List of works - Alexander Myburg

A Genome-Wide Association Study For Resistance To The Insect Pest Leptocybe invasa In Eucalyptus grandis Reveals Genomic Regions And Positional Candidate Defence Genes

scientific article published on 07 May 2020

A Standardized Synthetic Eucalyptus Transcription Factor and Promoter Panel for Re-engineering Secondary Cell Wall Regulation in Biomass and Bioenergy Crops

scientific article published on 16 January 2019

A high-density Diversity Arrays Technology (DArT) microarray for genome-wide genotyping in Eucalyptus

scientific article

A reference linkage map for Eucalyptus.

scientific article

A systems genetics analysis in Eucalyptus reveals coordination of metabolic pathways associated with xylan modification in wood-forming tissues

scientific article published on 20 July 2019

A time series transcriptome analysis of cassava (Manihot esculenta Crantz) varieties challenged with Ugandan cassava brown streak virus

scientific article published on 29 August 2017

Analysis of Orthologous SECONDARY WALL-ASSOCIATED NAC DOMAIN1 (SND1) Promotor Activity in Herbaceous and Woody Angiosperms

scientific article published on 18 September 2019

Analysis of cellulose synthase (CesA) promoter function in trees using Induced Somatic Sector Analysis (ISSA).

scientific article

Carbohydrate active enzyme domains from extreme thermophiles: components of a modular toolbox for lignocellulose degradation.

scientific article published on 6 November 2017

Cell wall-related proteins of unknown function: missing links in plant cell wall development

scientific article published on 28 March 2014

Cellulose factories: advancing bioenergy production from forest trees.

scientific article published on April 2012

Certification for gene-edited forests

scientific article published on 01 August 2019

Characterising the role of the Eucalyptus grandis SND2 promoter in secondary cell wall biosynthesis

scientific article

Chloroplast DNA phylogeography reveals the island colonisation route of Eucalyptus urophylla (Myrtaceae)

scientific article published in 2007

Combined de novo and genome guided assembly and annotation of the Pinus patula juvenile shoot transcriptome

scientific article

Comparative analysis of orthologous cellulose synthase promoters from Arabidopsis, Populus and Eucalyptus: evidence of conserved regulatory elements in angiosperms.

scientific article

Comparative analysis of plant carbohydrate active enZymes and their role in xylogenesis

scientific article published on 22 May 2015

Comparative interrogation of the developing xylem transcriptomes of two wood-forming species: Populus trichocarpa and Eucalyptus grandis

scientific article published on 6 February 2015

Complete genetic linkage maps from an interspecific cross between Fusarium circinatum and Fusarium subglutinans

scientific article published on 28 February 2007

Comprehensive genome-wide analysis of the Aux/IAA gene family in Eucalyptus: evidence for the role of EgrIAA4 in wood formation.

scientific article published on 9 January 2015

Coordinated genetic regulation of growth and lignin revealed by quantitative trait locus analysis of cDNA microarray data in an interspecific backcross of eucalyptus

scientific article

De novo assembled expressed gene catalog of a fast-growing Eucalyptus tree produced by Illumina mRNA-Seq.

scientific article

Defence transcriptome assembly and pathogenesis related gene family analysis in Pinus tecunumanii (low elevation)

article

Development and assessment of microarray-based DNA fingerprinting in Eucalyptus grandis.

scientific article published on 29 July 2004

Development of Eucalyptus tissue culture conditions for improved in vitro plant health and transformability

scientific article

Dual RNA-Seq Analysis of the Pine-Fusarium circinatum Interaction in Resistant (Pinus tecunumanii) and Susceptible (Pinus patula) Hosts

scientific article published on 04 September 2019

Dual RNA-Sequencing of Eucalyptus nitens during Phytophthora cinnamomi Challenge Reveals Pathogen and Host Factors Influencing Compatibility.

scientific article published on 2 March 2016

Established and new technologies reduce increasing pest and pathogen threats to Eucalypt plantations

scientific article published in 2013

Evidence for salicylic acid signalling and histological changes in the defence response of Eucalyptus grandis to Chrysoporthe austroafricana.

