List of works - Alexandra Pavlova

A tale of two flatties: different responses of two terrestrial flatworms to past environmental climatic fluctuations at Tallaganda in montane southeastern Australia

scientific article published in December 2006

Accounting for cryptic population substructure enhances detection of inbreeding depression with genomic inbreeding coefficients: an example from a critically endangered marsupial

scientific article published on 06 July 2020

Aquatic communities in arid landscapes: local conditions, dispersal traits and landscape configuration determine local biodiversity

scientific article published in 2015

Artificial barriers prevent genetic recovery of small isolated populations of a low-mobility freshwater fish.

scientific article

Barn swallows before barns: population histories and intercontinental colonization

article

Climate-driven mitochondrial selection: A test in Australian songbirds

scientific article published on 15 January 2018

Concordant divergence of mitogenomes and a mitonuclear gene cluster in bird lineages inhabiting different climates

article

De novo genome assembly and annotation of Australia's largest freshwater fish, the Murray cod (Maccullochella peelii), from Illumina and Nanopore sequencing read

scientific article published on August 2017

Different post-Pleistocene histories of Eurasian parids

scientific article published on 14 July 2006

Disrupted fine-scale population processes in fragmented landscapes despite large-scale genetic connectivity for a widespread and common cooperative breeder: the superb fairy-wren (Malurus cyaneus).

scientific article

Does reduced mobility through fragmented landscapes explain patch extinction patterns for three honeyeaters?

scientific article

Easy‐to‐use <i>R</i> functions to separate reduced‐representation genomic datasets into sex‐linked and autosomal loci, and conduct sex assignment

scientific article published in 2023

Evolutionary divergence in freshwater insects with contrasting dispersal capacity across a sea of desert

Evolutionary history and genetic connectivity across highly fragmented populations of an endangered daisy

scientific article published in 2021

Evolutionary history, population genetics, and gene flow in the common rosefinch (Carpodacus erythrinus).

scientific article

Evolutionary refugia and ecological refuges: key concepts for conserving Australian arid zone freshwater biodiversity under climate change

scientific article

Fine-scale effects of habitat loss and fragmentation despite large-scale gene flow for some regionally declining woodland bird species

article

Genes and song: genetic and social connections in fragmented habitat in a woodland bird with limited dispersal

scientific article

Genomic evidence of neo-sex chromosomes in the eastern yellow robin

scientific article published on 01 December 2019

Genomic evidence of neo-sex chromosomes in the eastern yellow robin

scientific article published on 01 September 2019

Identifying environmental correlates of intraspecific genetic variation.

scientific article published on 8 June 2016

Integrating phylogeography and morphometrics to assess conservation merits and inform conservation strategies for an endangered subspecies of a common bird species

Integrative Approaches for Studying Mitochondrial and Nuclear Genome Co-evolution in Oxidative Phosphorylation

scientific article published on 03 March 2017

Lifetime Fitness Costs of Inbreeding and Being Inbred in a Critically Endangered Bird

scientific article published on 01 August 2019

Little evidence that condition, stress indicators, sex ratio, or homozygosity are related to landscape or habitat attributes in declining woodland birds

MHC class II β exon 2 variation in pardalotes (Pardalotidae) is shaped by selection, recombination and gene conversion

scientific article

Mitochondrial DNA and plumage evolution in the white wagtailMotacilla alba

article

Mitochondrial DNA indicates late pleistocene divergence of populations of Heteronympha merope, an emerging model in environmental change biology

scientific article

Mitochondrial phylogeographies of five widespread Eurasian bird species

Mitochondrial-nuclear interactions maintain geographic separation of deeply diverged mitochondrial lineages in the face of nuclear gene flow

article

Neutral and selective drivers of colour evolution in a widespread Australian passerine

article

New data from basal Australian songbird lineages show that complex structure of MHC class II β genes has early evolutionary origins within passerines

scientific article

Perched at the mito-nuclear crossroads: divergent mitochondrial lineages correlate with environment in the face of ongoing nuclear gene flow in an Australian bird

scientific article published on 9 April 2013

Perpendicular axes of differentiation generated by mitochondrial introgression

scientific article published on 22 March 2017

Perpendicular axes of incipient speciation generated by mitochondrial introgression

