List of works - Sean R. Connolly

A Latitudinal Gradient In The Structure Of Rocky Intertidal Communities : Benthic-oceanic Coupling In The Northeast Pacific Ocean ⬇️

1999 thesis (Ph.D.) submitted to Stanford University by Sean Connolly

A Trait-Based Approach to Advance Coral Reef Science

scientific article

A critique of claims for negative impacts of Marine Protected Areas on fisheries

scientific article published in March 2016

A latitudinal gradient in northeast Pacific intertidal community structure: evidence for an oceanographically based synthesis of marine community theory

scientific article published in April 1998

A test of trophic cascade theory: fish and benthic assemblages across a predator density gradient on coral reefs.

scientific article published on 15 October 2016

A unified model explains commonness and rarity on coral reefs

scientific article published on 2 March 2017

Aggression, interference, and the functional response of coral-feeding butterflyfishes

scientific article published in July 2017

Allometric growth in reef-building corals.

scientific article published in March 2017

An Indo-Pacific coral spawning database

scientific article published on 29 January 2021

An experimentally validated nitrate–ammonium–phytoplankton model including effects of starvation length and ammonium inhibition on nitrate uptake

scholarly article by Martino E. Malerba et al published December 2015 in Ecological Modelling

Author Correction: The population sizes and global extinction risk of reef-building coral species at biogeographic scales

correction of a scholarly article

Biodiversity hotspots, centres of endemicity, and the conservation of coral reefs

scientific article published in 2002

Biogeography and the structure of coral reef fish communities on isolated islands

scholarly article by Jean-Paul A. Hobbs et al published 8 August 2011 in Journal of Biogeography

Calcification, Storm Damage and Population Resilience of Tabular Corals under Climate Change ⬇️

scientific article published on October 4, 2012

Climate-mediated mechanical changes to post-disturbance coral assemblages

scientific article

Commonness and rarity in the marine biosphere

scientific article

Community structure of corals and reef fishes at multiple scales

scientific article published in August 2005

Comparative analysis of energy allocation to tissue and skeletal growth in corals

scientific article published on 30 June 2010

Connectivity, regime shifts and the resilience of coral reefs

Coral adaptation to climate change: Meta‐analysis reveals high heritability across multiple traits

scientific article published on 05 September 2021

Coral reef diversity refutes the neutral theory of biodiversity

scientific article published in March 2006

Coral reef diversity refutes the neutral theory of biodiversity

scientific article published in Nature

Coral transplantation triggers shift in microbiome and promotion of coral disease associated potential pathogens

scientific article published on 6 July 2015

Corrigendum: The Coral Trait Database, a curated database of trait information for coral species from the global oceans

scientific article

Defining fundamental niche dimensions of corals: synergistic effects of colony size, light, and flow

scientific article published in March 2009

Dispersal-mediated coexistence under recruitment limitation and displacement competition

scientific article

Diversity and stability of herbivorous fishes on coral reefs.

scientific article

Double jeopardy and global extinction risk in corals and reef fishes.

scientific article

Ecological consequences of major hydrodynamic disturbances on coral reefs

scientific article published in November 2006

Ecological memory modifies the cumulative impact of recurrent climate extremes

Effects of asymmetric dispersal on the coexistence of competing species

scientific article

Effects of delayed settlement on post-settlement growth and survival of scleractinian coral larvae

scientific article published on 23 March 2013

Effects of photoacclimation on the light niche of corals: a process-based approach

scientific article published in 2009

Effects of sex change on the implications of marine reserves for fisheries.

scientific article

Emergent properties in the responses of tropical corals to recurrent climate extremes

scientific article published on 04 November 2021

Environmental limits to growth: physiological niche boundaries of corals along turbidity-light gradients.

scientific article

Estimating dispersal potential for marine larvae: dynamic models applied to scleractinian corals

scientific article

Evidence for multiple stressor interactions and effects on coral reefs.

scientific article

Farming behaviour of reef fishes increases the prevalence of coral disease associated microbes and black band disease

scientific article published on 01 August 2014

Faunal breaks and species composition of Indo-Pacific corals: the role of plate tectonics, environment and habitat distribution

scientific article (publication date: 22 July 2013)

Fecundity and the demographic strategies of coral morphologies.

