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List of works by Peter Nilsson

A High-throughput Bead-based Affinity Assay Enables Analysis of Genital Protein Signatures in Women At Risk of HIV Infection

scientific article published on 30 November 2018

A Populus EST resource for plant functional genomics

scholarly article

A Preliminary Report: Radical Surgery and Stem Cell Transplantation for the Treatment of Patients With Pancreatic Cancer

scientific article published on 23 March 2017

A genecentric Human Protein Atlas for expression profiles based on antibodies

scientific article published on October 2008

A genomic approach to investigate developmental cell death in woody tissues of Populus trees

scientific article

A global view of protein expression in human cells, tissues, and organs

scientific article

A high-resolution transcript profile across the wood-forming meristem of poplar identifies potential regulators of cambial stem cell identity

scientific article

A high-throughput strategy for protein profiling in cell microarrays using automated image analysis

scientific article published on June 2007

A human protein atlas for normal and cancer tissues based on antibody proteomics

scientific article

A lateral flow protein microarray for rapid and sensitive antibody assays

scientific article published on 9 November 2011

A pathology atlas of the human cancer transcriptome

scientific article

A roadmap to generate renewable protein binders to the human proteome

scientific article (publication date: 15 May 2011)

A subcellular map of the human proteome

scientific article

A transcriptional roadmap to wood formation

scientific article

A transcriptional timetable of autumn senescence

scientific article

A valve-less diffuser micropump for microfluidic analytical systems

article by Helene Andersson et al published February 2001 in Sensors and Actuators B

Affinity proteomic profiling of plasma, cerebrospinal fluid, and brain tissue within multiple sclerosis.

scientific article published in October 2014

Affinity proteomics discovers decreased levels of AMFR in plasma from Osteoporosis patients.

scientific article published on 16 February 2015

Affinity proteomics reveals elevated muscle proteins in plasma of children with cerebral malaria

scientific article

Affinity proteomics within rare diseases: a BIO-NMD study for blood biomarkers of muscular dystrophies

scientific article

Amplification of mRNA populations by a cDNA tag strategy

scientific article published in February 2004

Analysis of Autoantibody Profiles in Osteoarthritis Using Comprehensive Protein Array Concepts

article

Analysis of Oligonucleotide Probe Affinities Using Surface Plasmon Resonance: A Means for Mutational Scanning

scientific article published on 01 March 1997

Analysis of the Cerebrospinal Fluid Proteome in Alzheimer's Disease

scientific article

Analysis of the human tissue-specific expression by genome-wide integration of transcriptomics and antibody-based proteomics

scientific article published on 05 December 2013

Anoctamin 2 identified as an autoimmune target in multiple sclerosis

scientific article

Anti-citrullinated protein antibodies cause arthritis by cross-reactivity to joint cartilage

scientific article

Antibodies in children with malaria to PfEMP1, RIFIN and SURFIN expressed at the Plasmodium falciparum parasitized red blood cell surface

scientific article published on 19 February 2018

Antibody Suspension Bead Arrays

scientific article published on 01 January 2011

Antibody Suspension Bead Arrays within Serum Proteomics

scientific article published on 28 June 2008

Antibody performance in western blot applications is context-dependent

scientific article published on 29 January 2014

Antibody-based profiling of cerebrospinal fluid within multiple sclerosis

scientific article published on 25 June 2013

Antigen arrays for profiling autoantibody repertoires

scientific article published on 21 April 2016

Assembly of a gene sequence tag microarray by reversible biotin-streptavidin capture for transcript analysis of Arabidopsis thaliana

scientific article

Assessment of Antibody Specificity Using Suspension Bead Arrays ⬇️

scientific article published on January 1, 2011

Autoantibody profiles associated with clinical features in psychotic disorders

scientific article published on 13 September 2021

Autoantibody profiling in multiple sclerosis using arrays of human protein fragments

scientific article published on 03 June 2013

Autoantibody targets in vaccine-associated narcolepsy

scientific article published on 20 May 2016

Bead arrays for antibody and complement profiling reveal joint contribution of antibody isotypes to C3 deposition

scientific article

Biosynthesis of cellulose-enriched tension wood in Populus: global analysis of transcripts and metabolites identifies biochemical and developmental regulators in secondary wall biosynthesis

scientific article published in January 2006

CSF profiling of the human brain enriched proteome reveals associations of neuromodulin and neurogranin to Alzheimer's disease

scientific article published on 08 September 2016

Cambial meristem dormancy in trees involves extensive remodelling of the transcriptome

scientific article

Carbohydrate-active enzymes involved in the secondary cell wall biogenesis in hybrid aspen.

scientific article

Changes in gene expression in the wood-forming tissue of transgenic hybrid aspen with increased secondary growth.

