List of works - Jun Fan

A critical appraisal of techniques, software packages, and standards for quantitative proteomic analysis

scientific article published on 17 July 2012

A tutorial for software development in quantitative proteomics using PSI standard formats

scientific article

Computational approaches to selected reaction monitoring assay design.

scientific article published in January 2013

De novo derivation of proteomes from transcriptomes for transcript and protein identification

scientific article published on 11 November 2012

Evidence of recombination between divergent hepatitis E viruses

scientific article

FAANG, establishing metadata standards, validation and best practices for the farmed and companion animal community

scientific article published on 12 October 2018

Galaxy Integrated Omics: Web-based Standards-Compliant Workflows for Proteomics Informed by Transcriptomics.

scientific article published on 12 August 2015

Identifying the important HIV-1 recombination breakpoints.

scientific article

MRMaid 2.0: mining PRIDE for evidence-based SRM transitions

scientific article

MRMaid: The SRM Assay Design Tool for Arabidopsis and Other Species.

scientific article

Proteomics informed by transcriptomics for characterising active transposable elements and genome annotation in Aedes aegypti.

scientific article

Sequence determinants of breakpoint location during HIV-1 intersubtype recombination.

scientific article published on 26 September 2006

The European Nucleotide Archive in 2019

scientific article published on 01 January 2020

The distribution of HIV-1 recombination breakpoints

scientific article published on 28 July 2007

The mzQuantML data standard for mass spectrometry-based quantitative studies in proteomics

scientific article (publication date: August 2013)

The mzTab data exchange format: communicating mass-spectrometry-based proteomics and metabolomics experimental results to a wider audience

scientific article

The mzqLibrary--An open source Java library supporting the HUPO-PSI quantitative proteomics standard.

scientific article published on 2 June 2015

UniProt and Mass Spectrometry-Based Proteomics—A 2-Way Working Relationship

scientific article published in August 2023

List of works by Jun Fan

A critical appraisal of techniques, software packages, and standards for quantitative proteomic analysis

A tutorial for software development in quantitative proteomics using PSI standard formats

Computational approaches to selected reaction monitoring assay design.

De novo derivation of proteomes from transcriptomes for transcript and protein identification

Evidence of recombination between divergent hepatitis E viruses

FAANG, establishing metadata standards, validation and best practices for the farmed and companion animal community

Galaxy Integrated Omics: Web-based Standards-Compliant Workflows for Proteomics Informed by Transcriptomics.

Identifying the important HIV-1 recombination breakpoints.

MRMaid 2.0: mining PRIDE for evidence-based SRM transitions

MRMaid: The SRM Assay Design Tool for Arabidopsis and Other Species.

Proteomics informed by transcriptomics for characterising active transposable elements and genome annotation in Aedes aegypti.

Sequence determinants of breakpoint location during HIV-1 intersubtype recombination.

The European Nucleotide Archive in 2019

The distribution of HIV-1 recombination breakpoints

The mzQuantML data standard for mass spectrometry-based quantitative studies in proteomics

The mzTab data exchange format: communicating mass-spectrometry-based proteomics and metabolomics experimental results to a wider audience

The mzqLibrary--An open source Java library supporting the HUPO-PSI quantitative proteomics standard.

UniProt and Mass Spectrometry-Based Proteomics—A 2-Way Working Relationship

UniProt and Mass Spectrometry-Based Proteomics—A 2-Way Working Relationship