scientific article published in December 2016

Fishery consequences of marine reserves: short-term pain for longer-term gain

scientific article published in April 2016

Fitness consequences of female multiple mating: a direct test of indirect benefits

scientific article

Flow and Coral Morphology Control Coral Surface pH: Implications for the Effects of Ocean Acidification

Geographic ranges of reef corals (Cnidaria: Anthozoa: Scleractinia) in the Indo-Pacific

scientific article published in 2013

Global diversity of marine macroalgae: environmental conditions explain less variation in the tropics

article by Sally A. Keith et al published 4 November 2013 in Global Ecology and Biogeography

Global warming and recurrent mass bleaching of corals ⬇️

scientific article

Global warming decreases connectivity among coral populations

scientific article published on 30 December 2021

Global warming impairs stock–recruitment dynamics of corals

article

Global warming transforms coral reef assemblages.

scientific article published on 18 April 2018

Heterospecific Aggression and Dominance in a Guild of Coral-Feeding Fishes: The Roles of Dietary Ecology and Phylogeny ⬇️

scientific article published on June 20, 2013

Hierarchical modeling strengthens evidence for density dependence in observational time series of population dynamics

scientific article published on 19 November 2019

High-frequency sampling and piecewise models reshape dispersal kernels of a common reef coral

scientific article published on 17 May 2019

Human exploitation shapes productivity-biomass relationships on coral reefs

scientific article published on 08 January 2020

INDO-PACIFIC BIODIVERSITY OF CORAL REEFS: DEVIATIONS FROM A MID-DOMAIN MODEL

scientific article published on 04 June 2007

Improving dynamic phytoplankton reserve-utilization models with an indirect proxy for internal nitrogen.

scientific article published on 20 May 2016

Increased local retention of reef coral larvae as a result of ocean warming

scientific article published on 25 April 2014

Integrating modelling of biodiversity composition and ecosystem function

article

Integrating physiological and biomechanical drivers of population growth over environmental gradients on coral reefs ⬇️

scientific article published on March 15, 2012

Interactions between morphological and physiological plasticity optimize energy acquisition in corals

scientific article published on April 2008

Interactive effects of multiple stressors vary with consumer interactions, stressor dynamics and magnitude

scientific article published on 27 April 2022

Long-term shifts in the colony size structure of coral populations along the Great Barrier Reef

scientific article published on 14 October 2020

Marine reserves stabilize fish populations and fisheries yields in disturbed coral reef systems

scientific article published on 14 May 2019

Mechanical vulnerability explains size-dependent mortality of reef corals

scientific article published on 3 June 2014

Mechanism, Process, and Causation in Ecological Models: A Reply to McGill and Potochnik

scientific article published on 23 December 2017

Multiple modes in a coral species abundance distribution

scientific article

Natural experiments and long-term monitoring are critical to understand and predict marine host-microbe ecology and evolution

publication published on 19 August 2021

Negligible effect of competition on coral colony growth.

scientific article published on 22 March 2018

Net effects of life‐history traits explain persistent differences in abundance among similar species

scientific article published in 2022

Network theory and metapopulation persistence: incorporating node self-connections.

scientific article published on 13 June 2017

Nitrate-nitrite dynamics and phytoplankton growth: Formulation and experimental evaluation of a dynamic model

scholarly article by Martino E. Malerba et al published 30 August 2012 in Limnology and Oceanography

Node self-connections and metapopulation persistence: reply to Saura (2018).

scientific article published on 19 February 2018

Nutrient utilization traits vary systematically with intraspecific cell size plasticity

article by Martino E. Malerba et al published 9 May 2016 in Functional Ecology

Ongoing collapse of coral-reef shark populations

scientific article

Partitioning colony size variation into growth and partial mortality

scientific article published on 22 January 2020

Patterns and causes of species richness: a general simulation model for macroecology.

scientific article published in September 2009

Phylogenetic community structure when competition and environmental filtering determine abundances

scientific article published on 08 September 2015

Population growth rates of reef sharks with and without fishing on the great barrier reef: robust estimation with multiple models

scientific article

Prevalence of multimodal species abundance distributions is linked to spatial and taxonomic breadth

scientific article published on 2 November 2016

Process, Mechanism, and Modeling in Macroecology

scientific article

Process-based models of species distributions and the mid-domain effect

scientific article

Projecting coral reef futures under global warming and ocean acidification.