Phylogeographic Patterns in Motacilla flava and Motacilla citreola: Species Limits and Population History

scientific article published in 2003

Pleistocene divergence across a mountain range and the influence of selection on mitogenome evolution in threatened Australian freshwater cod species

scientific article published on 17 February 2016

Pleistocene evolution of closely related sand martins Riparia riparia and R. diluta

scientific article published on 04 April 2008

Pleistocene-dated biogeographic barriers drove divergence within the Australo-Papuan region in a sex-specific manner: an example in a widespread Australian songbird

scientific article published on 15 March 2019

Population mitogenomics provides insights into evolutionary history, source of invasions and diversifying selection in the House Crow (Corvus splendens). ⬇️

scientific article published on 28 November 2017

Positive and purifying selection in mitochondrial genomes of a bird with mitonuclear discordance

scientific article published on 19 May 2015

Predicting landscape-genetic consequences of habitat loss, fragmentation and mobility for multiple species of woodland birds

scientific article

Prevalence and diversity of avian haematozoa in three species of Australian passerine

article

Purifying selection and genetic drift shaped Pleistocene evolution of the mitochondrial genome in an endangered Australian freshwater fish

scientific article published on 4 January 2017

Scope for genetic rescue of an endangered subspecies though re-establishing natural gene flow with another subspecies.

scientific article published on 28 January 2016

Severe consequences of habitat fragmentation on genetic diversity of an endangered Australian freshwater fish: A call for assisted gene flow

scientific article

Signatures of polygenic adaptation associated with climate across the range of a threatened fish species with high genetic connectivity.

scientific article

Song parameters of the fuscous honeyeater Lichenostomus fuscus correlate with habitat characteristics in fragmented landscapes

article by Maria I. Goretskaia et al published February 2018 in Journal of Avian Biology

Species- and sex-specific connectivity effects of habitat fragmentation in a suite of woodland birds

scientific article

Swimming through sand: connectivity of aquatic fauna in deserts

scientific article published in 2015

Taxonomic status and evolutionary history of the Saxicola torquata complex

scientific article

Threatened populations of the Australian squirrel glider (Petaurus norfolcensis) show evidence of evolutionary distinctiveness on a Late Pleistocene timescale

article

Using genomics to characterize evolutionary potential for conservation of wild populations

scientific article

Using multiple sources during reintroduction of a locally extinct population benefits survival and reproduction of an endangered freshwater fish

Very Low Population Structure in a Highly Mobile and Wide-Ranging Endangered Bird Species

scientific article published on 9 December 2015

List of works by Alexandra Pavlova

A tale of two flatties: different responses of two terrestrial flatworms to past environmental climatic fluctuations at Tallaganda in montane southeastern Australia

Accounting for cryptic population substructure enhances detection of inbreeding depression with genomic inbreeding coefficients: an example from a critically endangered marsupial

Aquatic communities in arid landscapes: local conditions, dispersal traits and landscape configuration determine local biodiversity

Artificial barriers prevent genetic recovery of small isolated populations of a low-mobility freshwater fish.

Barn swallows before barns: population histories and intercontinental colonization

Climate-driven mitochondrial selection: A test in Australian songbirds

Concordant divergence of mitogenomes and a mitonuclear gene cluster in bird lineages inhabiting different climates

De novo genome assembly and annotation of Australia's largest freshwater fish, the Murray cod (Maccullochella peelii), from Illumina and Nanopore sequencing read

Different post-Pleistocene histories of Eurasian parids

Disrupted fine-scale population processes in fragmented landscapes despite large-scale genetic connectivity for a widespread and common cooperative breeder: the superb fairy-wren (Malurus cyaneus).

Does reduced mobility through fragmented landscapes explain patch extinction patterns for three honeyeaters?

Easy‐to‐use <i>R</i> functions to separate reduced‐representation genomic datasets into sex‐linked and autosomal loci, and conduct sex assignment

Evolutionary divergence in freshwater insects with contrasting dispersal capacity across a sea of desert

Evolutionary history and genetic connectivity across highly fragmented populations of an endangered daisy

Evolutionary history, population genetics, and gene flow in the common rosefinch (Carpodacus erythrinus).

