List of works - Christian Bendixen

Analyses of pig genomes provide insight into porcine demography and evolution

scientific article

Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology

scientific article

Ancient human genome sequence of an extinct Palaeo-Eskimo

scientific article

The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing

scientific article

Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing

scientific article

Ancient DNA reveals lack of continuity between neolithic hunter-gatherers and contemporary Scandinavians

scientific article

Paleo-Eskimo mtDNA genome reveals matrilineal discontinuity in Greenland

scientific article published on 29 May 2008

Copy number variation in the bovine genome

scientific article

A snapshot of CNVs in the pig genome

scientific article

Gene-associated markers provide tools for tackling illegal fishing and false eco-certification

scientific article published on 22 May 2012

A missense mutation in the bovine SLC35A3 gene, encoding a UDP-N-acetylglucosamine transporter, causes complex vertebral malformation

scientific article

Advances in porcine genomics and proteomics--a toolbox for developing the pig as a model organism for molecular biomedical research

scientific article published on May 2010

Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags

scientific article

A synteny-based draft genome sequence of the forage grass Lolium perenne

scientific article published on 26 September 2015

Global assessment of genomic variation in cattle by genome resequencing and high-throughput genotyping

scientific article

Effectiveness of microsatellite and SNP markers for parentage and identity analysis in species with low genetic diversity: the case of European bison

scientific article

Genome-wide association mapping for female fertility traits in Danish and Swedish Holstein cattle

scientific article published in December 2010

Nuclear receptor corepressor-dependent repression of peroxisome-proliferator-activated receptor delta-mediated transactivation

scientific article published on April 2002

Comparative analysis of protein coding sequences from human, mouse and the domesticated pig

scientific article

CL-46, a novel collectin highly expressed in bovine thymus and liver

scientific article published in November 2002

Enumeration of bifidobacteria in gastrointestinal samples from piglets

scientific article

Genome wide allele frequency fingerprints (GWAFFs) of populations via genotyping by sequencing

scientific article

Gene expression profiles in testis of pigs with extreme high and low levels of androstenone

scientific article (2007)

Transcriptomic and proteomic profiling of two porcine tissues using high-throughput technologies

scientific article

Detection of quantitative trait loci in Danish Holstein cattle affecting clinical mastitis, somatic cell score, udder conformation traits, and assessment of associated effects on milk yield

scientific article published in October 2008

Genome-wide association scan and phased haplotype construction for quantitative trait loci affecting boar taint in three pig breeds

scientific article published on January 13, 2012

Molecular characterisation of the early response in pigs to experimental infection with Actinobacillus pleuropneumoniae using cDNA microarrays

scientific article published on 27 April 2007

Spatio-temporal regulation of ADAR editing during development in porcine neural tissues

scientific article published on August 1, 2012

Microarray expression profiles of 20.000 genes across 23 healthy porcine tissues

scientific article

Refined candidate region specified by haplotype sharing for Escherichia coli F4ab/F4ac susceptibility alleles in pigs

scientific article published on 2 October 2009

Association between SNPs within candidate genes and compounds related to boar taint and reproduction

scientific article published on 5 July 2009

Orthology Guided Assembly in highly heterozygous crops: creating a reference transcriptome to uncover genetic diversity in Lolium perenne

scientific article published on 21 February 2013

SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation

scientific article

Gene expression profiles in liver of pigs with extreme high and low levels of androstenone

scientific article

Purifying selection and molecular adaptation in the genome of Verminephrobacter, the heritable symbiotic bacteria of earthworms

scientific article published on 14 February 2012

A robust linkage map of the porcine autosomes based on gene-associated SNPs

scientific article

Porcine Parkin: molecular cloning of PARK2 cDNA, expression analysis, and identification of a splicing variant

scientific article published on 10 July 2006

Abnormal growth plate function in pigs carrying a dominant mutation in type X collagen

scientific article

Threonine 53 in alpha-synuclein is conserved in long-living non-primate animals

scientific article published on 18 July 2009

Regenerative response in the pig liver remnant varies with the degree of resection and rise in portal pressure

scientific article

Characterisation of five candidate genes within the ETEC F4ab/ac candidate region in pigs

scientific article published on 30 June 2011

Molecular characterization and temporal expression profiling of presenilins in the developing porcine brain

scientific article published on 13 September 2007

Congenital bovine spinal dysmyelination is caused by a missense mutation in the SPAST gene

scientific article

The genetic regulation of the terminating phase of liver regeneration

scientific article published on November 20, 2012

Infertile Finnish Yorkshire boars carry a full-length LINE-1 retrotransposon within the KPL2 gene

