List of works - Gerard Lazo

A 2600-locus chromosome bin map of wheat homoeologous group 2 reveals interstitial gene-rich islands and colinearity with rice.

scientific article

A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor

scientific article published on 22 April 2013

A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat

scientific article

A DNA transformation-competent Arabidopsis genomic library in Agrobacterium.

scientific article

A chromosome bin map of 16,000 expressed sequence tag loci and distribution of genes among the three genomes of polyploid wheat.

scientific article

A chromosome bin map of 2148 expressed sequence tag loci of wheat homoeologous group 7.

scientific article

A whole-genome, radiation hybrid mapping resource of hexaploid wheat

scientific article published on 4 March 2016

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture

article

Analysis of expressed sequence tag loci on wheat chromosome group 4

scientific article published in October 2004

Analysis of expressed sequence tags and the identification of associated short tandem repeats in switchgrass.

scientific article published in September 2005

Analysis of the wheat endosperm transcriptome

scientific article published on 01 January 2006

BatchPrimer3: a high throughput web application for PCR and sequencing primer design

scientific article

Chromosome bin map of expressed sequence tags in homoeologous group 1 of hexaploid wheat and homoeology with rice and Arabidopsis.

scientific article

Comparative systems biology reveals allelic variation modulating Tocochromanol profiles in Barley (Hordeum vulgare L.).

scientific article

Comparison of a high-density genetic linkage map to genome features in the model grass Brachypodium distachyon

scientific article published on 20 May 2011

ConservedPrimers 2.0: a high-throughput pipeline for comparative genome referenced intron-flanking PCR primer design and its application in wheat SNP discovery

scientific article

Construction and characterization of two BAC libraries from Brachypodium distachyon, a new model for grass genomics

scientific article

Construction and evaluation of cDNA libraries for large-scale expressed sequence tag sequencing in wheat (Triticum aestivum L.).

scientific article published in October 2004

De novo transcriptome assembly and analyses of gene expression during photomorphogenesis in diploid wheat Triticum monococcum

scientific article

Deletion mapping of homoeologous group 6-specific wheat expressed sequence tags

scientific article

Development of a D genome specific marker resource for diploid and hexaploid wheat.

scientific article published on 28 August 2015

Development of an expressed sequence tag (EST) resource for wheat (Triticum aestivum L.): EST generation, unigene analysis, probe selection and bioinformatics for a 16,000-locus bin-delineated map.

scientific article published in October 2004

EST sequencing and phylogenetic analysis of the model grass Brachypodium distachyon

scientific article published on 18 May 2006

Farinin: characterization of a novel wheat endosperm protein belonging to the prolamin superfamily

scientific article published on 4 March 2013

Frequencies of Ty1- copia and Ty3- gypsy retroelements within the Triticeae EST databases

scientific article published on 08 February 2002

Generation and characterization of the Western Regional Research Center Brachypodium T-DNA insertional mutant collection

scientific article

GenoProfiler: batch processing of high-throughput capillary fingerprinting data

scientific article

Genome comparisons reveal a dominant mechanism of chromosome number reduction in grasses and accelerated genome evolution in Triticeae.

scientific article published on 26 August 2009

GrainGenes 2.0. an improved resource for the small-grains community

article

GrainGenes: centralized small grain resources and digital platform for geneticists and breeders.

scientific article

Group 3 chromosome bin maps of wheat and their relationship to rice chromosome 1.

scientific article

Hybsweeper: a resource for detecting high-density plate gridding coordinates.

scientific article published in September 2005

Leymus EST linkage maps identify 4NsL-5NsL reciprocal translocation, wheat-Leymus chromosome introgressions, and functionally important gene loci

scientific article

Model SNP development for complex genomes based on hexaploid oat using high-throughput 454 sequencing technology.

scientific article

Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes

scientific article

Origin and evolution of the bread wheat D genome

scientific article published in 2024

PIECE: a database for plant gene structure comparison and evolution.

scientific article

Physical mapping resources for large plant genomes: radiation hybrids for wheat D-genome progenitor Aegilops tauschii.

scientific article

Plant and crop databases.

scientific article published on January 2009

RJPrimers: unique transposable element insertion junction discovery and PCR primer design for marker development.

scientific article

Radiation hybrid maps of the D-genome of Aegilops tauschii and their application in sequence assembly of large and complex plant genomes

scientific article published on 16 October 2015

SNP discovery and chromosome anchoring provide the first physically-anchored hexaploid oat map and reveal synteny with model species

scientific article

Structural characterization of Brachypodium genome and its syntenic relationship with rice and wheat

scientific article

Structural organization of the barley D-hordein locus in comparison with its orthologous regions of wheat genomes

scientific article

The complete chloroplast genome sequence of Brachypodium distachyon: sequence comparison and phylogenetic analysis of eight grass plastomes

scientific article

The nuclear genome of Brachypodium distachyon: analysis of BAC end sequences

scientific article published on 6 November 2007

The organization and rate of evolution of wheat genomes are correlated with recombination rates along chromosome arms

scientific article

The wheat omega-gliadin genes: structure and EST analysis

scientific article published on 15 April 2009

Transcriptional profiling of wheat caryopsis development using cDNA microarrays.

scientific article published on 9 January 2007

Transcriptome and gene expression analysis in cold-acclimated guayule (Parthenium argentatum) rubber-producing tissue

scientific article published on 17 May 2012

Types and rates of sequence evolution at the high-molecular-weight glutenin locus in hexaploid wheat and its ancestral genomes

scientific article

Use of a large-scale Triticeae expressed sequence tag resource to reveal gene expression profiles in hexaploid wheat (Triticum aestivum L.).

scientific article published in May 2006

Wheat Zapper: a flexible online tool for colinearity studies in grass genomes

scientific article

List of works by Gerard Lazo

A 2600-locus chromosome bin map of wheat homoeologous group 2 reveals interstitial gene-rich islands and colinearity with rice.

