emerging Infectious Diseases

SNP/RD typing of Mycobacterium tuberculosis Beijing strains reveals local and worldwide disseminated clonal complexes

scientific article

Safety and tolerability of clarithromycin in the treatment of multidrug-resistant tuberculosis

scientific article published on 22 March 2017

SeekTB, a two-stage multiplex real-time-PCR-based method for differentiation of the Mycobacterium tuberculosis complex

scientific article

Serodiagnosis of Mycobacterium avium infections in pigs

scientific article

Shorter treatment for multidrug-resistant tuberculosis: the good, the bad and the ugly.

scientific article

Snapshot of moving and expanding clones of Mycobacterium tuberculosis and their global distribution assessed by spoligotyping in an international study

scientific article

Spoligotype profile of Mycobacterium tuberculosis complex strains from HIV-positive and -negative patients in Nigeria: a comparative analysis

scientific article

Spoligotyping and Mycobacterium tuberculosis

scientific article published in August 2005

Sterilizing Effect of Ertapenem-Clavulanate in a Hollow-Fiber Model of Tuberculosis and Implications on Clinical Dosing

scientific article published on 10 July 2017

Synergistic activity of rifampicin and ethambutol against slow-growing nontuberculous mycobacteria is currently of questionable clinical significance

scholarly article by Jakko van Ingen et al published July 2013 in International Journal of Antimicrobial Agents

TB diagnosis in non-human primates: comparison of two interferon-gamma assays and the skin test for identification of Mycobacterium tuberculosis infection

scientific article published in July 2004

Targeted hybridization of IS6110 fingerprints identifies the W-Beijing Mycobacterium tuberculosis strains among clinical isolates

scientific article

The antipsychotic thioridazine shows promising therapeutic activity in a mouse model of multidrug-resistant tuberculosis

scientific article

The epidemic of multidrug resistant tuberculosis in China in historical and phylogenetic perspectives

scientific article published on 20 January 2020

The geographic diversity of nontuberculous mycobacteria isolated from pulmonary samples: an NTM-NET collaborative study

scientific article published on 18 April 2013

The incubation period distribution of tuberculosis estimated with a molecular epidemiological approach ⬇️

scientific article published on March 26, 2011

The influence of host and bacterial genotype on the development of disseminated disease with Mycobacterium tuberculosis

scientific article

The tempo and mode of molecular evolution of Mycobacterium tuberculosis at patient-to-patient scale

scientific article published on 14 October 2009

The use of microbead-based spoligotyping for Mycobacterium tuberculosis complex to evaluate the quality of the conventional method: providing guidelines for Quality Assurance when working on membranes

scientific article

Thioridazine Alters the Cell-Envelope Permeability of Mycobacterium tuberculosis

scientific article published on 11 April 2016

Thioridazine cures extensively drug-resistant tuberculosis (XDR-TB) and the need for global trials is now!

scientific article

Tigecycline Is Highly Efficacious against Mycobacterium abscessus Pulmonary Disease

scientific article published on 29 February 2016

Time-kill kinetics of anti-tuberculosis drugs, and emergence of resistance, in relation to metabolic activity of Mycobacterium tuberculosis ⬇️

scientific article published on October 14, 2010

Time-kill kinetics of antibiotics active against rapidly growing mycobacteria

scientific article published on 25 October 2014

Time-kill kinetics of slowly growing mycobacteria common in pulmonary disease

scientific article

To Be or Not to Be a Pseudogene: A Molecular Epidemiological Approach to the mclx Genes and Its Impact in Tuberculosis

scientific article published on 2 June 2015

Towards standardisation: comparison of five whole genome sequencing (WGS) analysis pipelines for detection of epidemiologically linked tuberculosis cases

scientific article published on 01 December 2019

Transmissible Mycobacterium tuberculosis Strains Share Genetic Markers and Immune Phenotypes.

scientific article published on 20 December 2016

Transmission and Progression to Disease of Mycobacterium tuberculosis Phylogenetic Lineages in The Netherlands

scientific article

Transmission of tuberculosis within family-households

scientific article published on 01 February 2012

Treatment of isoniazid-resistant tuberculosis with first-line drugs: a systematic review and meta-analysis

scientific article published on 16 November 2016

Tuberculosis Acquired Outside of Households, Rural Vietnam ⬇️

scientific article published on September 1, 2010

Tuberculosis drug resistance and HIV infection, the Netherlands

scientific article published on May 2007

Tuberculosis elimination in the Netherlands

scientific article published in April 2005

Tuberculosis outbreaks predicted by characteristics of first patients in a DNA fingerprint cluster

scientific article

Tuberculosis transmission by patients with smear-negative pulmonary tuberculosis in a large cohort in the Netherlands

scientific article published on 01 November 2008

Tuberculosis treatment outcomes in Ethiopia from 2003 to 2016, and impact of HIV co-infection and prior drug exposure: A systematic review and meta-analysis.

scientific article

Two cases of Mycobacterium microti-induced culture-negative tuberculosis

scientific article published on July 2009

Two mycobacterium fortuitum strains isolated from pulmonary tuberculosis patients in Delhi harbour IS6110 homologue

scientific article published on 01 February 2004

Use of RODAC plates to measure containment of Mycobacterium tuberculosis in a Class IIB biosafety cabinet during routine operations

scientific article published on 17 February 2016

Use of a Whole Genome Sequencing-based approach for Mycobacterium tuberculosis surveillance in Europe in 2017-2019: an ECDC pilot study

scientific article published on 30 July 2020

Use of light-emitting diode fluorescence microscopy to detect acid-fast bacilli in sputum

scientific article published in July 2008

Use of multilocus variable-number tandem-repeat analysis for typing Mycobacterium avium subsp. paratuberculosis

scientific article

Use of variable-number tandem-repeat typing to differentiate Mycobacterium tuberculosis Beijing family isolates from Hong Kong and comparison with IS6110 restriction fragment length polymorphism typing and spoligotyping

scientific article

Utility of mycobacterial interspersed repetitive unit typing for differentiating multidrug-resistant Mycobacterium tuberculosis isolates of the Beijing family

scientific article

Utility of rpoB gene sequencing for identification of nontuberculous mycobacteria in the Netherlands

scientific article

Validation of biomarkers for distinguishing Mycobacterium tuberculosis from non-tuberculous mycobacteria using gas chromatography-mass spectrometry and chemometrics

scientific article (publication date: 2013)

Validation of pncA gene sequencing in combination with the mycobacterial growth indicator tube method to test susceptibility of Mycobacterium tuberculosis to pyrazinamide

scientific article published on 16 November 2011

Validation of the GenoType MTBDRplus assay for diagnosis of multidrug resistant tuberculosis in South Vietnam

scientific article

Variability and cost implications of three generations of the Roche LightCycler® 480.

scientific article published on 12 January 2018

WGS more accurately predicts susceptibility of Mycobacterium tuberculosis to first-line drugs than phenotypic testing

scientific article published on 01 September 2019

Whole genome sequence of Mycobacterium kansasii isolates of the genotype 1 from Brazilian patients with pulmonary disease demonstrates considerable heterogeneity.

scientific article

Whole genome sequencing as the ultimate tool to diagnose tuberculosis

scientific article published on 24 November 2016

Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues

scientific article published on 01 September 2019

Worldwide occurrence of Beijing/W strains of Mycobacterium tuberculosis: a systematic review

scientific article

XDR tuberculosis

scientific article published on 01 August 2011

[Findings and ongoing research in the molecular epidemiology of tuberculosis].

scientific article

Paulina is supported by:

About Paulina

Help