List of works - Forest M. White

14-3-3sigma controls mitotic translation to facilitate cytokinesis

scientific article published on March 2007

A Thermodynamic-Based Interpretation of Protein Expression Heterogeneity in Different Glioblastoma Multiforme Tumors Identifies Tumor-Specific Unbalanced Processes.

scientific article published on April 2016

A developmentally regulated translational control pathway establishes the meiotic chromosome segregation pattern

scientific article published on October 2013

A hyperglycemic peptide hormone from the Caribbean shrimp Penaeus (litopenaeus) schmitti☆

scientific article published on 01 March 2000

ATRX directs binding of PRC2 to Xist RNA and Polycomb targets

scientific article

Acquired MET expression confers resistance to EGFR inhibition in a mouse model of glioblastoma multiforme.

scientific article published on 24 October 2011

Adaptive protein and phosphoprotein networks which promote therapeutic sensitivity or acquired resistance.

scientific article

An integrated comparative phosphoproteomic and bioinformatic approach reveals a novel class of MPM-2 motifs upregulated in EGFRvIII-expressing glioblastoma cells

scientific article

Application of micro-electrospray liquid chromatography techniques to FT-ICR MS to enable high-sensitivity biological analysis

article

CNS Anticancer Drug Discovery and Development Conference White Paper.

scientific article

Camptothecin resistance is determined by the regulation of topoisomerase I degradation mediated by ubiquitin proteasome pathway.

scientific article published on 18 March 2017

Cell system perturbation for time-resolved quantification of tyrosine phosphorylation in complex samples

scientific article published in January 2006

Characterization and evolutionary relevance of the sperm nuclear basic proteins from stickleback fish

scientific article published on 01 October 2000

Characterization of In Vivo Resistance to Osimertinib and JNJ-61186372, an EGFR/Met Bispecific Antibody, Reveals Unique and Consensus Mechanisms of Resistance.

scientific article

Collecting and organizing systematic sets of protein data

scientific article

Combination antibody treatment down-regulates epidermal growth factor receptor by inhibiting endosomal recycling.

scientific article

Computer aided manual validation of mass spectrometry-based proteomic data

scientific article

Corrigendum to ‘A hyperglycemic peptide hormone from the Caribbean shrimp Penaeus (litopenaeus) schmitti’☆

scientific article published on 01 May 2000

EGFRvIV: a previously uncharacterized oncogenic mutant reveals a kinase autoinhibitory mechanism.

scientific article published on 2 August 2010

Early signaling dynamics of the epidermal growth factor receptor.

scientific article published on 29 February 2016

Electrospray ionization Fourier transform ion cyclotron resonance at 9.4 T

scientific article published on 01 January 1996

Engineered bromodomains to explore the acetylproteome

scientific article published on 5 March 2015

Epidermal growth factor receptor downregulation by small heterodimeric binding proteins

scientific article

Exploration of CTCF post-translation modifications uncovers Serine-224 phosphorylation by PLK1 at pericentric regions during the G2/M transition

scientific article published on 24 January 2019

Global phosphoproteome of HT-29 human colon adenocarcinoma cells

scientific article

Hepatic Dysfunction Caused by Consumption of a High-Fat Diet.

scientific article published in December 2017

High-fat diet in a mouse insulin-resistant model induces widespread rewiring of the phosphotyrosine signaling network

scientific article published on 01 August 2019

How many human proteoforms are there?

scientific article published in February 2018

Identification by mass spectrometry of CD8(+)-T-cell Mycobacterium tuberculosis epitopes within the Rv0341 gene product

scientific article

Identification of Direct Kinase Substrates Using Analogue-Sensitive Alleles.

scientific article published on January 2016

Identifying and Targeting Sporadic Oncogenic Genetic Aberrations in Mouse Models of Triple Negative Breast Cancer

scientific article published on 4 December 2017

Illuminating signaling network functional biology through quantitative phosphoproteomic mass spectrometry

scientific article published on 01 September 2008

Integrated mapping of pharmacokinetics and pharmacodynamics in a patient-derived xenograft model of glioblastoma

scientific article published in Nature Communications

Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels

scientific article

Labeling and Identification of Direct Kinase Substrates ⬇️

scientific article published on June 5, 2012

Light-Regulated allosteric switch enables temporal and subcellular control of enzyme activity

scientific article published on 23 September 2020

MARQUIS: a multiplex method for absolute quantification of peptides and posttranslational modifications

scientific article

MCAM: multiple clustering analysis methodology for deriving hypotheses and insights from high-throughput proteomic datasets

scientific article

Manual validation of peptide sequence and sites of tyrosine phosphorylation from MS/MS spectra.