scientific article published in July 2003

Circulating carnosine dipeptidase 1 associates with weight loss and poor prognosis in gastrointestinal cancer

scientific article published on 21 April 2015

Classification of protein profiles from antibody microarrays using heat and detergent treatment

scientific article published on 14 October 2011

Comparative analysis of a 3' end tag PCR and a linear RNA amplification approach for microarray analysis

scientific article published on 25 September 2006

Comparative protein profiling of serum and plasma using an antibody suspension bead array approach

scientific article published in February 2010

Comparative serum proteomic analysis of a selected protein panel in individuals with schizophrenia and bipolar disorder and the impact of genetic risk burden on serum proteomic profiles

scientific article published in 2022

Comparative transcriptomal analysis of isogenic Plasmodium falciparum clones of distinct antigenic and adhesive phenotypes.

scientific article published on 4 December 2006

Contribution of antibody-based protein profiling to the human Chromosome-centric Proteome Project (C-HPP).

scientific article published on 31 December 2012

Correlations between RNA and protein expression profiles in 23 human cell lines

scientific article

Cytogenetic and expression profiles associated with transformation to androgen-resistant prostate cancer.

scientific article

DNA microarray technique for detection and identification of seven flaviviruses pathogenic for man.

scientific article

Default Pathway of var2csa switching and translational repression in Plasmodium falciparum

scientific article

Defining the Human Brain Proteome Using Transcriptomics and Antibody-Based Profiling with a Focus on the Cerebral Cortex

scientific article published on 15 June 2015

Detection of mutations in PCR products from clinical samples by surface plasmon resonance

scientific article published in January 1997

Determination of binding specificities in highly multiplexed bead-based assays for antibody proteomics

scientific article published on 23 October 2006

Developing new methods to answer old and new questions in neurodegenerative diseases: 21(st) Workshop of the HUPO Brain Proteome Project (HBPP) 23-24 January 2014, Honolulu, Hawaii

scientific article published on 22 April 2014

Development of a coordinated allo T cell and auto B cell response against autosomal PTK2B after allogeneic hematopoietic stem cell transplantation

scientific article published on 04 October 2013

Development of parallel reaction monitoring assays for cerebrospinal fluid proteins associated with Alzheimer's disease

scientific article published on 09 March 2019

Discovery of circulating proteins associated to knee radiographic osteoarthritis

scientific article

Dual-genome primer design for construction of DNA microarrays

scientific article published on 27 August 2004

Dysregulations in circulating sphingolipids associate with disease activity indices in female patients with systemic lupus erythematosus: a cross-sectional study

scientific article published in January 2017

Effect of infliximab on mRNA expression profiles in synovial tissue of rheumatoid arthritis patients

scientific article published on January 2006

Elevated levels of FN1 and CCL2 in bronchoalveolar lavage fluid from sarcoidosis patients

scientific article published on 4 June 2016

Elevated levels of circulating CDH5 and FABP1 in association with human drug-induced liver injury

scientific article

Empirical bayes microarray ANOVA and grouping cell lines by equal expression levels

scientific article published on 18 April 2005

Engineering of Fc(1) and Fc(3) from human immunoglobulin G to analyse subclass specificity for staphylococcal protein A.

scientific article published on February 1997

Epitopes of anti-RIFIN antibodies and characterization of rif-expressing Plasmodium falciparum parasites by RNA sequencing

scientific article published on 24 February 2017

Escherichia coli single-stranded DNA-binding protein, a molecular tool for improved sequence quality in pyrosequencing

scientific article

Evaluation of Monospecific Antibodies

Evaluation of serum MMP-9 as predictive biomarker for antisense therapy in Duchenne.

scientific article published on 20 December 2017

Exploration of high-density protein microarrays for antibody validation and autoimmunity profiling.

scientific article published on 25 September 2015

Exploring autoantibody signatures in brain tissue from patients with severe mental illness

scientific article published on 18 November 2020

Exploring the foundation of genomics: a northern blot reference set for the comparative analysis of transcript profiling technologies

scientific article published on January 2004

Expression profiling of adrenocortical neoplasms suggests a molecular signature of malignancy

Expression profiling of microdissected cell populations selected from basal cells in normal epidermis and basal cell carcinoma

scientific article

F13. TOWARDS MOLECULAR INSIGHTS INTO PSYCHIATRIC DISORDERS USING AFFINITY PROTEOMICS.

