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List of works by Ivo Pavlík

"Mycobacterium avium subsp. hominissuis" in neck lymph nodes of children and their environment examined by culture and triplex quantitative real-time PCR.

scientific article

A low prevalence of mycobacteria in freshwater fish from water reservoirs, ponds and farms

scientific article published on 26 April 2012

A standardised restriction fragment length polymorphism (RFLP) method for typing Mycobacterium avium isolates links IS901 with virulence for birds

scientific article published in October 2003

Avian tuberculosis in naturally infected captive water birds of the Ardeideae and Threskiornithidae families studied by serotyping, IS901 RFLP typing, and virulence for poultry

scientific article published on 23 October 2006

BoLA DYA Polymorphism in Czech Cattle ⬇️

scientific article published on January 1, 1998

Cell-mediated immune response in swine infected with Mycobacterium avium subsp. avium

scientific article published on 14 April 2011

Characterization by restriction endonuclease analysis and DNA hybridization using IS900 of bovine, ovine, caprine and human dependent strains of Mycobacterium paratuberculosis isolated in various localities

article

Characterization of IS900 loci in Mycobacterium avium subsp. paratuberculosis and development of multiplex PCR typing

scientific article

Characterization of Mycobacterium caprae isolates from Europe by mycobacterial interspersed repetitive unit genotyping

scientific article

Characterization of Mycobacterium tuberculosis complex isolates from Greek patients with sarcoidosis by Spoligotyping

scientific article

Cloning and expression of the haloalkane dehalogenase gene dhmA from Mycobacterium avium N85 and preliminary characterization of DhmA.

scientific article

Cloning, biochemical properties, and distribution of mycobacterial haloalkane dehalogenases

scientific article

Comparative evaluation of PCR assays for the robust molecular detection of Mycobacterium avium subsp. paratuberculosis

scientific article published in March 2004

Comparative evaluation of positive tests to Mycobacterium avium subsp. paratuberculosis in clinically healthy sheep and goats in south-west Greece using molecular techniques, serology, and culture

scientific article

Comparison of the conventional culture, the manual fluorescent MGIT system and the automated fluorescent MGIT 960 culture system for the detection of Mycobacterium avium ssp. avium in tissues of naturally infected hens

article

Correlation of Mycobacterium avium subsp. paratuberculosis counts in gastrointestinal tract, muscles of the diaphragm and the masseter of dairy cattle and potential risk for consumers

scientific article

Culture- and Quantitative IS 900 Real-Time PCR-Based Analysis of the Persistence of Mycobacterium avium subsp. paratuberculosis in a Controlled Dairy Cow Farm Environment ⬇️

scientific article published on July 6, 2012

Detection and phylogenetic characterization of human hepatitis E virus strains, Czech Republic.

scientific article published in May 2011

Detection of Lawsonia intracellularis in wild boar and fallow deer bred in one game enclosure in the Czech Republic

scientific article

Detection of Mycobacterium avium subsp. paratuberculosis in retail cheeses from Greece and the Czech Republic.

scientific article published on December 2005

Determinants of the prevalence of Heligmosomum costellatum (Heligmosomidae: Trichostrongyloidea) in a common vole population in southern Moravia, Czech Republic

scientific article published on 17 March 2010

Development of a predictive model for detection of Mycobacterium avium subsp. paratuberculosis in faeces by quantitative real time PCR.

scientific article published on 21 October 2010

Different immune response of pigs to Mycobacterium avium subsp. avium and Mycobacterium avium subsp. hominissuis infection

article

Differentiation of Actinobacillus pleuropneumoniae by PCR-REA based on sequence variability of the apxIVA gene and by ribotyping

article

Diptera as vectors of mycobacterial infections in cattle and pigs

scientific article

Distribution of Mycobacterium avium complex isolates in tissue samples of pigs fed peat naturally contaminated with mycobacteria as a supplement.

scientific article

Distribution of Mycobacterium avium subsp. avium and M. a. hominissuis in artificially infected pigs studied by culture and IS901 and IS1245 quantitative real time PCR.

scientific article published on 20 February 2010

Distribution of Mycobacterium avium subsp. paratuberculosis in organs of naturally infected bull-calves and breeding bulls

scientific article published on 01 November 2004

Distribution of mycobacteria in clinically healthy ornamental fish and their aquarium environment

scientific article published on 01 July 2006

Earthworms (Oligochaeta, Lumbricidae) and mycobacteria

scientific article published on 01 February 2003

Effect of short- and long-term antibiotic exposure on the viability of Mycobacterium avium subsp. paratuberculosis as measured by propidium monoazide F57 real time quantitative PCR and culture

article

Endemic hepatitis E in the Czech Republic.