scientific article

Characterization of the porcine TOR1A gene: The first step towards generation of a pig model for dystonia

scientific article

Genomic position mapping discrepancies of commercial SNP chips

scientific article

Pairwise comparisons of ten porcine tissues identify differential transcriptional regulation at the gene, isoform, promoter and transcription start site level

scientific article published on July 27, 2013

Porcine gamma-synuclein: molecular cloning, expression analysis, chromosomal localization and functional expression

scientific article

Genomic and molecular characterization of CL-43 and its proximal promoter

scientific article

List of works by Christian Bendixen

Analyses of pig genomes provide insight into porcine demography and evolution

Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology

Ancient human genome sequence of an extinct Palaeo-Eskimo

The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing

Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing

Ancient DNA reveals lack of continuity between neolithic hunter-gatherers and contemporary Scandinavians

Paleo-Eskimo mtDNA genome reveals matrilineal discontinuity in Greenland

Copy number variation in the bovine genome

A snapshot of CNVs in the pig genome

Gene-associated markers provide tools for tackling illegal fishing and false eco-certification

A missense mutation in the bovine SLC35A3 gene, encoding a UDP-N-acetylglucosamine transporter, causes complex vertebral malformation

Advances in porcine genomics and proteomics--a toolbox for developing the pig as a model organism for molecular biomedical research

Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags

A synteny-based draft genome sequence of the forage grass Lolium perenne

Global assessment of genomic variation in cattle by genome resequencing and high-throughput genotyping

Effectiveness of microsatellite and SNP markers for parentage and identity analysis in species with low genetic diversity: the case of European bison

Genome-wide association mapping for female fertility traits in Danish and Swedish Holstein cattle

Nuclear receptor corepressor-dependent repression of peroxisome-proliferator-activated receptor delta-mediated transactivation

Comparative analysis of protein coding sequences from human, mouse and the domesticated pig

CL-46, a novel collectin highly expressed in bovine thymus and liver

Enumeration of bifidobacteria in gastrointestinal samples from piglets

Genome wide allele frequency fingerprints (GWAFFs) of populations via genotyping by sequencing

Gene expression profiles in testis of pigs with extreme high and low levels of androstenone

Transcriptomic and proteomic profiling of two porcine tissues using high-throughput technologies

Detection of quantitative trait loci in Danish Holstein cattle affecting clinical mastitis, somatic cell score, udder conformation traits, and assessment of associated effects on milk yield

Genome-wide association scan and phased haplotype construction for quantitative trait loci affecting boar taint in three pig breeds

Molecular characterisation of the early response in pigs to experimental infection with Actinobacillus pleuropneumoniae using cDNA microarrays

Spatio-temporal regulation of ADAR editing during development in porcine neural tissues

Microarray expression profiles of 20.000 genes across 23 healthy porcine tissues

Refined candidate region specified by haplotype sharing for Escherichia coli F4ab/F4ac susceptibility alleles in pigs

Association between SNPs within candidate genes and compounds related to boar taint and reproduction

Orthology Guided Assembly in highly heterozygous crops: creating a reference transcriptome to uncover genetic diversity in Lolium perenne

SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation

Gene expression profiles in liver of pigs with extreme high and low levels of androstenone

Purifying selection and molecular adaptation in the genome of Verminephrobacter, the heritable symbiotic bacteria of earthworms

A robust linkage map of the porcine autosomes based on gene-associated SNPs

Porcine Parkin: molecular cloning of PARK2 cDNA, expression analysis, and identification of a splicing variant

Abnormal growth plate function in pigs carrying a dominant mutation in type X collagen

Threonine 53 in alpha-synuclein is conserved in long-living non-primate animals

Regenerative response in the pig liver remnant varies with the degree of resection and rise in portal pressure

Characterisation of five candidate genes within the ETEC F4ab/ac candidate region in pigs

Molecular characterization and temporal expression profiling of presenilins in the developing porcine brain

Congenital bovine spinal dysmyelination is caused by a missense mutation in the SPAST gene

The genetic regulation of the terminating phase of liver regeneration

Infertile Finnish Yorkshire boars carry a full-length LINE-1 retrotransposon within the KPL2 gene

Characterization of the porcine TOR1A gene: The first step towards generation of a pig model for dystonia

Genomic position mapping discrepancies of commercial SNP chips

Pairwise comparisons of ten porcine tissues identify differential transcriptional regulation at the gene, isoform, promoter and transcription start site level

Porcine gamma-synuclein: molecular cloning, expression analysis, chromosomal localization and functional expression

Genomic and molecular characterization of CL-43 and its proximal promoter