scientific article

Fabrication Using Contact Spotter

scientific article published on 01 January 2009

Gene expression analysis of human epidermal keratinocytes after N-acetyl L-cysteine treatment demonstrates cell cycle arrest and increased differentiation

scientific article published on January 2005

Gene expression profiling in the chronic fatigue syndrome

article

Generating a panel of highly specific antibodies to 20 human SH2 domains by phage display

scientific article

Generation of monospecific antibodies based on affinity capture of polyclonal antibodies

scientific article published on 12 October 2011

Genital Injury Signatures and Microbiome Alterations Associated With Depot Medroxyprogesterone Acetate Usage and Intravaginal Drying Practices

scientific article

Genome wide gene amplifications and deletions in Plasmodium falciparum

scientific article published on 18 May 2007

Global analysis of mRNA stability in the archaeon Sulfolobus

scientific article published on 26 October 2006

Heat differentiated complement factor profiling

High-Density Antigen Microarrays for the Assessment of Antibody Selectivity and Off-Target Binding

scientific article published on 01 January 2018

High-Density Serum/Plasma Reverse Phase Protein Arrays.

scientific article

High-resolution mapping of linear antibody epitopes using ultrahigh-density peptide microarrays.

scientific article published on 13 September 2012

Highly multiplexed antibody suspension bead arrays for plasma protein profiling.

scientific article published in January 2013

Identification and expression analysis of genes encoding putative cellulose synthases (CesA) in the hybrid aspen, Populus tremula (L.) P. tremuloides (Michx.)

article

Identification of a Novel Autoimmune Peptide Epitope of Prostein in Prostate Cancer

scientific article published on 4 October 2016

Identification of candidate serum proteins for classifying well-differentiated small intestinal neuroendocrine tumors

scientific article

Identification of prefrontal cortex protein alterations in Alzheimer's disease.

scientific article published on 24 January 2018

Identification of the Missing Links in Prokaryotic Pentose Oxidation Pathways

scientific article published in Journal of Biological Chemistry

Immunocapture strategies in translational proteomics.

scientific article published on 11 November 2015

Improved Differential Diagnosis of Alzheimer's Disease by Integrating ELISA and Mass Spectrometry-Based Cerebrospinal Fluid Biomarkers

Improving reliability and performance of DNA microarrays

scientific article

Increased Levels of Extracellular Microvesicle Markers and Decreased Levels of Endocytic/Exocytic Proteins in the Alzheimer's Disease Brain

scientific article

Individual and stable autoantibody repertoires in healthy individuals

scientific article published on 01 February 2019

Key players in neurodegenerative disorders in focus-New insights into the proteomic profile of Alzheimer's disease, schizophrenia, ALS, and multiple sclerosis-24th HUPO BPP Workshop: September 29, 2015, Vancouver, Canada

scientific article published on 13 February 2016

Larger aggregates of mutant seipin in Celia's Encephalopathy, a new protein misfolding neurodegenerative disease.

scientific article published on 14 August 2015

Levels of human proteins in plasma associated with acute paediatric malaria

scientific article published on 15 November 2018

Longitudinal serum biomarker screening identifies malate dehydrogenase 2 as candidate prognostic biomarker for Duchenne muscular dystrophy

scientific article published on 27 December 2019

Magnetic bead assisted labeling of antibodies at nanogram scale

scientific article

Microfluidic analysis of antibody specificity in a compact disk format

scientific article

Molecular mimicry between Anoctamin 2 and Epstein-Barr virus nuclear antigen 1 associates with multiple sclerosis risk

scientific article published on 02 August 2019

Multidimensional Normalization to Minimize Plate Effects of Suspension Bead Array Data.

scientific article

Multiplexed Antigen Bead Arrays for the Assessment of Antibody Selectivity and Epitope Mapping

scientific article published on 01 January 2018

Multiplexed PrEST immunization for high-throughput affinity proteomics

scientific article

Multiplexed protein profiling by sequential affinity capture

scientific article published on 3 March 2016

Mutational scanning of PCR products by subtractive oligonucleotide hybridization analysis

scientific article published in February 1999

Neuroproteomic Profiling of Cerebrospinal Fluid (CSF) by Multiplexed Affinity Arrays

scientific article published in January 2017

Neuroproteomic profiling of human body fluids

scientific article published on 19 August 2015

Overexpression, Rapid Isolation, and Biochemical Characterization of Escherichia coli Single-Stranded DNA-Binding Protein

scholarly article by Maria Ehn et al published June 2001 in Protein Expression and Purification

Photogenerated carbohydrate microarrays.

scientific article published on January 2007

Plasma profiling reveals human fibulin-1 as candidate marker for renal impairment

scientific article

Plasma profiling reveals three proteins associated to amyotrophic lateral sclerosis.

scientific article published on 14 July 2014

Point-of-Care Approaches for Meningitis Diagnosis in a Low-Resource Setting (Southwestern Uganda): Observational Cohort Study Protocol of the "PI-POC" Trial

scientific article published on 04 November 2020

Profiles of histidine-rich glycoprotein associate with age and risk of all-cause mortality

scientific article published on 31 July 2020

Profiling post-centrifugation delay of serum and plasma with antibody bead arrays.

