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List of works by Peter Dawyndt

A Knuckles-and-Nodes Approach to the Integration of Microbiological Resource Data

A Long Fragment Aligner called ALFALFA.

scientific article published on 15 May 2015

Action potential duration heterogeneity of cardiac tissue can be evaluated from cell properties using Gaussian Green's function approach

scientific article

Application of multilocus sequence analysis (MLSA) for rapid identification of Enterococcus species based on rpoA and pheS genes

scientific article published in July 2005

Application of sliding-window discretization and minimization of stochastic complexity for the analysis of fAFLP genotyping fingerprint patterns of Vibrionaceae.

scientific article

BOX-PCR Fingerprinting as a Powerful Tool to Reveal Synonymous Names in the Genus Streptomyces. Emended Descriptions are Proposed for the Species Streptomyces cinereorectus, S. fradiae, S. tricolor, S. colombiensis, S. filamentosus, S. vinaceus and S

article

Bayesian clustering of fuzzy feature vectors using a quasi-likelihood approach

scientific article published in January 2009

Blink: An Educational Software Debugger for Scratch

scientific article published on 29 June 2023

Comment la bio-informatique et les droits de propriété intellectuelle contribuent au partage de l'information biologique

Contributions of bioinformatics and intellectual property rights in sharing biological information

Data shopping in an open marketplace: Introducing the Ontogrator web application for marking up data using ontologies and browsing using facets

scientific article

Diversity of 746 heterotrophic bacteria isolated from microbial mats from ten Antarctic lakes.

scientific article

Dolos 2.0: Towards Seamless Source Code Plagiarism Detection in Online Learning Environments

scientific article published on 29 June 2023

Ecological diversification in the Bacillus cereus Group.

scientific article

Faecal proteomics: A tool to investigate dysbiosis and inflammation in patients with cystic fibrosis.

scientific article published on 29 August 2015

Fame-based Bacillus species identification using artificial neural networks.

scientific article

Filtering and ranking techniques for automated selection of high-quality 16S rRNA gene sequences

scientific article published on 22 October 2013

From learning taxonomies to phylogenetic learning: integration of 16S rRNA gene data into FAME-based bacterial classification

scientific article

Genomic Standards Consortium Projects

article

Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains

scientific article published in August 2014

Genomic standards consortium projects

scientific article

Genus-wide Bacillus species identification through proper artificial neural network experiments on fatty acid profiles.

scientific article

Improving interoperability between microbial information and sequence databases

scientific article published in December 2005

Initiation and dynamics of a spiral wave around an ionic heterogeneity in a model for human cardiac tissue

scientific article

Knowledge accumulation and resolution of data inconsistencies during the integration of microbial information sources

article by Peter Dawyndt et al published August 2005 in IEEE Transactions on Knowledge and Data Engineering

Larkinella insperata gen. nov., sp. nov., a bacterium of the phylum 'Bacteroidetes' isolated from water of a steam generator.

scientific article

Laying the foundation for a Genomic Rosetta Stone: creating information hubs through the use of consensus identifiers

scientific article published on June 2008

Make Histri: reconstructing the exchange history of bacterial and archaeal type strains

scientific article

Matrix-assisted laser desorption ionisation-time-of of-flight mass spectrometry of intact cells allows rapid identification of Burkholderia cepacia complex

scientific article

Meeting report: the fifth Genomic Standards Consortium (GSC) workshop

scientific article published in June 2008

Meeting report: the fourth Genomic Standards Consortium (GSC) workshop

scientific article published in June 2008

Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

scientific article

Mining fatty acid databases for detection of novel compounds in aerobic bacteria

scientific article published on 7 March 2006

Multifunctional sequence-defined macromolecules for chemical data storage

scientific article published in Nature Communications

New methods for the analysis of binarized BIOLOG GN data of Vibrio species: minimization of stochastic complexity and cumulative classification.

scientific article

Peat substrate amended with chitin modulates the N-cycle, siderophore and chitinase responses in the lettuce rhizobiome

scientific article published on 09 July 2019

Phylogeny and molecular identification of vibrios on the basis of multilocus sequence analysis.

scientific article

Prospects and limitations of full-text index structures in genome analysis ⬇️

scientific article published on May 13, 2012

RCN4GSC Meeting Report: Initiating a Testbed for Managing Data at the Interface of Biodiversity and Genomics/Metagenomics, May 2011 ⬇️

scientific article published on September 28, 2012

RCN4GSC Workshop Report: Modeling a Testbed for Managing Data at the Interface of Biodiversity and (Meta)Genomics, April 2011

scientific article

Raman microspectroscopy as an identification tool within the phylogenetically homogeneous 'Bacillus subtilis' group

scientific article published on 24 March 2006

Reclassification of Lactobacillus kefirgranum Takizawa et al. 1994 as Lactobacillus kefiranofaciens subsp. kefirgranum subsp. nov. and emended description of L. kefiranofaciens Fujisawa et al. 1988.

scientific article

Reclassification of [Cytophaga] marinoflava Reichenbach 1989 as Leeuwenhoekiella marinoflava gen. nov., comb. nov. and description of Leeuwenhoekiella aequorea sp. nov.

scientific article

Reproducing Predictive Learning Analytics in CS1

scientific article published on 26 January 2024

Semantic integration of isolation habitat and location in StrainInfo.

scientific article published on 6 October 2010

Sliding window discretization: a new method for multiple band matching of bacterial genotyping fingerprints

scientific article published in November 2004

Small size ionic heterogeneities in the human heart can attract rotors

scientific article

Staphylococcus pseudintermedius sp. nov., a coagulase-positive species from animals

scientific article published in July 2005

Stepping stones towards a new prokaryotic taxonomy

scientific article

StrainInfo introduces electronic passports for microorganisms.

scientific article published on 08 December 2013

TaxonGap: a visualization tool for intra- and inter-species variation among individual biomarkers.

scientific article

The Genomic Standards Consortium

scientific article (publication date: June 2011)

The Unipept metaproteomics analysis pipeline

scientific article

The minimum information about a genome sequence (MIGS) specification

scientific article

The “Minimum Information about an ENvironmental Sequence” (MIENS) specification

The “Minimum Information about an ENvironmental Sequence” (MIENS) specification

Towards large-scale FAME-based bacterial species identification using machine learning techniques

scientific article

Unipept: tryptic peptide-based biodiversity analysis of metaproteome samples.

scientific article

Use of recA as an alternative phylogenetic marker in the family Vibrionaceae

scientific article

essaMEM: finding maximal exact matches using enhanced sparse suffix arrays

scientific article published on 24 January 2013

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