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List of works by Clement Jonquet

A System for Ontology-Based Annotation of Biomedical Data

article

A UIMA wrapper for the NCBO annotator

scientific article

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture

article

AgroPortal: A vocabulary and ontology repository for agronomy

Agronomic Linked Data (AgroLD): A knowledge-based system to enable integrative biology in agronomy

scientific article published in PLoS ONE

BIOTEX: A system for Biomedical Terminology Extraction, Ranking, and Validation

scientific article published in proceedings of the iswc 2014 posters & demonstrations track

BioPortal: A Web Repository for Biomedical Ontologies and Data Resources

scientific article published in iswc2008 posters and demonstrations

BioPortal: Ontologies and Integrated Data Resources at the Click of a Mouse

scientific article published in 2009

Building a biomedical ontology recommender web service

scientific article (publication date: 22 June 2010)

Challenges for ontology repositories and applications to biomedicine & agronomy ⬇️

Comparison of concept recognizers for building the Open Biomedical Annotator

scientific article

Developing data interoperability using standards: A wheat community use case

scientific article published in 2017

Developing data interoperability using standards: A wheat community use case.

scientific article published on 16 October 2017

Enhanced functionalities for annotating and indexing clinical text with the NCBO Annotator.

scientific article published in June 2018

FAIRness Literacy: The Achilles’ Heel of Applying FAIR Principles

scientific article published on 11 August 2020

Harnessing the Power of Unified Metadata in an Ontology Repository: The Case of AgroPortal

IndustryPortal: a Common Repository for FAIR Ontologies in Industry 4.0

scientific article published in proceedings of the iswc 2023 posters, demos and industry tracks: from novel ideas to industrial practice

MuEVo, a Breast Cancer Consumer Health Vocabulary Built Out of Web Forums ⬇️

article

NCBO Ontology Recommender 2.0: an enhanced approach for biomedical ontology recommendation

scientific article

NCBO Resource Index: Ontology-Based Search and Mining of Biomedical Resources

scientific article

New Generation Metadata Vocabulary for Ontology Description and Publication

scholarly article published in 2017

Ontology-driven indexing of public datasets for translational bioinformatics

scientific article

Optimize First, Buy Later: Analyzing Metrics to Ramp-Up Very Large Knowledge Bases

article published in 2010

SIFR annotator: ontology-based semantic annotation of French biomedical text and clinical notes

article

Scoring Semantic Annotations Returned by The NCBO Annotator ⬇️

THE STROBE MODEL: DYNAMIC SERVICE GENERATION ON THE GRID

The Lexicon Builder Web service: Building Custom Lexicons from two hundred Biomedical Ontologies

scientific article

The open biomedical annotator

scientific article

Towards a Mixed Approach to Extract Biomedical Terms from Text Corpus

scientific article published in 2014

ViewpointS: capturing formal data and informal contributions into an adaptive knowledge graph

scientific article published on 31 May 2018

ViewpointS: capturing formal data and informal contributions into an adaptive knowledge graph

scientific article published on 06 April 2018

What Four Million Mappings Can Tell You about Two Hundred Ontologies

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