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List of works by Yohann Couté

A MORC-driven transcriptional switch controls Toxoplasma developmental trajectories and sexual commitment

scientific article published on 24 February 2020

A Soluble Metabolon Synthesizes the Isoprenoid Lipid Ubiquinone

scientific article published on 24 January 2019

A Toxoplasma dense granule protein, GRA24, modulates the early immune response to infection by promoting a direct and sustained host p38 MAPK activation.

scientific article published on 16 September 2013

A Type III Secretion Negative Clinical Strain of Pseudomonas aeruginosa Employs a Two-Partner Secreted Exolysin to Induce Hemorrhagic Pneumonia

scientific article published in February 2014

A meiotic XPF-ERCC1-like complex recognizes joint molecule recombination intermediates to promote crossover formation

scientific article published on 9 February 2018

A micro-silicon chip for in vivo cerebral imprint in monkey

scientific article published on 15 January 2013

A proteomic approach of the endocrine tumors

scientific article published on 18 April 2008

A receptor pair with an integrated decoy converts pathogen disabling of transcription factors to immunity

scientific article published in May 2015

An ABC transporter and an outer membrane lipoprotein participate in posttranslational activation of type VI secretion in Pseudomonas aeruginosa.

scientific article

An algal photoenzyme converts fatty acids to hydrocarbons.

scientific article published in September 2017

Bdf1 Bromodomains Are Essential for Meiosis and the Expression of Meiotic-Specific Genes

scientific article

Benchmarking quantitative label-free LC-MS data processing workflows using a complex spiked proteomic standard dataset.

scientific article

Bone Morphogenetic Protein 9 Is a Paracrine Factor Controlling Liver Sinusoidal Endothelial Cell Fenestration and Protecting Against Hepatic Fibrosis

scientific article published on 31 May 2019

Calibration plot for proteomics: A graphical tool to visually check the assumptions underlying FDR control in quantitative experiments.

scientific article

Characteristics in limbic encephalitis with anti-adenylate kinase 5 autoantibodies

scientific article published on 6 January 2017

Characterization by two-dimensional gel electrophoresis of host proteins whose synthesis is sustained or stimulated during the course of herpes simplex virus type 1 infection

scientific article published in July 2000

Characterization of a effector uncovers an alternative GSK3/β-catenin-regulatory pathway of inflammation

scientific article published on 15 October 2018

Characterization of the Arabidopsis thaliana 2-Cys peroxiredoxin interactome.

scientific article

Chlamydomonas reinhardtii chloroplasts contain a homodimeric pyruvate:ferredoxin oxidoreductase that functions with FDX1.

scientific article published on 15 November 2012

Comprehensive and comparative exploration of the Atp7b-/- mouse plasma proteome

scientific article published on 09 December 2019

Concerted Up-regulation of Aldehyde/Alcohol Dehydrogenase (ADHE) and Starch in Chlamydomonas reinhardtii Increases Survival under Dark Anoxia

scientific article published on 22 December 2016

Constrained G4 structures unveil topology specificity of known and new G4 binding proteins

scientific article published on 29 June 2021

Cross-talk between the calcium channel TRPV4 and reactive oxygen species interlocks adhesive and degradative functions of invadosomes

scientific article published on 01 February 2021

Cyclins B1, T1, and H differ in their molecular mode of interaction with cytomegalovirus protein kinase pUL97

scientific article published on 19 February 2019

DAPAR & ProStaR: software to perform statistical analyses in quantitative discovery proteomics

scientific article published on 6 September 2016

DNA binding of the p21 repressor ZBTB2 is inhibited by cytosine hydroxymethylation.

scientific article published on 4 March 2014

Deciphering the human nucleolar proteome

scientific article (publication date: March 2006)

Dissecting the Shared and Context-Dependent Pathways Mediated by the p140Cap Adaptor Protein in Cancer and in Neurons

scientific article published on 15 October 2019

Diversity and evolution of the emerging Pandoraviridae family.