scientific article

Mcl-1 integrates the opposing actions of signaling pathways that mediate survival and apoptosis

scientific article published on 11 May 2009

Measurement of Phosphorylated Peptides with Absolute Quantification

scientific article published in January 2016

Methods for the Analysis of Protein Phosphorylation-Mediated Cellular Signaling Networks

scientific article published on 30 March 2016

Microtubule-Based Control of Motor-Clutch System Mechanics in Glioma Cell Migration

scientific article published on 01 November 2018

Minor Changes in Expression of the Mismatch Repair Protein MSH2 Exert a Major Impact on Glioblastoma Response to Temozolomide

scientific article published on 29 May 2015

Modeling HER2 effects on cell behavior from mass spectrometry phosphotyrosine data

scientific article

Molecular Characterization of EGFR and EGFRvIII Signaling Networks in Human Glioblastoma Tumor Xenografts ⬇️

scientific article published on September 10, 2012

Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks

scholarly article

Multiplexed relative and absolute quantitative immunopeptidomics reveals MHC I repertoire alterations induced by CDK4/6 inhibition

scientific article published on 02 June 2020

Network Modeling Identifies Patient-specific Pathways in Glioblastoma.

scientific article published on 29 June 2016

On the iTRAQ of kinase inhibitors

scientific article

On-demand dissolution of modular, synthetic extracellular matrix reveals local epithelial-stromal communication networks.

scientific article published on 23 March 2017

Oncogenic EGFR signaling networks in glioma

scientific article published on 08 September 2009

PTMScout, a Web resource for analysis of high throughput post-translational proteomics studies

scientific article

PTP1B-dependent regulation of receptor tyrosine kinase signaling by the actin-binding protein Mena

scientific article

Phosphoproteome analysis of capacitated human sperm. Evidence of tyrosine phosphorylation of a kinase-anchoring protein 3 and valosin-containing protein/p97 during capacitation

scientific article (publication date: 28 March 2003)

Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.

scientific article published in January 2006

Phosphoproteomics identifies microglial Siglec-F inflammatory response during neurodegeneration

scientific article published on 01 December 2020

Phosphoproteomics: unraveling the signaling web.

scientific article published on September 2008

Phosphorylated peptides are naturally processed and presented by major histocompatibility complex class I molecules in vivo

scientific article

Phosphotyrosine profiling of NSCLC cells in response to EGF and HGF reveals network specific mediators of invasion.

scientific article published on 11 March 2013

Phosphotyrosine signaling analysis in human tumors is confounded by systemic ischemia-driven artifacts and intra-specimen heterogeneity

scientific article

Phosphotyrosine signaling analysis of site-specific mutations on EGFRvIII identifies determinants governing glioblastoma cell growth

scientific article published on 11 May 2010

Platform for micro-invasive membrane-free biochemical sampling of brain interstitial fluid

scientific article published on 25 September 2020

Quantification of isomers from a mixture of twelve heparin and heparan sulfate disaccharides using tandem mass spectrometry

scientific article published in January 2005

Quantitative Analysis of Tyrosine Kinase Signaling Across Differentially Embedded Human Glioblastoma Tumors

scientific article published in January 2018

Quantitative Profiling of Lysine Acetylation Reveals Dynamic Crosstalk between Receptor Tyrosine Kinases and Lysine Acetylation

scientific article published on 15 May 2015

Quantitative analysis of EGFRvIII cellular signaling networks reveals a combinatorial therapeutic strategy for glioblastoma

scholarly article

Quantitative analysis of signaling networks across differentially embedded tumors highlights interpatient heterogeneity in human glioblastoma

scientific article published on 24 June 2014

Quantitative phosphoproteomic analysis of T cell receptor signaling in diabetes prone and resistant mice

scientific article published on June 2010

Quantitative phosphoproteomic analysis of signaling network dynamics.

scientific article published on 24 July 2008

Quantitative phosphoproteomics by mass spectrometry: past, present, and future

scientific article

Rec8 phosphorylation and recombination promote the step-wise loss of cohesins in meiosis

scientific article published on 3 May 2006

Regulation and specificity of S-nitrosylation and denitrosylation.

scientific article published on November 2006

Reply to Comment on "Sloppy models, parameter uncertainty, and the role of experimental design"

scientific article published on August 2011

Revealing disease-associated pathways by network integration of untargeted metabolomics.

scientific article published on August 2016

Signaling for death: tyrosine phosphorylation in the response to glucose deprivation.

