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List of works by Jun Gong

"Candidatus Sonnebornia yantaiensis", a member of candidate division OD1, as intracellular bacteria of the ciliated protist Paramecium bursaria (Ciliophora, Oligohymenophorea).

scientific article

A meta-analysis of the publicly available bacterial and archaeal sequence diversity in saline soils

scientific article published on June 12, 2013

A new investigation of the marine ciliate, Trachelostyla pediculiformis (Cohn, 1866) Borror, 1972 (Ciliophora, Hypotrichida), with establishment of a new genus, Spirotrachelostyla nov. gen.

scientific article

A new marine ciliate, Tachysoma multinucleata sp. nov. (Ciliophora: Oxytrichidae)

scholarly article in Journal of the Marine Biological Association of the United Kingdom, vol. 87 no. 5, October 2007

Acrylate protects a marine bacterium from grazing by a ciliate predator

scientific article published in 2021

An updated phylogeny of oligotrich and choreotrich ciliates (Protozoa, Ciliophora, Spirotrichea) with representative taxa collected from Chinese coastal waters

article

Anaerobic ammonium oxidation (anammox) bacterial diversity, abundance, and activity in marsh sediments of the Yangtze Estuary

Antibacterial activity of lyase-depolymerized products of alginate

Beyond the "Code": A Guide to the Description and Documentation of Biodiversity in Ciliated Protists (Alveolata, Ciliophora).

scientific article

Biochar addition affected the dynamics of ammonia oxidizers and nitrification in microcosms of a coastal alkaline soil

article

Ciliates — Protists with complex morphologies and ambiguous early fossil record

scholarly article by Micah Dunthorn published in September 2015

Community Structure and Abundance of Archaea in a Zostera marina Meadow: A Comparison between Seagrass-Colonized and Bare Sediment Sites

scientific article published on 18 November 2019

Comparative Transcriptomics Reveals Distinct Gene Expressions of a Model Ciliated Protozoa Feeding on Bacteria-Free Medium, Digestible, and Digestion-Resistant Bacteria

scientific article published on 13 April 2020

Contrasting spatiotemporal patterns and environmental drivers of diversity and community structure of ammonia oxidizers, denitrifiers, and anammox bacteria in sediments of estuarine tidal flats

Coupling between Ribotypic and Phenotypic Traits of Protists across Life Cycle Stages and Temperatures

scientific article published on 24 November 2021

Depth shapes α- and β-diversities of microbial eukaryotes in surficial sediments of coastal ecosystems.

scientific article published on 11 January 2015

Description of a new marine cyrtophorid ciliate, Dysteria derouxi nov. spec., with an updated key to 12 well-investigated Dysteria species (Ciliophora, Cyrtophorida)

article

Development and evaluation of specific PCR primers targeting the ribosomal DNA-internal transcribed spacer (ITS) region of peritrich ciliates in environmental samples

scholarly article

Developmentally Utilizing Molecular Biological Techniques into Aquaculture

Differential effects of abiotic factors and host plant traits on diversity and community composition of root-colonizing arbuscular mycorrhizal fungi in a salt-stressed ecosystem

scientific article

Distinct seasonality of chytrid-dominated benthic fungal communities in the neritic oceans (Bohai Sea and North Yellow Sea)

article by Yaping Wang et al published December 2017 in Fungal Ecology

Dynamics and Distribution of Marine Synechococcus Abundance and Genotypes during Seasonal Hypoxia in a Coastal Marine Ranch

Effects of temperature on non-specific immune parameters in two scallop species: Argopecten irradians (Lamarck 1819) and Chlamys farreri (Jones & Preston 1904)

Environmental Factors and Pollution Stresses Select Bacterial Populations in Association With Protists

Extremely high copy numbers and polymorphisms of the rDNA operon estimated from single cell analysis of oligotrich and peritrich ciliates.

scientific article published on 24 January 2013

Further insights into the phylogeny of two ciliate classes Nassophorea and Prostomatea (Protista, Ciliophora).

scientific article

Genetic Diversity of Benthic Microbial Eukaryotes in Response to Spatial Heterogeneity of Sediment Geochemistry in a Mangrove Ecosystem

scholarly article by Ping Zhu et al published 15 September 2017 in Estuaries and Coasts