scientific article published on 26 November 2013

Enumeration of Mycobacterium avium subsp. paratuberculosis by quantitative real-time PCR, culture on solid media and optical densitometry.

scientific article

Epidemiology of paratuberculosis in wild ruminants studied by restriction fragment length polymorphism in the Czech Republic during the period 1995–1998

scientific article published on 01 December 2000

Findings of mycobacteria in insectivores and small rodents

scientific article published in January 2000

First isolation of a newly described Mycobacterium insubricum from freshwater fish

scientific article published on 16 December 2009

Further analysis of VNTR and MIRU in the genome of complex, and application to molecular epidemiology of isolates from South America

article

Genetic IS901 RFLP diversity among Mycobacterium avium subsp. avium isolates from four pheasant flocks.

scientific article published on 5 February 2013

Hepatitis E virus in pork production chain in Czech Republic, Italy, and Spain, 2010.

scientific article

High incidence of Mycobacterium avium subspecies hominissuis infection in a zoo population of bongo antelopes (Tragelaphus eurycerus).

scientific article

IS 1245 Restriction Fragment Length Polymorphism Typing of Mycobacterium avium Isolates: Proposal for Standardization ⬇️

scientific article published on October 1, 1998

IS1311 and IS1245 restriction fragment length polymorphism analyses, serotypes, and drug susceptibilities of Mycobacterium avium complex isolates obtained from a human immunodeficiency virus-negative patient.

scientific article

IS900 restriction fragment length polymorphism (RFLP) analysis of Mycobacterium avium subsp. paratuberculosis isolates from goats and cattle in Norway.

scientific article

Identification of members of Mycobacterium avium species by Accu-Probes, serotyping, and single IS900, IS901, IS1245 and IS901-flanking region PCR with internal standards

scientific article

Immunological and molecular characterization of susceptibility in relationship to bacterial strain differences in Mycobacterium avium subsp. paratuberculosis infection in the red deer (Cervus elaphus).

scientific article published on June 2006

Impact of sawdust and wood shavings in bedding on pig tuberculous lesions in lymph nodes, and IS1245 RFLP analysis of Mycobacterium avium subsp. hominissuis of serotypes 6 and 8 isolated from pigs and environment

scientific article

Molecular detection of nontuberculous mycobacteria: advantages and limits of a broad-range sequencing approach

scientific article published on 04 October 2012

Molecular fingerprinting of Mycobacterium bovis subsp. caprae isolates from central Europe

scientific article

Morphology and distribution of granulomatous inflammation in freshwater ornamental fish infected with mycobacteria

scientific article published on 01 December 2010

Multicenter Collaborative Trial Evaluation of a Method for Detection of Human Adenoviruses in Berry Fruit

Mycobacterial Screening of Czech Red Deer (Cervus elaphus) Populations in Overwintering Sites, 2004–2006 ⬇️

scientific article published on July 1, 2011

Mycobacterium avium Subsp. avium and Salmonella enterica serotype Typhimurium var. Copenhagen phage type DT2 in pigeons

scientific article published on 25 May 2011

Mycobacterium avium subsp. avium and Mycobacterium neoaurum detection in an immunocompromised patient.

scientific article published on 10 July 2013

Mycobacterium avium subsp. avium distribution studied in a naturally infected hen flock and in the environment by culture, serotyping and IS901 RFLP methods.

scientific article

Mycobacterium avium subsp. avium found in raptors exposed to infected domestic fowl

scientific article published in September 2013

Mycobacterium avium subsp. avium in Lymph Nodes and Diaphragms of Pigs from One Infected Herd in the Czech Republic

scientific article published on 01 January 2014

Mycobacterium avium subsp. hominissuis infection in a pet parrot.

scientific article published in April 2009

Mycobacterium avium subsp. paratuberculosis detected in the reproductive tract of cows from an infected herd.

scientific article published on 19 April 2013

Mycobacterium avium subsp. paratuberculosis survival during fermentation of soured milk products detected by culture and quantitative real time PCR methods

scientific article published in May 2012

Mycobacterium avium subsp. paratuberculosis viability determination using F57 quantitative PCR in combination with propidium monoazide treatment.

scientific article published on 19 March 2010

Mycobacterium avium subspecies paratuberculosis cultured from locally and commercially pasteurized cow's milk in the Czech Republic

scientific article

Mycobacterium marinum epididymoorchitis: case report and literature review.