scientific article published on 28 April 2013

Protein profiles of CCL5, HPGDS, and NPSR1 in plasma reveal association with childhood asthma

scientific article published on 3 May 2016

Protein profiling in serum after traumatic brain injury in rats reveals potential injury markers

scientific article

Proteome-wide epitope mapping of antibodies using ultra-dense peptide arrays

scientific article

Proteomic Profiling Reveals Autoimmune Targets in Sarcoidosis

Proteomic screen reveals Fbw7 as a modulator of the NF-κB pathway.

scientific article

Proteomics. Tissue-based map of the human proteome

scientific article (publication date: 23 January 2015)

Quantitative investigation of the modular primer effect for DNA and peptide nucleic acid hexamers

scientific article published in April 1999

Real-Time Monitoring of DNA Manipulations Using Biosensor Technology

scientific article published on 01 January 1995

Recognition of Amino Acid Motifs, Rather Than Specific Proteins, by Human Plasma Cell-Derived Monoclonal Antibodies to Posttranslationally Modified Proteins in Rheumatoid Arthritis

scientific article published on 01 February 2019

Replication-biased genome organisation in the crenarchaeon Sulfolobus

scientific article

Role of Pituitary Hormones on 17 -Ethinylestradiol-Induced Cholestasis in Rat

scientific article published on 15 November 2006

SARS-CoV-2 exposure, symptoms and seroprevalence in healthcare workers in Sweden

scientific article published on 08 October 2020

SNP analysis by allele-specific extension in a micromachined filter chamber

scientific article published on 01 April 2002

SURGE complex of Plasmodium falciparum in the rhoptry-neck (SURFIN4.2-RON4-GLURP) contributes to merozoite invasion ⬇️

scientific article published in PLoS ONE

Screening and Validation of Novel Biomarkers in Osteoarticular Pathologies by Comprehensive Combination of Protein Array Technologies.

scientific article published on 5 April 2017

Screening for C3 deficiency in newborns using microarrays.

scientific article

Selective IgA deficiency in early life: Association to infections and allergic diseases during childhood

article

Selectivity analysis of single binder assays used in plasma protein profiling

scientific article published on 18 November 2013

Serum Autoantibody Profiling of Patients with Paraneoplastic and Non-Paraneoplastic Autoimmune Retinopathy.

scientific article

Serum microarrays for large scale screening of protein levels.

scientific article published on 29 August 2005

Single-nucleotide polymorphism analysis by allele-specific extension of fluorescently labeled nucleotides in a microfluidic flow-through device

article

Structural Basis of Cross-Reactivity of Anti-Citrullinated Protein Antibodies

scientific article published on 04 January 2019

Systematic antibody and antigen-based proteomic profiling with microarrays

scientific article published on March 2011

Systematic evaluation of SARS-CoV-2 antigens enables a highly specific and sensitive multiplex serological COVID-19 assay

scientific article published on 19 July 2021

The antimicrobial protein S100A12 identified as a potential autoantigen in a subgroup of atopic dermatitis patients

scientific article published on 31 January 2019

The genetics and genomics of the drought response in Populus

scientific article

The human secretome

scientific article published on 26 November 2019

Three replication origins in Sulfolobus species: synchronous initiation of chromosome replication and asynchronous termination

scientific article

Toward next generation plasma profiling via heat-induced epitope retrieval and array-based assays

scientific article

Towards a human proteome atlas: High-throughput generation of mono-specific antibodies for tissue profiling

scholarly article by Peter Nilsson published in October 2005

Towards encoded particles for highly multiplexed colorimetric point of care autoantibody detection

scientific article published on 19 January 2017

Towards proteome scale antibody selections using phage display

scientific article

Transcriptional profiling enables molecular classification of adrenocortical tumours.

scientific article published in May 2009

UPSC-BASE -Populustranscriptomics online

scientific article published in 2006

Validation of affinity reagents using antigen microarrays

scientific article published on 23 November 2011

Validation of serum protein profiles by a dual antibody array approach

scientific article published on 23 September 2009

Variability in synovial inflammation in rheumatoid arthritis investigated by microarray technology

scientific article

Variance decomposition of protein profiles from antibody arrays using a longitudinal twin model.

scientific article published on 17 November 2011

Whole-Proteome Peptide Microarrays for Profiling Autoantibody Repertoires within Multiple Sclerosis and Narcolepsy.

scientific article published on 25 January 2017

cDNA microarray analysis of small plant tissue samples using a cDNA tag target amplification protocol

article

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