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List of works by Abhijit Mitra

Comparative modeling of thioredoxin glutathione reductase from Schistosoma mansoni: a multifunctional target for antischistosomal therapy

scientific article

Consequences of Mg2+ binding on the geometry and stability of RNA base pairs

scientific article published on 01 August 2018

Effects of point mutations on the thermostability of B. subtilis lipase: investigating nonadditivity.

scientific article published on 30 September 2016

Estimating Strengths of Individual Hydrogen Bonds in RNA Base Pairs: Toward a Consensus between Different Computational Approaches

scientific article published on 23 April 2019

Evidence for Hidden Involvement of N3-Protonated Guanine in RNA Structure and Function

scientific article published on 09 January 2019

Feasibility of occurrence of different types of protonated base pairs in RNA: a quantum chemical study

scientific article published in September 2014

Going beyond base-pairs: topology-based characterization of base-multiplets in RNA

scientific article published on 21 February 2019

Graph theoretic approach for studying correlated motions in biomolecules

Higher order structures involving post transcriptionally modified nucleobases in RNA

scholarly article in RSC Advances, vol. 7 no. 57, 2017

How Does Mg2+ Modulate the RNA Folding Mechanism: A Case Study of the G:C W:W Trans Basepair.

scientific article published on 12 May 2017

Interaction of size expanded DNA bases with small neutral gold nanoclusters

Mining Protein Sequence Databases for Remote Homologues That Can Display Considerable Domain Length Variations

Modeling the noncovalent interactions at the metabolite binding site in purine riboswitches.

scientific article

Non-canonical base pairing ⬇️

scholarly article

Non-canonical base pairs and higher order structures in nucleic acids: crystal structure database analysis

scientific article published in October 2006

Noncanonical Base Pairing in RNA: Topological and NBO Analysis of Hoogsteen Edge - Sugar Edge Interactions

article by Purshotam Sharma et al published 2008 in Lecture Notes in Computer Science

Pairing interactions between nucleobases and ligands in aptamer:ligand complexes of riboswitches: crystal structure analysis, classification, optimal structures, and accurate interaction energies

scientific article published on 17 July 2019

Protonation of base pairs in RNA: context analysis and quantum chemical investigations of their geometries and stabilities.

scientific article published on 21 January 2011

Quantum chemical studies of structures and binding in noncanonical RNA base pairs: the trans Watson-Crick:Watson-Crick family

scientific article published in June 2008

RNABP COGEST: a resource for investigating functional RNAs

scientific article

Reaction of 3,6-diphenyl-1,2,4,5-tetrazine with cis,cis-1,5-cyclooctadiene

Structural landscape of base pairs containing post-transcriptional modifications in RNA.

scientific article published on 24 March 2017

The Reaction of Aliphtic Diazo Compounds with Highly Electrophilic Ethylene Derivatives

The role of N7 protonation of guanine in determining the structure, stability and function of RNA base pairs.

scientific article published on 18 September 2015

Theoretical analysis of noncanonical base pairing interactions in RNA molecules

scientific article published on 01 August 2007

Trans Hoogsteen/sugar edge base pairing in RNA. Structures, energies, and stabilities from quantum chemical calculations

scientific article published in February 2009

Understanding the Thermostability and Activity of Bacillus subtilis Lipase Mutants: Insights from Molecular Dynamics Simulations

article

Unfolding Transitions of Peripheral Subunit Binding Domains Show Cooperative Behavior

scientific article published on 16 April 2019

Why Does Substitution of Thymine by 6-Ethynylpyridone Increase the Thermostability of DNA Double Helices?

scientific article published on 09 June 2014

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