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List of works by Clive M. Gray

A combination of baseline plasma immune markers can predict therapeutic response in multidrug resistant tuberculosis

scientific article

A dead-end host: is there a way out? A position piece on the ebola virus outbreak by the international union of immunology societies.

scientific article

A high viral burden predicts the loss of CD8 T-cell responses specific for subdominant gag epitopes during chronic human immunodeficiency virus infection

scientific article

A prime-boost immunisation regimen using recombinant BCG and Pr55(gag) virus-like particle vaccines based on HIV type 1 subtype C successfully elicits Gag-specific responses in baboons

scientific article published on 9 June 2009

A steady state of CD4+ T cell memory maturation and activation is established during primary subtype C HIV-1 infection

scientific article published on 2 April 2010

A subset of circulating blood mycobacteria-specific CD4 T cells can predict the time to Mycobacterium tuberculosis sputum culture conversion

scientific article (publication date: 2014)

AIDS-related mycoses: the way forward

scientific article

Adaptive changes in HIV-1 subtype C proteins during early infection are driven by changes in HLA-associated immune pressure.

scientific article

Afri-Can Forum 2 : Johannesburg, South Africa. 16-18 February 2015

Age, absolute CD4 count, and CD4 percentage in relation to HPV infection and the stage of cervical disease in HIV-1-positive women

scientific article published on 01 February 2020

An IRF1-IRF4 Toggle-Switch Controls Tolerogenic and Immunogenic Transcriptional Programming in Human Langerhans Cells

scientific article

Antigen-specific T-cell-mediated immunity after HIV-1 infection: implications for vaccine control of HIV development

scientific article published on August 2006

Association of HIV-specific and total CD8+ T memory phenotypes in subtype C HIV-1 infection with viral set point

scientific article published on April 2009

Bacille Calmette-Guérin Vaccine Strain Modulates the Ontogeny of Both Mycobacterial-Specific and Heterologous T Cell Immunity to Vaccination in Infants

scientific article published on 01 October 2019

Breastfeeding mitigates the effects of maternal HIV on infant infectious morbidity in the Option B+ era

article

Broad, high-magnitude and multifunctional CD4+ and CD8+ T-cell responses elicited by a DNA and modified vaccinia Ankara vaccine containing human immunodeficiency virus type 1 subtype C genes in baboons

scientific article published in February 2009

CTL response to HIV type 1 subtype C is poorly predicted by known epitope motifs

scientific article published in August 2007

Cellular immunity in HIV: a synthesis of responses to preserve self

article

Characterization of the novel HLA-DQB1*05:272 allele in a South African patient by next generation sequencing

scientific article published on 21 November 2020

Combined HIV Adolescent Prevention Study (CHAPS): comparison of HIV pre-exposure prophylaxis regimens for adolescents in sub-Saharan Africa-study protocol for a mixed-methods study including a randomised controlled trial

scientific article published on 30 October 2020

Conserved domains of subtype C nef from South African HIV type 1-infected individuals include cytotoxic T lymphocyte epitope-rich regions

scientific article

Converging epidemics of sexually transmitted infections and bacterial vaginosis in southern African female adolescents at risk of HIV.

scientific article

DNA-MVA-protein vaccination of rhesus macaques induces HIV-specific immunity in mucosal-associated lymph nodes and functional antibodies

scientific article published on 06 January 2017

Data Availability of Open T-Cell Receptor Repertoire Data, a Systematic Assessment

scientific article published on 06 June 2022

Delayed BCG vaccination results in minimal alterations in T cell immunogenicity of acellular pertussis and tetanus immunizations in HIV-exposed infants

scientific article

Delaying BCG vaccination until 8 weeks of age results in robust BCG-specific T-cell responses in HIV-exposed infants

scientific article

Differential impact of magnitude, polyfunctional capacity, and specificity of HIV-specific CD8+ T cell responses on HIV set point

scientific article

Distinct kinetics of Gag-specific CD4+ and CD8+ T cell responses during acute HIV-1 infection

scientific article published on 27 January 2012

Diversity in immunogenomics: the value and the challenge

scientific article

Does HIV Exploit the Inflammatory Milieu of the Male Genital Tract for Successful Infection?