scientific article

Dual activity of quinolinate synthase: triose phosphate isomerase and dehydration activities play together to form quinolinate

scientific article published on 16 October 2015

Early activation of the fatty acid metabolism pathway by chronic high glucose exposure in rat insulin secretory beta-cells

scientific article published on January 2010

Environmental cues from neural crest derivatives act as metastatic triggers in an embryonic neuroblastoma model

scientific article published on 10 May 2022

Evaluation of the ability of Bifidobacterium longum to metabolize human intestinal mucus.

scientific article

Evidence for rRNA 2'-O-methylation plasticity: Control of intrinsic translational capabilities of human ribosomes.

scientific article published on 20 November 2017

Evolution of gene dosage on the Z-chromosome of schistosome parasites

article

Exploration of the propagation of transpovirons within Mimiviridae reveals a unique example of commensalism in the viral world

scientific article published on 10 December 2019

Externalized Keratin 8: A Target at the Interface of Microenvironment and Intracellular Signaling in Colorectal Cancer Cells

scientific article published on 16 November 2018

Extracellular riboflavin induces anaerobic biofilm formation in Shewanella oneidensis

scientific article published on 03 June 2021

Francisella tularensis: FupA mutation contributes to fluoroquinolone resistance by increasing vesicle secretion and biofilm formation

scientific article published on 01 January 2019

Glucotoxicity and pancreatic proteomics

scientific article

Histone Variant H2A.L.2 Guides Transition Protein-Dependent Protamine Assembly in Male Germ Cells.

scientific article

Homozygous deletion of EPB41 genuine AUG-containing exons results in mRNA splicing defects, NMD activation and protein 4.1R complete deficiency in hereditary elliptocytosis.

scientific article

Host cell subversion by Toxoplasma GRA16, an exported dense granule protein that targets the host cell nucleus and alters gene expression.

scientific article published on April 2013

Human ribosomes from cells with reduced dyskerin levels are intrinsically altered in translation.

scientific article published on May 2015

Hybrid cluster proteins in a photosynthetic microalga

scientific article published on 29 August 2019

ISG20L2, a novel vertebrate nucleolar exoribonuclease involved in ribosome biogenesis

scientific journal article

Identification of new interacting partners of the shuttling protein ubinuclein (Ubn-1).

scientific article

Identification of the Arabidopsis Calmodulin-Dependent NAD+ Kinase That Sustains the Elicitor-Induced Oxidative Burst

scientific article published on 25 September 2019

Identifying USPs regulating immune signals in Drosophila: USP2 deubiquitinates Imd and promotes its degradation by interacting with the proteasome

scientific article

Improved characterization of the insulin secretory granule proteomes

scientific article published on 27 April 2012

In-depth study of Mollivirus sibericum, a new 30,000-y-old giant virus infecting Acanthamoeba

scientific article

Insertion sequences drive the emergence of a highly adapted human pathogen

scientific article published on 04 April 2019

Interactome of the yeast RNA polymerase III transcription machinery constitutes several chromatin modifiers and regulators of the genes transcribed by RNA polymerase II

scientific article published on 26 December 2018

Introducing plasma/serum glycodepletion for the targeted proteomics analysis of cytolysis biomarkers

scientific article published on 19 April 2017

Labeling of Bifidobacterium longum cells with 13C-substituted leucine for quantitative proteomic analyses

scientific article

Liquid Biopsy of Bile based on Targeted Mass Spectrometry for the Diagnosis of Malignant Biliary Strictures

scientific article published on 13 October 2020

Looking for Missing Proteins in the Proteome of Human Spermatozoa: An Update.

scientific article published on 22 July 2016

Mechanisms of local invasion in enteroendocrine tumors: identification of novel candidate cytoskeleton-associated proteins in an experimental mouse model by a proteomic approach and validation in human tumors.

scientific article published on 16 September 2014

Microglia modulate gliotransmission through the regulation of VAMP2 proteins in astrocytes

scientific article published on 07 July 2020

Modifications at K31 on the lateral surface of histone H4 contribute to genome structure and expression in apicomplexan parasites.

scientific article published on 4 November 2017

Modulation of neuronal pentraxin 1 expression in rat pancreatic β-cells submitted to chronic glucotoxic stress

scientific journal article

Modulatory role of the anti-apoptotic protein kinase CK2 in the sub-cellular localization of Fas associated death domain protein (FADD).