scientific article published on 28 March 2017

Explosive tandem and segmental duplications of multigenic families in Eucalyptus grandis

scientific article published on 13 March 2015

Expression profiling of putative Eucalyptus grandis defence marker genes in response to treatment with methyl jasmonate and salicylic acid

scientific article

Functional network analysis of genes differentially expressed during xylogenesis in soc1ful woody Arabidopsis plants

scientific article

Genetic Diversity Among Traditional Ethiopian Highland Maize Accessions Assessed by Simple Sequence Repeat (SSR) Markers

article by Yoseph Beyene et al published 26 October 2006 in Genet Resour Crop Evol

Genetic analysis of growth, morphology and pathogenicity in the F1 progeny of an interspecific cross between Fusarium circinatum and Fusarium subglutinans

article

Genetic architecture of transcript-level variation in differentiating xylem of a eucalyptus hybrid

scientific article

Genetic dissection of growth, wood basic density and gene expression in interspecific backcrosses of Eucalyptus grandis and E. urophylla

scientific article

Genetic dissection of transcript, metabolite, growth and wood property traits in an F2 pseudo-backcross pedigree of Eucalyptus grandis x E. urophylla.

scientific article

Genetic diversity and population structure analysis reveals the unique genetic composition of South African selected macadamia accessions

scientific article published in 2022

Genetic diversity in traditional Ethiopian highland maize accessions assessed by AFLP markers and morphological traits

Genetic mapping in forest trees: markers, linkage analysis and genomics

scientific article published in January 2004

Genetics of postzygotic isolation in Eucalyptus: whole-genome analysis of barriers to introgression in a wide interspecific cross of Eucalyptus grandis and E. globulus

scientific article

Genome-wide analysis of the lignin toolbox of Eucalyptus grandis

scientific article

Genome-wide association study identifies SNP markers and putative candidate genes for terpene traits important for Leptocybe invasa resistance in Eucalyptus grandis

scientific article published on 01 April 2022

Genome-wide characterization and expression profiling of the AUXIN RESPONSE FACTOR (ARF) gene family in Eucalyptus grandis.

scientific article

Genome-wide mapping of histone H3 lysine 4 trimethylation in Eucalyptus grandis developing xylem

scientific article published on 10 May 2015

Genomewide analysis of the lateral organ boundaries domain gene family in Eucalyptus grandis reveals members that differentially impact secondary growth.

scientific article published on 12 May 2017

Genomic characterization of DArT markers based on high-density linkage analysis and physical mapping to the Eucalyptus genome.

scientific article

Genomic characterization, high-density mapping and anchoring of DArT markers to the reference genome of Eucalyptus.

scientific article published on 13 September 2011

Genomic evidence of introgression and adaptation in a model subtropical tree species, Eucalyptus grandis

scientific article published on 02 September 2020

Genomic patterns of species diversity and divergence in Eucalyptus

scientific article published on 10 February 2015

Genomics, domestication, and evolution of forest trees

scientific article

Hardwood Tree Genomics: Unlocking Woody Plant Biology

article

High synteny and colinearity among Eucalyptus genomes revealed by high-density comparative genetic mapping

High-density genetic linkage maps with over 2,400 sequence-anchored DArT markers for genetic dissection in an F2 pseudo-backcross of Eucalyptus grandis × E. urophylla

scientific article published on 06 September 2011

Identification and functional evaluation of accessible chromatin associated with wood formation in Eucalyptus grandis

scientific article published on 14 June 2019

In planta expression of hyperthermophilic enzymes as a strategy for accelerated lignocellulosic digestion.

scientific article published on 13 September 2017

In silico comparative analysis of glycoside hydrolase (GH) family 10 endo-(1-4)-beta-xylanase genes from Eucalyptus grandis and Arabidopsis thaliana

scientific article

Induced somatic sector analysis of cellulose synthase (CesA) promoter regions in woody stem tissues.

scientific article published on 7 November 2012

Insect Gallers and Their Plant Hosts: From Omics Data to Systems Biology

scientific article

Insect egg-induced physiological changes and transcriptional reprogramming leading to gall formation

scientific article published on 30 October 2020

Integrated analysis and transcript abundance modelling of H3K4me3 and H3K27me3 in developing secondary xylem.

scientific article

Investigating Eucalyptus – pathogen and pest interactions to dissect broad spectrum defense mechanisms

scientific article

Investigating the molecular underpinnings underlying morphology and changes in carbon partitioning during tension wood formation in Eucalyptus.