scientific article

Regional variation in the hierarchical partitioning of diversity in coral-dwelling fishes

scientific article

Reply to: Conclusions of low extinction risk for most species of reef-building corals are premature

scientific article published on 14 February 2022

Risk spreading, connectivity, and optimal reserve spacing ⬇️

scientific article published on January 1, 2012

SPACE PREEMPTION, SIZE-DEPENDENT COMPETITION, AND THE COEXISTENCE OF CLONAL GROWTH FORMS

scientific article

Scaling water motion on coral reefs: from regional to organismal scales

scientific article published on 16 August 2006

Sensitivity of coral calcification to ocean acidification: a meta-analysis.

scientific article

Spatial and temporal patterns of mass bleaching of corals in the Anthropocene.

scientific article

Spatial variance in abundance and occupancy of corals across broad geographic scales

scientific article

Species Differences Drive Nonneutral Structure in Pleistocene Coral Communities ⬇️

scientific article published on October 4, 2012

Standard flow cytometry as a rapid and non-destructive proxy for cell nitrogen quota

Synergistic Effects of Marine Reserves and Harvest Controls on the Abundance and Catch Dynamics of a Coral Reef Fishery

scientific article

Synthesizing larval competence dynamics and reef-scale retention reveals a high potential for self-recruitment in corals.

scientific article published in March 2013

THEORY OF MARINE COMMUNITIES: COMPETITION, PREDATION, AND RECRUITMENT-DEPENDENT INTERACTION STRENGTH

scientific article

Testing species abundance models: a new bootstrap approach applied to Indo-Pacific coral reefs

scientific article published on November 2009

The 2014-17 Global Coral Bleaching Event: The Most Severe and Widespread Coral Reef Destruction

The Book of Potentially Catastrophic Science

science experiment book

The Coral Reef Sentinels Program: A Mars Shot for Blue Planetary Health

scientific article published on 14 June 2021

The Coral Trait Database, a curated database of trait information for coral species from the global oceans

scientific article

The population sizes and global extinction risk of reef-building coral species at biogeographic scales

scientific article

The spatial footprint and patchiness of large‐scale disturbances on coral reefs

scientific article

Understanding diversity-stability relationships: towards a unified model of portfolio effects.

scientific article

Volatility in coral cover erodes niche structure, but not diversity, in reef fish assemblages

scientific article published on 15 June 2022

What is macroecology?

scientific article

List of works by Sean R. Connolly

A Latitudinal Gradient In The Structure Of Rocky Intertidal Communities : Benthic-oceanic Coupling In The Northeast Pacific Ocean ⬇️

A Trait-Based Approach to Advance Coral Reef Science

A critique of claims for negative impacts of Marine Protected Areas on fisheries

A latitudinal gradient in northeast Pacific intertidal community structure: evidence for an oceanographically based synthesis of marine community theory

A test of trophic cascade theory: fish and benthic assemblages across a predator density gradient on coral reefs.

A unified model explains commonness and rarity on coral reefs

Aggression, interference, and the functional response of coral-feeding butterflyfishes

Allometric growth in reef-building corals.

An Indo-Pacific coral spawning database

An experimentally validated nitrate–ammonium–phytoplankton model including effects of starvation length and ammonium inhibition on nitrate uptake

Author Correction: The population sizes and global extinction risk of reef-building coral species at biogeographic scales

Biodiversity hotspots, centres of endemicity, and the conservation of coral reefs

Biogeography and the structure of coral reef fish communities on isolated islands

Calcification, Storm Damage and Population Resilience of Tabular Corals under Climate Change ⬇️

Climate-mediated mechanical changes to post-disturbance coral assemblages

Commonness and rarity in the marine biosphere

Community structure of corals and reef fishes at multiple scales

Comparative analysis of energy allocation to tissue and skeletal growth in corals

Connectivity, regime shifts and the resilience of coral reefs

Coral adaptation to climate change: Meta‐analysis reveals high heritability across multiple traits

Coral reef diversity refutes the neutral theory of biodiversity

Coral reef diversity refutes the neutral theory of biodiversity

Coral transplantation triggers shift in microbiome and promotion of coral disease associated potential pathogens

Corrigendum: The Coral Trait Database, a curated database of trait information for coral species from the global oceans

Defining fundamental niche dimensions of corals: synergistic effects of colony size, light, and flow

Dispersal-mediated coexistence under recruitment limitation and displacement competition

Diversity and stability of herbivorous fishes on coral reefs.