Incorporation of Microbial Functional Traits in Biogeochemistry Models Provides Better Estimations of Benthic Denitrification and Anammox Rates in Coastal Oceans

scientific article published on 30 August 2018

Intertidal zonation affects diversity and functional potentials of bacteria in surface sediments: A case study of the Golden Bay mangrove, China

scientific article published in 2018

Macroalgal blooms favor heterotrophic diazotrophic bacteria in nitrogen-rich and phosphorus-limited coastal surface waters in the Yellow Sea

scholarly article by Xiaoli Zhang published in September 2015

Marine fungal communities in water and surface sediment of a sea cucumber farming system: habitat-differentiated distribution and nutrients driving succession

scientific article published in 2015

Membrane inlet mass spectrometry method (REOX/MIMS) to measure 15N-nitrate in isotope-enrichment experiments

scientific article published in 2021

Microscopical observations on four marine Dysteria species (Ciliophora, Cyrtophorida)

scientific article published on 03 May 2007

Molecular Detection of Eukaryotic Diets and Gut Mycobiomes in Two Marine Sediment-Dwelling Worms, Sipunculus nudus and Urechis unicinctus

scholarly article by Yaping Wang et al published 29 September 2018 in Microbes and environments / JSME

Molecular diversity and biogeography of benthic ciliates in the Bohai Sea and Yellow Sea

Molecular phylogeny and species separation of five morphologically similar Holosticha-complex ciliates (Protozoa, Ciliophora) using ARDRA riboprinting and multigene sequence data

scholarly article by Feng Gao et al published May 2010 in Chinese journal of oceanology and limnology

Molecular phylogeny of oligotrich genera Omegastrombidium and Novistrombidium (Protozoa, Ciliophora) for the systematical relationships within Family Strombidiidae

scholarly article by Qianqian Zhang et al published 29 June 2010 in Chinese journal of oceanology and limnology

Morphogenesis of the marine ciliate, Pseudoamphisiella alveolata (Kahl, 1932) Song & Warren, 2000 (Ciliophora, Stichotrichia, Urostylida) during binary fission

scientific article

Morphogenesis of the marine spirotrichous ciliate, Trachelostyla pediculiformis (Cohn, 1866) (Ciliophora, Stichotrichia), with consideration of its phylogenetic position

scientific article published on 17 September 2007

Morphological Redescription and Neotypification of the Marine Ciliate, Amphisiella marioni (Ciliophora: Hypotrichida), a Poorly Known Form Misidentified for a Long Time

scientific article published on 01 July 2007

Morphological descriptions of new and little-known benthic ciliates from Ganghwa tidal flat, Korea

scientific article

Morphological redescriptions of four marine ciliates (Ciliophora: Cyrtophorida: Dysteriidae) from Qingdao, China

scientific article

Morphology and Phylogeny of the Soil Ciliate Metopus yantaiensis n. sp. (Ciliophora, Metopida), with Identification of the Intracellular Bacteria.

scientific article

Morphology and infraciliature of two marine species of Hartmannula (Protozoa, Ciliophora, Cyrtophorida), from scallop-farming waters off Qingdao (Tsingtao), China

article

Morphology and infraciliature of two new marine ciliates, Paracyrtophoron tropicum nov. gen., nov. spec. and Aegyria rostellum nov. spec. (Ciliophora, Cyrtophorida), isolated from tropical waters in southern China.

scientific article

Morphology and morphogenesis of a new marine cyrtophorid ciliate, Hartmannula sinica nov. spec. (Protozoa, Ciliophora, Cyrtophorida) from China

scientific article

Morphology, morphogenesis, and molecular phylogeny of a new marine urostylid ciliate (Ciliophora, Stichotrichia) from the South China Sea, and a brief overview of the convergent evolution of the midventral pattern within the Spirotrichea

article

New Intranuclear Symbiotic Bacteria from Macronucleus of Paramecium putrinum—“Candidatus Gortzia Yakutica”

Novistrombidium sinicum n. sp. and Novistrombidium orientale n. sp. (Protozoa: Ciliophora): Two new oligotrich ciliates from a Mangrove Wetland, South China.

scientific article published in September 2009

Parabirojimia multinucleata spec. nov. and Anteholosticha scutellum (Cohn, 1866) Berger, 2003, marine ciliates (Ciliophora, Hypotrichida) from tropical waters in southern China, with notes on their small-subunit rRNA gene sequences.

scientific article

Phylogenetic analyses suggest thatPsammomitra(Ciliophora, Urostylida) should represent an urostylid family, based on small subunit rRNA and alpha-tubulin gene sequence information

article

Phylogenetic investigation on five genera of tintinnid ciliates (Ciliophora, Choreotrichia), based on the small subunit ribosomal RNA gene sequences

article

Phylogeny of six oligohymenophoreans (Protozoa, Ciliophora) inferred from small subunit rRNA gene sequences

article

Planktonic protist communities in a semi-enclosed mariculture pond: structural variation and correlation with environmental conditions

scholarly article in Journal of the Marine Biological Association of the United Kingdom, vol. 88 no. 7, July 2008