scientific article published on 02 July 2011

Mycobacterium marinum infections in humans and tracing of its possible environmental sources

scientific article published on 19 December 2011

Nontuberculous Mycobacteria as Sapronoses: A Review

scientific article published in 2022

Nontuberculous mycobacteria in freshwater fish and fish products intended for human consumption.

scientific article published on 24 April 2013

Nontuberculous mycobacteria in the environment of Hranice Abyss, the world's deepest flooded cave (Hranice karst, Czech Republic)

scholarly article by Ivo Pavlík et al published 6 June 2018 in Environmental Science and Pollution Research

Nymphs of the Oriental cockroach (Blatta orientalis) as passive vectors of causal agents of avian tuberculosis and paratuberculosis

scientific article published in June 2003

Occurrence of Mycobacterium avium subspecies paratuberculosis across host species and European countries with evidence for transmission between wildlife and domestic ruminants

scientific article published on 7 October 2009

On-farm spread of Mycobacterium avium subsp. paratuberculosis in raw milk studied by IS900 and F57 competitive real time quantitative PCR and culture examination

scientific article

Optimisation of a triplex real time RT-PCR for detection of hepatitis E virus RNA and validation on biological samples ⬇️

scientific article published on December 22, 2011

Outbreak of Mycobacterium avium subsp. avium infection in one flock of domestic pigeons

scientific article published in September 2011

Outbreak of Tuberculosis Caused by Mycobacterium caprae in a Zoological Garden

scientific article published on 01 October 2006

Parallel faecal and organ Mycobacterium avium subsp. paratuberculosis culture of different productivity types of cattle

article

Paratuberculosis and avian tuberculosis infections in one red deer farm studied by IS900 and IS901 RFLP analysis.

scientific article published on 22 January 2005

Paratuberculosis in farmed and free-living wild ruminants in the Czech Republic (1999-2001).

scientific article published in August 2004

Persistence of Mycobacterium avium subsp. paratuberculosis at a farm-scale biogas plant supplied with manure from paratuberculosis-affected dairy cattle.

scientific article published on 11 March 2011

Potential risk of Mycobacterium avium subspecies paratuberculosis spread by syrphid flies in infected cattle farms.

scientific article published in December 2005

Prevalence of Neospora caninum and Toxoplasma gondii antibodies in wild ruminants from the countryside or captivity in the Czech Republic.

scientific article published in October 2007

Rapid detection methods for viable Mycobacterium avium subspecies paratuberculosis in milk and cheese.

scientific article published on 16 March 2010

Real-time quantitative PCR detection of Mycobacterium avium subspecies in meat products

scientific article

Relative prevalence ofMycobacterium marinumin fish collected from aquaria and natural freshwaters in central Europe ⬇️

scientific article published on August 16, 2013

Short communication: Examination of milk filters by real-time PCR as a herd-level indicator of the presence of Mycobacterium avium subspecies paratuberculosis in dairy herds.

scientific article published in March 2012

Soil and plant contamination with Mycobacterium avium subsp. paratuberculosis after exposure to naturally contaminated mouflon feces.

scientific article published on 29 January 2011

Spread of Mycobacterium avium subsp. paratuberculosis Through Soil and Grass on a Mouflon (Ovis aries) Pasture

scientific article published on 01 June 2014

Standardisation of restriction fragment length polymorphism analysis for Mycobacterium avium subspecies paratuberculosis

article

Strategy for the detection and differentiation of Mycobacterium avium species in isolates and heavily infected tissues

article

Study of Mycobacterium avium complex strains isolated from cattle in the Czech Republic between 1996 and 2000.

scientific article

The tracing of mycobacteria in drinking water supply systems by culture, conventional, and real time PCRs.

scientific article published on 31 July 2013

Usability of a gamma interferon release assay in the diagnosis of naturally infected pigs with Mycobacterium avium subspecies hominissuis

scientific article published on 7 February 2012

Various stages in the life cycle of syrphid flies (Eristalis tenax; Diptera: Syrphidae) as potential mechanical vectors of pathogens causing mycobacterial infections in pig herds

scientific article published in January 2006

Virological Quality of Irrigation Water in Leafy Green Vegetables and Berry Fruits Production Chains

scientific article

Bezobratlí živočichové v regionálním rozvoji Nikaragui: region Carazo

book edition published in 2017

Chladnokrevní obratlovci v Nikaragui a její regionální rozvoj

book edition published in 2018

Divocí ptáci a savci Nikaragui a její regionální rozvoj

book edition published in 2022

Rizika rozvoje regionu: význam onemocnění lidí a zvířat v rozvinutém regionu

book edition published in 2015

Význam onemocnění lidí a zvířat při rozvoji regionů

book edition published in 2015

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