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List of works by Marcel W Coolen

Analysis of three Ptx2 splice variants on transcriptional activity and differential expression pattern in the brain

scientific journal article

Bisulfite sequencing of chromatin immunoprecipitated DNA (BisChIP-seq) directly informs methylation status of histone-modified DNA

scientific article

Comparison of methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal CpG sequence coverage bias

scientific article published on January 2011

Consolidation of the cancer genome into domains of repressive chromatin by long-range epigenetic silencing (LRES) reduces transcriptional plasticity

scientific article

Correlates of Antiviral Immune Restoration in Acute and Chronic HIV Type 1 Infection: Sustained Viral Suppression and Normalization of T Cell Subsets

article

Demonstration of postsynaptic receptor plasticity in an amphibian neuroendocrine interface

scientific article published in November 2002

Dietary methyl donor deficiency during pregnancy in rats shapes learning and anxiety in offspring

scientific article published in October 2011

Differential contribution of the three Aph1 genes to gamma-secretase activity in vivo

scientific article

Dynamics of bivalent chromatin domains upon drug induced reactivation and resilencing in cancer cells

scientific article published in September 2011

Epigenetic deregulation across chromosome 2q14.2 differentiates normal from prostate cancer and provides a regional panel of novel DNA methylation cancer biomarkers.

scientific article

Evaluation of affinity-based genome-wide DNA methylation data: effects of CpG density, amplification bias, and copy number variation

scientific article

Evidence that brain-derived neurotrophic factor acts as an autocrine factor on pituitary melanotrope cells of Xenopus laevis

scientific article published in April 2002

GWAS of DNA methylation variation within imprinting control regions suggests parent-of-origin association

scientific article published on 3 June 2013

Gene dosage effect on gamma-secretase component Aph-1b in a rat model for neurodevelopmental disorders

scientific article

Genomic profiling of CpG methylation and allelic specificity using quantitative high-throughput mass spectrometry: critical evaluation and improvements

scientific article

HLA and other host factors in transfusion-acquired HIV-1 infection

article

Impact of the genome on the epigenome is manifested in DNA methylation patterns of imprinted regions in monozygotic and dizygotic twins

scientific article

Ontogenic reduction of Aph-1b mRNA and gamma-secretase activity in rats with a complex neurodevelopmental phenotype

scientific article published on 23 May 2006

Reduced Aph-1b expression causes tissue- and substrate-specific changes in gamma-secretase activity in rats with a complex phenotype

scientific article

Regional activation of the cancer genome by long-range epigenetic remodeling

scientific article published on 13 December 2012

Regulatory Roles for Long ncRNA and mRNA

scientific article published on 26 April 2013

Repitools: an R package for the analysis of enrichment-based epigenomic data

scientific article

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