Double jeopardy and global extinction risk in corals and reef fishes.

Ecological consequences of major hydrodynamic disturbances on coral reefs

Ecological memory modifies the cumulative impact of recurrent climate extremes

Effects of asymmetric dispersal on the coexistence of competing species

Effects of delayed settlement on post-settlement growth and survival of scleractinian coral larvae

Effects of photoacclimation on the light niche of corals: a process-based approach

Effects of sex change on the implications of marine reserves for fisheries.

Emergent properties in the responses of tropical corals to recurrent climate extremes

Environmental limits to growth: physiological niche boundaries of corals along turbidity-light gradients.

Estimating dispersal potential for marine larvae: dynamic models applied to scleractinian corals

Evidence for multiple stressor interactions and effects on coral reefs.

Farming behaviour of reef fishes increases the prevalence of coral disease associated microbes and black band disease

Faunal breaks and species composition of Indo-Pacific corals: the role of plate tectonics, environment and habitat distribution

Fecundity and the demographic strategies of coral morphologies.

Fishery consequences of marine reserves: short-term pain for longer-term gain

Fitness consequences of female multiple mating: a direct test of indirect benefits

Flow and Coral Morphology Control Coral Surface pH: Implications for the Effects of Ocean Acidification

Geographic ranges of reef corals (Cnidaria: Anthozoa: Scleractinia) in the Indo-Pacific

Global diversity of marine macroalgae: environmental conditions explain less variation in the tropics

Global warming and recurrent mass bleaching of corals ⬇️

Global warming decreases connectivity among coral populations

Global warming impairs stock–recruitment dynamics of corals

Global warming transforms coral reef assemblages.

Heterospecific Aggression and Dominance in a Guild of Coral-Feeding Fishes: The Roles of Dietary Ecology and Phylogeny ⬇️

Hierarchical modeling strengthens evidence for density dependence in observational time series of population dynamics

High-frequency sampling and piecewise models reshape dispersal kernels of a common reef coral

Human exploitation shapes productivity-biomass relationships on coral reefs

INDO-PACIFIC BIODIVERSITY OF CORAL REEFS: DEVIATIONS FROM A MID-DOMAIN MODEL

Improving dynamic phytoplankton reserve-utilization models with an indirect proxy for internal nitrogen.

Increased local retention of reef coral larvae as a result of ocean warming

Integrating modelling of biodiversity composition and ecosystem function

Integrating physiological and biomechanical drivers of population growth over environmental gradients on coral reefs ⬇️

Interactions between morphological and physiological plasticity optimize energy acquisition in corals

Interactive effects of multiple stressors vary with consumer interactions, stressor dynamics and magnitude

Long-term shifts in the colony size structure of coral populations along the Great Barrier Reef

Marine reserves stabilize fish populations and fisheries yields in disturbed coral reef systems

Mechanical vulnerability explains size-dependent mortality of reef corals

Mechanism, Process, and Causation in Ecological Models: A Reply to McGill and Potochnik

Multiple modes in a coral species abundance distribution

Natural experiments and long-term monitoring are critical to understand and predict marine host-microbe ecology and evolution

Negligible effect of competition on coral colony growth.

Net effects of life‐history traits explain persistent differences in abundance among similar species

Network theory and metapopulation persistence: incorporating node self-connections.

Nitrate-nitrite dynamics and phytoplankton growth: Formulation and experimental evaluation of a dynamic model

Node self-connections and metapopulation persistence: reply to Saura (2018).

Nutrient utilization traits vary systematically with intraspecific cell size plasticity

Ongoing collapse of coral-reef shark populations

Partitioning colony size variation into growth and partial mortality

Patterns and causes of species richness: a general simulation model for macroecology.

Phylogenetic community structure when competition and environmental filtering determine abundances

Population growth rates of reef sharks with and without fishing on the great barrier reef: robust estimation with multiple models

Prevalence of multimodal species abundance distributions is linked to spatial and taxonomic breadth