scientific article

Dynamic HIV/AIDS parameter estimation with application to a vaccine readiness study in southern Africa

scientific article published in May 2005

Early evolution of human leucocyte antigen-associated escape mutations in variable Gag proteins predicts CD4+ decline in HIV-1 subtype C-infected women

scientific article

Effect of standard tuberculosis treatment on plasma cytokine levels in patients with active pulmonary tuberculosis

scientific article (publication date: 2012)

Enrolling adolescents in research on HIV and other sensitive issues: lessons from South Africa

scientific article

Establishing a cohort at high risk of HIV infection in South Africa: challenges and experiences of the CAPRISA 002 acute infection study

scientific article

European Union and EDCTP strategy in the global context: Recommendations for preventive HIV/AIDS vaccines research

article

Expansion of monocyte-like cells expressing natural killer cell-associated antigens in response to low-dose total lymphoid irradiation

scientific article published on 01 November 1995

FOXP3 expression is upregulated in CD4T cells in progressive HIV-1 infection and is a marker of disease severity

scientific article

Fluidity of HIV-1-specific T-cell responses during acute and early subtype C HIV-1 infection and associations with early disease progression

scientific article

Frequencies of immune hypersensitivity reaction-associated HLA class I alleles in healthy South African Indian and mixed ancestry populations determined by a novel real-time PCR assay.

scientific article published on 25 August 2014

Frequency of Circulating CD4Ki67HLA-DR T Regulatory Cells Prior to Treatment for Multidrug Resistant Tuberculosis Can Differentiate the Severity of Disease and Predict Time to Culture Conversion

article

Genetic characteristics of HIV-1 subtype C envelopes inducing cross-neutralizing antibodies

scientific article published on 16 July 2007

HIV disease progression in seroconvertors from the CAPRISA 004 tenofovir gel pre-exposure prophylaxis trial

scientific article

HIV type 1 subtype C gag and nef diversity in Southern Africa

scientific article published in March 2007

HIV-1 subtype C Pr55gag virus-like particle vaccine efficiently boosts baboons primed with a matched DNA vaccine

scientific article published in September 2008

HLA typing: Conventional techniques v. next-generation sequencing.

scientific article published on 16 December 2015

Heterologous vaccination against human tuberculosis modulates antigen-specific CD4+ T-cell function

scientific article published on 08 July 2013

Hierarchical targeting of subtype C human immunodeficiency virus type 1 proteins by CD8+ T cells: correlation with viral load

scientific article published on April 2004

Highly active antiretroviral therapy results in HIV type 1 suppression in lymph nodes, increased pools of naive T cells, decreased pools of activated T cells, and diminished frequencies of peripheral activated HIV type 1-specific CD8+ T cells

scientific article published in September 2000

Human Leukocyte Antigen (HLA) Class II -DRB1 and -DQB1 Alleles and the Association with Cervical Cancer in HIV/HPV Co-Infected Women in South Africa

scientific article published on 20 May 2019

Human immunodeficiency virus-specific gamma interferon enzyme-linked immunospot assay responses targeting specific regions of the proteome during primary subtype C infection are poor predictors of the course of viremia and set point

scientific article published on 22 October 2008

Human leukocyte antigen class I (A, B, C) and II (DRB1) diversity in the black and Caucasian South African population

scientific article published on 23 October 2011

Identification of non-T suppressor cells with possible contra-interleukin-2 properties in non-human primates tolerant to their renal allograft.

scientific article

Immuno-informatics design of a multimeric epitope peptide based vaccine targeting SARS-CoV-2 spike glycoprotein

scientific article published on 17 March 2021

Immunology Education Without Borders

scientific article published on 28 August 2019

Immunology as a medical discipline in South Africa: Why, how and what form?

scholarly article published 8 October 2014

Immunology as a medical discipline in South Africa: why, how and what form?

scientific article published in November 2014

Impact of chemokine C-C ligand 27, foreskin anatomy and sexually transmitted infections on HIV-1 target cell availability in adolescent South African males

scientific article published on 16 October 2019

Impact of maternal HIV exposure, feeding status, and microbiome on infant cellular immunity

scientific article published on 21 December 2018

Impact of mucosal inflammation on cervical human immunodeficiency virus (HIV-1)-specific CD8 T-cell responses in the female genital tract during chronic HIV infection

scientific article published on 18 June 2008

In a mixed subtype epidemic, the HIV-1 Gag-specific T-cell response is biased towards the infecting subtype