scientific article published on 12 November 2014

Localization and Transcriptional Responses of Chrysoporthe austroafricana in Eucalyptus grandis Identify Putative Pathogenicity Factors.

scientific article published on 08 December 2016

Maize microarray annotation database

scientific article

Mapping QTL conferring resistance in maize to gray leaf spot disease caused by Cercospora zeina.

scientific article

Navigating the transcriptional roadmap regulating plant secondary cell wall deposition

scientific article

Network-based integration of systems genetics data reveals pathways associated with lignocellulosic biomass accumulation and processing

scientific article

Optimization of a plant regeneration and genetic transformation protocol for Eucalyptus clonal genotypes

scientific article

Organellar carbon metabolism is coordinated with distinct developmental phases of secondary xylem

scientific article published on 25 March 2019

Pathogenicity associated genes in Fusarium oxysporum f. sp. cubense race 4

article

Plant scientists celebrate new woody plant genome

scientific article published in June 2015

Population genetic analysis and phylogeny reconstruction in Eucalyptus (Myrtaceae) using high-throughput, genome-wide genotyping

scientific article

Progress in Myrtaceae genetics and genomics: Eucalyptus as the pivotal genus

article

Protein domain evolution is associated with reproductive diversification and adaptive radiation in the genus Eucalyptus

scientific article published on 11 December 2014

QTL Mapping for Pest and Disease Resistance in Cassava and Coincidence of Some QTL with Introgression Regions Derived from Manihot glaziovii

scientific article

Recombinant hyperthermophilic enzyme expression in plants: a novel approach for lignocellulose digestion.

scientific article published on 11 April 2014

SND2, a NAC transcription factor gene, regulates genes involved in secondary cell wall development in Arabidopsis fibres and increases fibre cell area in Eucalyptus.

scientific article

Structural, evolutionary and functional analysis of the NAC domain protein family in Eucalyptus.

scientific article published on 10 November 2014

Systems and Synthetic Biology of Forest Trees: A Bioengineering Paradigm for Woody Biomass Feedstocks

scientific article published on 20 June 2019

Systems genetics of wood formation

scientific article published on March 2016

Systems genetics reveals a transcriptional network associated with susceptibility in the maize-grey leaf spot pathosystem.

scientific article

Terpenes associated with resistance against the gall wasp, Leptocybe invasa, in Eucalyptus grandis

scientific article published on 01 June 2018

The Arabidopsis Domain of Unknown Function 1218 (DUF1218) Containing Proteins, MODIFYING WALL LIGNIN-1 and 2 (At1g31720/MWL-1 and At4g19370/MWL-2) Function Redundantly to Alter Secondary Cell Wall Lignin Content

scientific article

The Eucalyptus genome integrative explorer (EucGenIE): a resource for Eucalyptus genomics and transcriptomics

scientific article

The Eucalyptus grandis Genome Project: Genome and transcriptome resources for comparative analysis of woody plant biology

scientific article

The Eucalyptus grandis R2R3-MYB transcription factor family: evidence for woody growth-related evolution and function

scientific article published on 24 September 2014

The Eucalyptus terpene synthase gene family

scientific article

The Transcriptome and Terpene Profile of Eucalyptus grandis Reveals Mechanisms of Defense Against the Insect Pest, Leptocybe invasa

scientific article published on 05 May 2015

The floral transcriptome of Eucalyptus grandis.

scientific article published on 29 October 2014

The genome of Eucalyptus grandis

scientific article

The identification and differential expression of Eucalyptus grandis pathogenesis-related genes in response to salicylic acid and methyl jasmonate.

scientific article published on 6 March 2013

The plastid and mitochondrial genomes of Eucalyptus grandis

The role of SND2 in the regulation of Arabidopsis fibre secondary cell wall formation

scientific article

Transcriptome and hormone profiling reveals Eucalyptus grandis defence responses against Chrysoporthe austroafricana

scientific article published on 18 April 2015

Transmission ratio distortion in an interspecific cross between Fusarium circinatum and Fusarium subglutinans

Uncovering the defence responses of Eucalyptus to pests and pathogens in the genomics age.

scientific article

Xylan in the Middle: Understanding Xylan Biosynthesis and Its Metabolic Dependencies Toward Improving Wood Fiber for Industrial Processing

scientific article published in 2019

qtlXplorer: an online systems genetics browser in the Eucalyptus Genome Integrative Explorer (EucGenIE)

scientific article published on 15 December 2021

List of works by Alexander Myburg

A Genome-Wide Association Study For Resistance To The Insect Pest Leptocybe invasa In Eucalyptus grandis Reveals Genomic Regions And Positional Candidate Defence Genes

A Standardized Synthetic Eucalyptus Transcription Factor and Promoter Panel for Re-engineering Secondary Cell Wall Regulation in Biomass and Bioenergy Crops

A high-density Diversity Arrays Technology (DArT) microarray for genome-wide genotyping in Eucalyptus

A reference linkage map for Eucalyptus.