Evolutionary refugia and ecological refuges: key concepts for conserving Australian arid zone freshwater biodiversity under climate change

Fine-scale effects of habitat loss and fragmentation despite large-scale gene flow for some regionally declining woodland bird species

Genes and song: genetic and social connections in fragmented habitat in a woodland bird with limited dispersal

Genomic evidence of neo-sex chromosomes in the eastern yellow robin

Genomic evidence of neo-sex chromosomes in the eastern yellow robin

Identifying environmental correlates of intraspecific genetic variation.

Integrating phylogeography and morphometrics to assess conservation merits and inform conservation strategies for an endangered subspecies of a common bird species

Integrative Approaches for Studying Mitochondrial and Nuclear Genome Co-evolution in Oxidative Phosphorylation

Lifetime Fitness Costs of Inbreeding and Being Inbred in a Critically Endangered Bird

Little evidence that condition, stress indicators, sex ratio, or homozygosity are related to landscape or habitat attributes in declining woodland birds

MHC class II β exon 2 variation in pardalotes (Pardalotidae) is shaped by selection, recombination and gene conversion

Mitochondrial DNA and plumage evolution in the white wagtailMotacilla alba

Mitochondrial DNA indicates late pleistocene divergence of populations of Heteronympha merope, an emerging model in environmental change biology

Mitochondrial phylogeographies of five widespread Eurasian bird species

Mitochondrial-nuclear interactions maintain geographic separation of deeply diverged mitochondrial lineages in the face of nuclear gene flow

Neutral and selective drivers of colour evolution in a widespread Australian passerine

New data from basal Australian songbird lineages show that complex structure of MHC class II β genes has early evolutionary origins within passerines

Perched at the mito-nuclear crossroads: divergent mitochondrial lineages correlate with environment in the face of ongoing nuclear gene flow in an Australian bird

Perpendicular axes of differentiation generated by mitochondrial introgression

Perpendicular axes of incipient speciation generated by mitochondrial introgression

Phylogeographic Patterns in Motacilla flava and Motacilla citreola: Species Limits and Population History

Pleistocene divergence across a mountain range and the influence of selection on mitogenome evolution in threatened Australian freshwater cod species

Pleistocene evolution of closely related sand martins Riparia riparia and R. diluta

Pleistocene-dated biogeographic barriers drove divergence within the Australo-Papuan region in a sex-specific manner: an example in a widespread Australian songbird

Population mitogenomics provides insights into evolutionary history, source of invasions and diversifying selection in the House Crow (Corvus splendens). ⬇️

Positive and purifying selection in mitochondrial genomes of a bird with mitonuclear discordance

Predicting landscape-genetic consequences of habitat loss, fragmentation and mobility for multiple species of woodland birds

Prevalence and diversity of avian haematozoa in three species of Australian passerine

Purifying selection and genetic drift shaped Pleistocene evolution of the mitochondrial genome in an endangered Australian freshwater fish

Scope for genetic rescue of an endangered subspecies though re-establishing natural gene flow with another subspecies.

Severe consequences of habitat fragmentation on genetic diversity of an endangered Australian freshwater fish: A call for assisted gene flow

Signatures of polygenic adaptation associated with climate across the range of a threatened fish species with high genetic connectivity.

Song parameters of the fuscous honeyeater Lichenostomus fuscus correlate with habitat characteristics in fragmented landscapes

Species- and sex-specific connectivity effects of habitat fragmentation in a suite of woodland birds

Swimming through sand: connectivity of aquatic fauna in deserts

Taxonomic status and evolutionary history of the Saxicola torquata complex

Threatened populations of the Australian squirrel glider (Petaurus norfolcensis) show evidence of evolutionary distinctiveness on a Late Pleistocene timescale

Using genomics to characterize evolutionary potential for conservation of wild populations

Using multiple sources during reintroduction of a locally extinct population benefits survival and reproduction of an endangered freshwater fish

Very Low Population Structure in a Highly Mobile and Wide-Ranging Endangered Bird Species