List of works by Alessandro Tanca

2-D PAGE and MS analysis of proteins from formalin-fixed, paraffin-embedded tissues

scientific article published in September 2009

A Metagenomic Taxonomy-guided Database Search Strategy for Improving Metaproteomic Analysis.

scientific article published on 13 February 2018

A first immunohistochemistry study of transketolase and transketolase-like 1 expression in canine hyperplastic and neoplastic mammary lesions.

scientific article

A human gut metaproteomic dataset from stool samples pretreated or not by differential centrifugation.

scientific article published on 26 July 2015

A straightforward and efficient analytical pipeline for metaproteome characterization

scientific article published on 10 December 2014

Application of 2-D DIGE to formalin-fixed, paraffin-embedded tissues.

scientific article published on 31 January 2011

Atypical carcinoid and large cell neuroendocrine carcinoma of the lung: a proteomic dataset from formalin-fixed archival samples

scientific article published on 09 March 2016

Caloric restriction promotes functional changes involving short-chain fatty acid biosynthesis in the rat gut microbiota

scientific article published in Scientific Reports

Caloric restriction promotes rapid expansion and long-lasting increase of Lactobacillus in the rat fecal microbiota.

scientific article

Clostridial Butyrate Biosynthesis Enzymes Are Significantly Depleted in the Gut Microbiota of Nonobese Diabetic Mice

article

Comparability of differential proteomics data generated from paired archival fresh-frozen and formalin-fixed samples by GeLC-MS/MS and spectral counting

scientific article

Comparative Evaluation of MaxQuant and Proteome Discoverer MS1-Based Protein Quantification Tools

scientific article published on 26 May 2021

Comparison of blood serum peptide enrichment methods by Tricine SDS-PAGE and mass spectrometry.

scientific article

Comparison of detergent-based sample preparation workflows for LTQ-Orbitrap analysis of the Escherichia coli proteome

scientific article published on 7 August 2013

Critical Assessment of MetaProteome Investigation (CAMPI): a multi-laboratory comparison of established workflows

scientific article published on 15 December 2021

Critical comparison of sample preparation strategies for shotgun proteomic analysis of formalin-fixed, paraffin-embedded samples: insights from liver tissue.

scientific article published on 08 July 2014

Disseminating Metaproteomic Informatics Capabilities and Knowledge Using the Galaxy-P Framework

scientific article published on 31 January 2018

Diversity and functions of the sheep faecal microbiota: a multi-omic characterization.

scientific article

Draft Genome Sequence of Rhodotorula mucilaginosa, an Emergent Opportunistic Pathogen.

scientific article published on 9 April 2015

Enrichment or depletion? The impact of stool pretreatment on metaproteomic characterization of the human gut microbiota

scientific article published on 11 February 2015

Evaluating the impact of different sequence databases on metaproteome analysis: insights from a lab-assembled microbial mixture

scientific article

Evaluation of the suitability of archival Bouin-fixed paraffin-embedded tissue specimens to proteomic investigation.

scientific article

Fecal Metaproteomic Analysis Reveals Unique Changes of the Gut Microbiome Functions After Consumption of Sourdough Carasau Bread

scientific article published on 30 July 2019

Full-length protein extraction protocols and gel-based downstream applications in formalin-fixed tissue proteomics.

scientific article published on January 2015

Generation of high-quality protein extracts from formalin-fixed, paraffin-embedded tissues

scientific article published on 01 August 2009

High throughput genomic and proteomic technologies in the fight against infectious diseases

scientific article published on 14 March 2013

Impact of fixation time on GeLC-MS/MS proteomic profiling of formalin-fixed, paraffin-embedded tissues.

scientific article

Investigation of HER2 expression in canine mammary tumors by antibody-based, transcriptomic and mass spectrometry analysis: is the dog a suitable animal model for human breast cancer?

scientific article

Metaproteogenomics Reveals Taxonomic and Functional Changes between Cecal and Fecal Microbiota in Mouse.

scientific article published on 14 March 2017

Multi-Omic Biogeography of the Gastrointestinal Microbiota of a Pre-Weaned Lamb

scientific article published on 18 December 2017

Potential and active functions in the gut microbiota of a healthy human cohort

scientific article

Protective major histocompatibility complex allele prevents type 1 diabetes by shaping the intestinal microbiota early in ontogeny.

scientific article published on 22 August 2017

Protein expression changes induced in a malignant melanoma cell line by the curcumin analogue compound D6.

scientific article

Proteomic analysis of Rhodotorula mucilaginosa: dealing with the issues of a non-conventional yeast

scientific article published on 14 March 2016

Proteomic analysis of formalin-fixed, paraffin-embedded lung neuroendocrine tumor samples from hospital archives.

scientific article

Proteomic characterization of hepatitis C eradication: enzyme switch in the healing liver.

scientific article published on 23 March 2013

Proteomics and pathway analyses of the milk fat globule in sheep naturally infected by Mycoplasma agalactiae provide indications of the in vivo response of the mammary epithelium to bacterial infection.

scientific article

Setting proteins free: progresses and achievements in proteomics of formalin-fixed, paraffin-embedded tissues.

scientific article published on 27 December 2011

The Sarda Sheep Host Fecal Proteome

scientific article published on 12 January 2018

The bovine milk microbiota: insights and perspectives from -omics studies

scientific article

The impact of sequence database choice on metaproteomic results in gut microbiota studies

scientific article published on 27 September 2016

Time-restricted feeding induces Lactobacillus- and Akkermansia-specific functional changes in the rat fecal microbiota

scientific article published on 03 December 2021

Unipept 4.0: Functional Analysis of Metaproteome Data

scientific article published on 04 December 2018

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