scientific article

In-utero exposure to maternal HIV infection alters T-cell immune responses to vaccination in HIV-uninfected infants

scientific article

Incidence of HIV‐1 Dual Infection and Its Association with Increased Viral Load Set Point in a Cohort of HIV‐1 Subtype C–Infected Female Sex Workers

article

Increased memory differentiation is associated with decreased polyfunctionality for HIV but not for cytomegalovirus-specific CD8+ T cells

scientific article

Intersubtype differences in the effect of a rare p24 gag mutation on HIV-1 replicative fitness

scientific article

Intra- and inter-clade cross-reactivity by HIV-1 Gag specific T-cells reveals exclusive and commonly targeted regions: implications for current vaccine trials

scientific article

Investigation of Cervical Tumor Biopsies for Chromosomal Loss of Heterozygosity (LOH) and Microsatellite Instability (MSI) at the HLA II Locus in HIV-1/HPV Co-infected Women

scientific article published on 15 October 2019

Is obesity a risk factor for vaccine non-responsiveness?

scientific article

Killer-cell Immunoglobulin-like Receptor (KIR) gene profiles modify HIV disease course, not HIV acquisition in South African women.

scientific article published on 25 January 2016

Laboratory expansion to large-scale international HIV preventive vaccine trials

scientific article published on May 2007

Maternal T Cells in the Human Placental Villi Support an Allograft Response during Noninfectious Villitis

scientific article published on 22 April 2020

Metabolic Syndrome After HIV Acquisition in South African Women.

scientific article

Novel and promiscuous CTL epitopes in conserved regions of Gag targeted by individuals with early subtype C HIV type 1 infection from southern Africa

scientific article published on October 2004

Passively transmitted gp41 antibodies in babies born from HIV-1 subtype C-seropositive women: correlation between fine specificity and protection.

scientific article published in February 2012

Peptide impurities in commercial synthetic peptides and their implications for vaccine trial assessment

scientific article

Plasma interferon-gamma-inducible protein 10 can be used to predict viral load in HIV-1-infected individuals

scientific article published on July 2013

Rapid disease progression in HIV-1 subtype C-infected South African women

scientific article

Rapid, complex adaptation of transmitted HIV-1 full-length genomes in subtype C-infected individuals with differing disease progression

scientific article published on February 2013

Relationship between functional profile of HIV-1 specific CD8 T cells and epitope variability with the selection of escape mutants in acute HIV-1 infection

scientific article

Role of semen in altering the balance between inflammation and tolerance in the female genital tract: does it contribute to HIV risk?

scientific article published on 12 May 2014

S03-05 OA. A less differentiated memory phenotype of Gag-specific CD4+ T-cells during primary HIV infection associates with viral control at 12 months.

scientific article published on 22 October 2009

SPORE series winner. Immunology for clinicians: a "Trojan Horse" approach

scientific article

Standardization of cytokine flow cytometry assays

scientific article

Teaching advanced flow cytometry in Africa: 10 years of lessons learned

scientific article

Temporal association of HLA-B*81:01- and HLA-B*39:10-mediated HIV-1 p24 sequence evolution with disease progression.

scientific article

The Center for HIV/AIDS Vaccine Immunology (CHAVI) multi-site quality assurance program for cryopreserved human peripheral blood mononuclear cells

scientific article

The ELISPOT assay: an easily transferable method for measuring cellular responses and identifying T cell epitopes

scientific article

The Elusive Role of Placental Macrophages: The Hofbauer Cell

scientific article published on 10 April 2019

The Immune Response to HIV

article

The PTAP sequence duplication in HIV-1 subtype C Gag p6 in drug-naive subjects of India and South Africa

scientific article

The immune response to HIV

article

Transmission of HIV-1 CTL escape variants provides HLA-mismatched recipients with a survival advantage

scientific article

Turning Discoveries into Treatments: Immunology in Africa

scientific article published on 04 November 2020

Vertical T cell immunodominance and epitope entropy determine HIV-1 escape

scientific article

Viral dynamics and CD4+ T cell counts in subtype C human immunodeficiency virus type 1-infected individuals from southern Africa

scientific article published in April 2005

Virological and immunological factors associated with HIV-1 differential disease progression in HLA-B 58:01-positive individuals

scientific article

crAssphage genomes identified in fecal samples of an adult and infants with evidence of positive genomic selective pressure within tail protein genes

scientific article published on 30 October 2020

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