A systems genetics analysis in Eucalyptus reveals coordination of metabolic pathways associated with xylan modification in wood-forming tissues

A time series transcriptome analysis of cassava (Manihot esculenta Crantz) varieties challenged with Ugandan cassava brown streak virus

Analysis of Orthologous SECONDARY WALL-ASSOCIATED NAC DOMAIN1 (SND1) Promotor Activity in Herbaceous and Woody Angiosperms

Analysis of cellulose synthase (CesA) promoter function in trees using Induced Somatic Sector Analysis (ISSA).

Carbohydrate active enzyme domains from extreme thermophiles: components of a modular toolbox for lignocellulose degradation.

Cell wall-related proteins of unknown function: missing links in plant cell wall development

Cellulose factories: advancing bioenergy production from forest trees.

Certification for gene-edited forests

Characterising the role of the Eucalyptus grandis SND2 promoter in secondary cell wall biosynthesis

Chloroplast DNA phylogeography reveals the island colonisation route of Eucalyptus urophylla (Myrtaceae)

Combined de novo and genome guided assembly and annotation of the Pinus patula juvenile shoot transcriptome

Comparative analysis of orthologous cellulose synthase promoters from Arabidopsis, Populus and Eucalyptus: evidence of conserved regulatory elements in angiosperms.

Comparative analysis of plant carbohydrate active enZymes and their role in xylogenesis

Comparative interrogation of the developing xylem transcriptomes of two wood-forming species: Populus trichocarpa and Eucalyptus grandis

Complete genetic linkage maps from an interspecific cross between Fusarium circinatum and Fusarium subglutinans

Comprehensive genome-wide analysis of the Aux/IAA gene family in Eucalyptus: evidence for the role of EgrIAA4 in wood formation.

Coordinated genetic regulation of growth and lignin revealed by quantitative trait locus analysis of cDNA microarray data in an interspecific backcross of eucalyptus

De novo assembled expressed gene catalog of a fast-growing Eucalyptus tree produced by Illumina mRNA-Seq.

Defence transcriptome assembly and pathogenesis related gene family analysis in Pinus tecunumanii (low elevation)

Development and assessment of microarray-based DNA fingerprinting in Eucalyptus grandis.

Development of Eucalyptus tissue culture conditions for improved in vitro plant health and transformability

Dual RNA-Seq Analysis of the Pine-Fusarium circinatum Interaction in Resistant (Pinus tecunumanii) and Susceptible (Pinus patula) Hosts

Dual RNA-Sequencing of Eucalyptus nitens during Phytophthora cinnamomi Challenge Reveals Pathogen and Host Factors Influencing Compatibility.

Established and new technologies reduce increasing pest and pathogen threats to Eucalypt plantations

Evidence for salicylic acid signalling and histological changes in the defence response of Eucalyptus grandis to Chrysoporthe austroafricana.

Explosive tandem and segmental duplications of multigenic families in Eucalyptus grandis

Expression profiling of putative Eucalyptus grandis defence marker genes in response to treatment with methyl jasmonate and salicylic acid

Functional network analysis of genes differentially expressed during xylogenesis in soc1ful woody Arabidopsis plants

Genetic Diversity Among Traditional Ethiopian Highland Maize Accessions Assessed by Simple Sequence Repeat (SSR) Markers

Genetic analysis of growth, morphology and pathogenicity in the F1 progeny of an interspecific cross between Fusarium circinatum and Fusarium subglutinans

Genetic architecture of transcript-level variation in differentiating xylem of a eucalyptus hybrid

Genetic dissection of growth, wood basic density and gene expression in interspecific backcrosses of Eucalyptus grandis and E. urophylla

Genetic dissection of transcript, metabolite, growth and wood property traits in an F2 pseudo-backcross pedigree of Eucalyptus grandis x E. urophylla.