scientific article published on 26 June 2012

Src homology 2 domains enhance tyrosine phosphorylation in vivo by protecting binding sites in their target proteins from dephosphorylation.

scientific article published on 21 November 2017

Stimulus design for model selection and validation in cell signaling

scientific article

Structural characterization of phospholipids by matrix-assisted laser desorption/ionization Fourier transform ion cyclotron resonance mass spectrometry.

scientific article published on November 1995

System level dynamics of post-translational modifications.

scientific article published on 15 January 2014

Systemic analysis of tyrosine kinase signaling reveals a common adaptive response program in a HER2-positive breast cancer

scientific article published on 22 January 2019

Systems-pharmacology dissection of a drug synergy in imatinib-resistant CML.

scientific article

Temporal dynamics of tyrosine phosphorylation in insulin signaling.

scientific article

The bromodomain protein Brd4 insulates chromatin from DNA damage signalling

scientific article

The oncogenic lung cancer fusion kinase CD74-ROS activates a novel invasiveness pathway through E-Syt1 phosphorylation.

scientific article published on June 2012

The potential cost of high-throughput proteomics

scientific article

Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules

scientific article

Time-resolved multimodal analysis of Src Homology 2 (SH2) domain binding in signaling by receptor tyrosine kinases

scientific article (publication date: 12 April 2016)

Toward quantitative phosphotyrosine profiling in vivo.

scientific article

Using small molecules and chemical genetics to interrogate signaling networks.

scientific article

Vascular endothelial growth factor (VEGF) and platelet (PF-4) factor 4 inputs modulate human microvascular endothelial signaling in a three-dimensional matrix migration context.

scientific article

Weak agonist self-peptides promote selection and tuning of virus-specific T cells

scientific article published in March 2003

List of works by Forest M. White

14-3-3sigma controls mitotic translation to facilitate cytokinesis

A Thermodynamic-Based Interpretation of Protein Expression Heterogeneity in Different Glioblastoma Multiforme Tumors Identifies Tumor-Specific Unbalanced Processes.

A developmentally regulated translational control pathway establishes the meiotic chromosome segregation pattern

A hyperglycemic peptide hormone from the Caribbean shrimp Penaeus (litopenaeus) schmitti☆

ATRX directs binding of PRC2 to Xist RNA and Polycomb targets

Acquired MET expression confers resistance to EGFR inhibition in a mouse model of glioblastoma multiforme.

Adaptive protein and phosphoprotein networks which promote therapeutic sensitivity or acquired resistance.

An integrated comparative phosphoproteomic and bioinformatic approach reveals a novel class of MPM-2 motifs upregulated in EGFRvIII-expressing glioblastoma cells

Application of micro-electrospray liquid chromatography techniques to FT-ICR MS to enable high-sensitivity biological analysis

CNS Anticancer Drug Discovery and Development Conference White Paper.

Camptothecin resistance is determined by the regulation of topoisomerase I degradation mediated by ubiquitin proteasome pathway.

Cell system perturbation for time-resolved quantification of tyrosine phosphorylation in complex samples

Characterization and evolutionary relevance of the sperm nuclear basic proteins from stickleback fish

Characterization of In Vivo Resistance to Osimertinib and JNJ-61186372, an EGFR/Met Bispecific Antibody, Reveals Unique and Consensus Mechanisms of Resistance.

Collecting and organizing systematic sets of protein data

Combination antibody treatment down-regulates epidermal growth factor receptor by inhibiting endosomal recycling.

Computer aided manual validation of mass spectrometry-based proteomic data

Corrigendum to ‘A hyperglycemic peptide hormone from the Caribbean shrimp Penaeus (litopenaeus) schmitti’☆

EGFRvIV: a previously uncharacterized oncogenic mutant reveals a kinase autoinhibitory mechanism.

Early signaling dynamics of the epidermal growth factor receptor.

Electrospray ionization Fourier transform ion cyclotron resonance at 9.4 T

Engineered bromodomains to explore the acetylproteome

Epidermal growth factor receptor downregulation by small heterodimeric binding proteins

Exploration of CTCF post-translation modifications uncovers Serine-224 phosphorylation by PLK1 at pericentric regions during the G2/M transition

Global phosphoproteome of HT-29 human colon adenocarcinoma cells

Hepatic Dysfunction Caused by Consumption of a High-Fat Diet.

High-fat diet in a mouse insulin-resistant model induces widespread rewiring of the phosphotyrosine signaling network

How many human proteoforms are there?

Identification by mass spectrometry of CD8(+)-T-cell Mycobacterium tuberculosis epitopes within the Rv0341 gene product

Identification of Direct Kinase Substrates Using Analogue-Sensitive Alleles.