Potentiometric aptasensing of Listeria monocytogenes using protamine as an indicator

scientific article published on 24 September 2014

Protist-Bacteria Associations: Gammaproteobacteria and Alphaproteobacteria Are Prevalent as Digestion-Resistant Bacteria in Ciliated Protozoa.

scientific article

Re-establishment of the cyrtophorid genus Coeloperix Deroux, nov. gen., with a description of Coeloperix sleighi nov. spec. (Protozoa, Ciliophora, Cyrtophorida)

Reconstructed metagenomes reveal changes of microbial functional profiling during PAHs degradation along a rice (Oryza sativa) rhizosphere gradient

scientific article published on 4 February 2015

Redescription of Favella ehrenbergii (Claparède and Lachmann, 1858) Jörgensen, 1924 (Ciliophora: Choreotrichia), with phylogenetic analyses based on small subunit rRNA gene sequences

scientific article published on 15 September 2010

Relative Abundance of Ammonia Oxidizers, Denitrifiers, and Anammox Bacteria in Sediments of Hyper-Nutrified Estuarine Tidal Flats and in Relation to Environmental Conditions

Revealing the diversity and quantity of peritrich ciliates in environmental samples using specific primer-based PCR and quantitative PCR.

scientific article

SSU rDNA sequence diversity and seasonally differentiated distribution of nanoplanktonic ciliates in neritic Bohai and Yellow Seas as revealed by T-RFLP

scientific article

Seagrass (Zostera marina) Colonization Promotes the Accumulation of Diazotrophic Bacteria and Alters the Relative Abundances of Specific Bacterial Lineages Involved in Benthic Carbon and Sulfur Cycling.

scientific article published on 24 July 2015

Seagrass (Zostera marina) promotes nitrification potential and selects specific ammonia oxidizers in coastal sediments

Shifts in diversity and community structure of endophytic bacteria and archaea across root, stem and leaf tissues in the common reed, Phragmites australis, along a salinity gradient in a marine tidal wetland of northern China.

scientific article

Single Cell Analysis Linking Ribosomal (r)DNA and rRNA Copy Numbers to Cell Size and Growth Rate Provides Insights into Molecular Protistan Ecology.

scientific article published on 12 May 2017

Small subunit rRNA phylogenies show that the class nassophorea is not monophyletic (Phylum Ciliophora).

scientific article published in July 2009

Spatial shifts in size structure, phylogenetic diversity, community composition and abundance of small eukaryotic plankton in a coastal upwelling area of the northern South China Sea

Taxonomic Diversity of Pico-/Nanoeukaryotes Is Related to Dissolved Oxygen and Productivity, but Functional Composition Is Shaped by Limiting Nutrients in Eutrophic Coastal Oceans

scientific article published on 03 December 2020

Taxonomic studies on three marine pleurostomatid ciliates, Litonotus bergeri nov. spec., L. blattereri nov. spec. and L. petzi nov. spec. (Ciliophora, Pleurostomatida) from North China Sea.

scientific article

Taxonomy of five species of cyrtophorids (Protozoa: Ciliophora) including consideration of the phylogeny of two new genera

scholarly article by HONGBO PAN et al published January 2012 in Zoological Journal of the Linnean Society

The All-Data-Based Evolutionary Hypothesis of Ciliated Protists with a Revised Classification of the Phylum Ciliophora (Eukaryota, Alveolata)

scientific article (publication date: 29 April 2016)

The differentiation of iron-reducing bacterial community and iron-reduction activity between riverine and marine sediments in the Yellow River estuary

The morphology and morphogenesis of a marine ciliate, Epiclintes auricularis rarisetus nov. sspec. (Ciliophora, Epiclintidae), from the Yellow Sea.

scientific article published on 5 April 2009

Three marine haptorid ciliates from northern China:Paraspathidium apofuscumn. sp.,Trachelotractus entzi(Kahl, 1927) Foissner, 1997 andApotrachelotractus variabialisLong, Song and Warren, 2009 (Protozoa, Ciliophora)

article by Hongan Long et al published 21 July 2009 in Journal of Natural History

Three rDNA Loci-Based Phylogenies of Tintinnid Ciliates (Ciliophora, Spirotrichea, Choreotrichida).

scientific article published on 10 August 2016

Trichopodiella faurei n. sp. (Ciliophora, Phyllopharyngea, Cyrtophoria): morphological description and phylogenetic analyses based on SSU rRNA and group I intron sequences.

scientific article

Updating Biodiversity Studies in Loricate Protists: The Case of the Tintinnids (Alveolata, Ciliophora, Spirotrichea).

scientific article published on 10 February 2016

Variations and evolution of polyubiquitin genes from ciliates

scientific article published on 9 June 2012