Genetic diversity and population structure analysis reveals the unique genetic composition of South African selected macadamia accessions

Genetic diversity in traditional Ethiopian highland maize accessions assessed by AFLP markers and morphological traits

Genetic mapping in forest trees: markers, linkage analysis and genomics

Genetics of postzygotic isolation in Eucalyptus: whole-genome analysis of barriers to introgression in a wide interspecific cross of Eucalyptus grandis and E. globulus

Genome-wide analysis of the lignin toolbox of Eucalyptus grandis

Genome-wide association study identifies SNP markers and putative candidate genes for terpene traits important for Leptocybe invasa resistance in Eucalyptus grandis

Genome-wide characterization and expression profiling of the AUXIN RESPONSE FACTOR (ARF) gene family in Eucalyptus grandis.

Genome-wide mapping of histone H3 lysine 4 trimethylation in Eucalyptus grandis developing xylem

Genomewide analysis of the lateral organ boundaries domain gene family in Eucalyptus grandis reveals members that differentially impact secondary growth.

Genomic characterization of DArT markers based on high-density linkage analysis and physical mapping to the Eucalyptus genome.

Genomic characterization, high-density mapping and anchoring of DArT markers to the reference genome of Eucalyptus.

Genomic evidence of introgression and adaptation in a model subtropical tree species, Eucalyptus grandis

Genomic patterns of species diversity and divergence in Eucalyptus

Genomics, domestication, and evolution of forest trees

Hardwood Tree Genomics: Unlocking Woody Plant Biology

High synteny and colinearity among Eucalyptus genomes revealed by high-density comparative genetic mapping

High-density genetic linkage maps with over 2,400 sequence-anchored DArT markers for genetic dissection in an F2 pseudo-backcross of Eucalyptus grandis × E. urophylla

Identification and functional evaluation of accessible chromatin associated with wood formation in Eucalyptus grandis

In planta expression of hyperthermophilic enzymes as a strategy for accelerated lignocellulosic digestion.

In silico comparative analysis of glycoside hydrolase (GH) family 10 endo-(1-4)-beta-xylanase genes from Eucalyptus grandis and Arabidopsis thaliana

Induced somatic sector analysis of cellulose synthase (CesA) promoter regions in woody stem tissues.

Insect Gallers and Their Plant Hosts: From Omics Data to Systems Biology

Insect egg-induced physiological changes and transcriptional reprogramming leading to gall formation

Integrated analysis and transcript abundance modelling of H3K4me3 and H3K27me3 in developing secondary xylem.

Investigating Eucalyptus – pathogen and pest interactions to dissect broad spectrum defense mechanisms

Investigating the molecular underpinnings underlying morphology and changes in carbon partitioning during tension wood formation in Eucalyptus.

Localization and Transcriptional Responses of Chrysoporthe austroafricana in Eucalyptus grandis Identify Putative Pathogenicity Factors.

Maize microarray annotation database

Mapping QTL conferring resistance in maize to gray leaf spot disease caused by Cercospora zeina.

Navigating the transcriptional roadmap regulating plant secondary cell wall deposition

Network-based integration of systems genetics data reveals pathways associated with lignocellulosic biomass accumulation and processing

Optimization of a plant regeneration and genetic transformation protocol for Eucalyptus clonal genotypes

Organellar carbon metabolism is coordinated with distinct developmental phases of secondary xylem

Pathogenicity associated genes in Fusarium oxysporum f. sp. cubense race 4

Plant scientists celebrate new woody plant genome

Population genetic analysis and phylogeny reconstruction in Eucalyptus (Myrtaceae) using high-throughput, genome-wide genotyping

Progress in Myrtaceae genetics and genomics: Eucalyptus as the pivotal genus

Protein domain evolution is associated with reproductive diversification and adaptive radiation in the genus Eucalyptus

QTL Mapping for Pest and Disease Resistance in Cassava and Coincidence of Some QTL with Introgression Regions Derived from Manihot glaziovii

Recombinant hyperthermophilic enzyme expression in plants: a novel approach for lignocellulose digestion.

SND2, a NAC transcription factor gene, regulates genes involved in secondary cell wall development in Arabidopsis fibres and increases fibre cell area in Eucalyptus.

Structural, evolutionary and functional analysis of the NAC domain protein family in Eucalyptus.