Identifying and Targeting Sporadic Oncogenic Genetic Aberrations in Mouse Models of Triple Negative Breast Cancer

Illuminating signaling network functional biology through quantitative phosphoproteomic mass spectrometry

Integrated mapping of pharmacokinetics and pharmacodynamics in a patient-derived xenograft model of glioblastoma

Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels

Labeling and Identification of Direct Kinase Substrates ⬇️

Light-Regulated allosteric switch enables temporal and subcellular control of enzyme activity

MARQUIS: a multiplex method for absolute quantification of peptides and posttranslational modifications

MCAM: multiple clustering analysis methodology for deriving hypotheses and insights from high-throughput proteomic datasets

Manual validation of peptide sequence and sites of tyrosine phosphorylation from MS/MS spectra.

Mcl-1 integrates the opposing actions of signaling pathways that mediate survival and apoptosis

Measurement of Phosphorylated Peptides with Absolute Quantification

Methods for the Analysis of Protein Phosphorylation-Mediated Cellular Signaling Networks

Microtubule-Based Control of Motor-Clutch System Mechanics in Glioma Cell Migration

Minor Changes in Expression of the Mismatch Repair Protein MSH2 Exert a Major Impact on Glioblastoma Response to Temozolomide

Modeling HER2 effects on cell behavior from mass spectrometry phosphotyrosine data

Molecular Characterization of EGFR and EGFRvIII Signaling Networks in Human Glioblastoma Tumor Xenografts ⬇️

Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks

Multiplexed relative and absolute quantitative immunopeptidomics reveals MHC I repertoire alterations induced by CDK4/6 inhibition

Network Modeling Identifies Patient-specific Pathways in Glioblastoma.

On the iTRAQ of kinase inhibitors

On-demand dissolution of modular, synthetic extracellular matrix reveals local epithelial-stromal communication networks.

Oncogenic EGFR signaling networks in glioma

PTMScout, a Web resource for analysis of high throughput post-translational proteomics studies

PTP1B-dependent regulation of receptor tyrosine kinase signaling by the actin-binding protein Mena

Phosphoproteome analysis of capacitated human sperm. Evidence of tyrosine phosphorylation of a kinase-anchoring protein 3 and valosin-containing protein/p97 during capacitation

Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.

Phosphoproteomics identifies microglial Siglec-F inflammatory response during neurodegeneration

Phosphoproteomics: unraveling the signaling web.

Phosphorylated peptides are naturally processed and presented by major histocompatibility complex class I molecules in vivo

Phosphotyrosine profiling of NSCLC cells in response to EGF and HGF reveals network specific mediators of invasion.

Phosphotyrosine signaling analysis in human tumors is confounded by systemic ischemia-driven artifacts and intra-specimen heterogeneity

Phosphotyrosine signaling analysis of site-specific mutations on EGFRvIII identifies determinants governing glioblastoma cell growth

Platform for micro-invasive membrane-free biochemical sampling of brain interstitial fluid

Quantification of isomers from a mixture of twelve heparin and heparan sulfate disaccharides using tandem mass spectrometry

Quantitative Analysis of Tyrosine Kinase Signaling Across Differentially Embedded Human Glioblastoma Tumors

Quantitative Profiling of Lysine Acetylation Reveals Dynamic Crosstalk between Receptor Tyrosine Kinases and Lysine Acetylation

Quantitative analysis of EGFRvIII cellular signaling networks reveals a combinatorial therapeutic strategy for glioblastoma

Quantitative analysis of signaling networks across differentially embedded tumors highlights interpatient heterogeneity in human glioblastoma

Quantitative phosphoproteomic analysis of T cell receptor signaling in diabetes prone and resistant mice

Quantitative phosphoproteomic analysis of signaling network dynamics.

Quantitative phosphoproteomics by mass spectrometry: past, present, and future

Rec8 phosphorylation and recombination promote the step-wise loss of cohesins in meiosis

Regulation and specificity of S-nitrosylation and denitrosylation.

Reply to Comment on "Sloppy models, parameter uncertainty, and the role of experimental design"

Revealing disease-associated pathways by network integration of untargeted metabolomics.

Signaling for death: tyrosine phosphorylation in the response to glucose deprivation.

Src homology 2 domains enhance tyrosine phosphorylation in vivo by protecting binding sites in their target proteins from dephosphorylation.

Stimulus design for model selection and validation in cell signaling

Structural characterization of phospholipids by matrix-assisted laser desorption/ionization Fourier transform ion cyclotron resonance mass spectrometry.