A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor

A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat

A DNA transformation-competent Arabidopsis genomic library in Agrobacterium.

A chromosome bin map of 16,000 expressed sequence tag loci and distribution of genes among the three genomes of polyploid wheat.

A chromosome bin map of 2148 expressed sequence tag loci of wheat homoeologous group 7.

A whole-genome, radiation hybrid mapping resource of hexaploid wheat

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture

Analysis of expressed sequence tag loci on wheat chromosome group 4

Analysis of expressed sequence tags and the identification of associated short tandem repeats in switchgrass.

Analysis of the wheat endosperm transcriptome

BatchPrimer3: a high throughput web application for PCR and sequencing primer design

Chromosome bin map of expressed sequence tags in homoeologous group 1 of hexaploid wheat and homoeology with rice and Arabidopsis.

Comparative systems biology reveals allelic variation modulating Tocochromanol profiles in Barley (Hordeum vulgare L.).

Comparison of a high-density genetic linkage map to genome features in the model grass Brachypodium distachyon

ConservedPrimers 2.0: a high-throughput pipeline for comparative genome referenced intron-flanking PCR primer design and its application in wheat SNP discovery

Construction and characterization of two BAC libraries from Brachypodium distachyon, a new model for grass genomics

Construction and evaluation of cDNA libraries for large-scale expressed sequence tag sequencing in wheat (Triticum aestivum L.).

De novo transcriptome assembly and analyses of gene expression during photomorphogenesis in diploid wheat Triticum monococcum

Deletion mapping of homoeologous group 6-specific wheat expressed sequence tags

Development of a D genome specific marker resource for diploid and hexaploid wheat.

Development of an expressed sequence tag (EST) resource for wheat (Triticum aestivum L.): EST generation, unigene analysis, probe selection and bioinformatics for a 16,000-locus bin-delineated map.

EST sequencing and phylogenetic analysis of the model grass Brachypodium distachyon

Farinin: characterization of a novel wheat endosperm protein belonging to the prolamin superfamily

Frequencies of Ty1- copia and Ty3- gypsy retroelements within the Triticeae EST databases

Generation and characterization of the Western Regional Research Center Brachypodium T-DNA insertional mutant collection

GenoProfiler: batch processing of high-throughput capillary fingerprinting data

Genome comparisons reveal a dominant mechanism of chromosome number reduction in grasses and accelerated genome evolution in Triticeae.

GrainGenes 2.0. an improved resource for the small-grains community

GrainGenes: centralized small grain resources and digital platform for geneticists and breeders.

Group 3 chromosome bin maps of wheat and their relationship to rice chromosome 1.

Hybsweeper: a resource for detecting high-density plate gridding coordinates.

Leymus EST linkage maps identify 4NsL-5NsL reciprocal translocation, wheat-Leymus chromosome introgressions, and functionally important gene loci

Model SNP development for complex genomes based on hexaploid oat using high-throughput 454 sequencing technology.

Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes

Origin and evolution of the bread wheat D genome

PIECE: a database for plant gene structure comparison and evolution.

Physical mapping resources for large plant genomes: radiation hybrids for wheat D-genome progenitor Aegilops tauschii.

Plant and crop databases.

RJPrimers: unique transposable element insertion junction discovery and PCR primer design for marker development.

Radiation hybrid maps of the D-genome of Aegilops tauschii and their application in sequence assembly of large and complex plant genomes

SNP discovery and chromosome anchoring provide the first physically-anchored hexaploid oat map and reveal synteny with model species

Structural characterization of Brachypodium genome and its syntenic relationship with rice and wheat

Structural organization of the barley D-hordein locus in comparison with its orthologous regions of wheat genomes

The complete chloroplast genome sequence of Brachypodium distachyon: sequence comparison and phylogenetic analysis of eight grass plastomes

The nuclear genome of Brachypodium distachyon: analysis of BAC end sequences

The organization and rate of evolution of wheat genomes are correlated with recombination rates along chromosome arms

The wheat omega-gliadin genes: structure and EST analysis

Transcriptional profiling of wheat caryopsis development using cDNA microarrays.

Transcriptome and gene expression analysis in cold-acclimated guayule (Parthenium argentatum) rubber-producing tissue

Types and rates of sequence evolution at the high-molecular-weight glutenin locus in hexaploid wheat and its ancestral genomes

Use of a large-scale Triticeae expressed sequence tag resource to reveal gene expression profiles in hexaploid wheat (Triticum aestivum L.).

Wheat Zapper: a flexible online tool for colinearity studies in grass genomes