scientific article published on 4 August 2015

Multi-dimensional HPLC/MS of the nucleolar proteome using HPLC-chip/MS.

scientific article published in March 2006

Neuropeptidome of the Cephalopod Sepia officinalis: Identification, Tissue Mapping, and Expression Pattern of Neuropeptides and Neurohormones during Egg Laying.

scientific article published on 3 December 2015

Noumeavirus replication relies on a transient remote control of the host nucleus

scientific article

Novel cytomegalovirus-inhibitory compounds of the class pyrrolopyridines show a complex pattern of target binding that suggests an unusual mechanism of antiviral activity

scientific article published on 27 September 2018

Nuclear Functions of Nucleolin through Global Proteomics and Interactomic Approaches.

scientific article

Nucleolin interacts with US11 protein of herpes simplex virus 1 and is involved in its trafficking

scientific article published on 30 November 2011

Nut Directs p300-Dependent, Genome-Wide H4 Hyperacetylation in Male Germ Cells

scientific article published on 01 September 2018

Outer membrane vesicles are vehicles for the delivery of Vibrio tasmaniensis virulence factors to oyster immune cells

scientific article published on 9 July 2014

Pandoravirus Celtis Illustrates the Microevolution Processes at Work in the Giant Genomes

scientific article published on 08 March 2019

Pandoraviruses: amoeba viruses with genomes up to 2.5 Mb reaching that of parasitic eukaryotes.

scientific article

PepS: An Innovative Microfluidic Device for Bedside Whole Blood Processing before Plasma Proteomics Analyses

scientific article published on 15 December 2020

Physical and functional interaction between SET1/COMPASS complex component CFP-1 and a Sin3S HDAC complex in C. elegans

scientific article published on 01 December 2019

Profiling of ob/ob mice skeletal muscle exosome-like vesicles demonstrates combined action of miRNAs, proteins and lipids to modulate lipid homeostasis in recipient cells

scientific article published on 03 November 2021

Protein Biomarker Discovery in Non-depleted Serum by Spectral Library-Based Data-Independent Acquisition Mass Spectrometry

scientific article published on 01 January 2019

Protein kinases responsible for the phosphorylation of the nuclear egress core complex of human cytomegalovirus.

scientific article published on 27 September 2017

Proteomic Interaction Patterns between Human Cyclins, the Cyclin-Dependent Kinase Ortholog pUL97 and Additional Cytomegalovirus Proteins

scientific article published on 18 August 2016

Proteomic analysis of C2C12 myoblast and myotube exosome-like vesicles: a new paradigm for myoblast-myotube cross talk?

scientific article

Proteomic analysis of the SH2 domain-containing leukocyte protein of 76 kDa (SLP76) interactome in resting and activated primary mast cells [corrected].

scientific article published on 2 July 2013

Proteomic analysis of the multimeric nuclear egress complex of human cytomegalovirus

scientific article published on 26 June 2014

Proteomic characterization of human exhaled breath condensate

scientific article published on 30 November 2017

Proteomics analysis of insulin secretory granules.

scientific article published on 22 February 2007

Proteomics of regulated secretory organelles

scientific article published on September 2009

Pycnosomes: Condensed Endosomal Structures Secreted by Dictyostelium Amoebae

scientific article

Quantitative proteomics reveals the link between minichromosome maintenance complex and glucose-induced proliferation of rat pancreatic INS-1E β-cells

scientific article

RNA clamping by Vasa assembles a piRNA amplifier complex on transposon transcripts

scientific article

Regulation of postsynaptic function by the dementia-related ESCRT-III subunit CHMP2B

scientific article

Rhomboid intramembrane protease YqgP licenses bacterial membrane protein quality control as adaptor of FtsH AAA protease

scientific article published on 13 January 2020

Ribosomal Proteins Regulate MHC Class I Peptide Generation for Immunosurveillance

scientific article published on 31 January 2019

Ribosomal protein gene RPL9 variants can differentially impair ribosome function and cellular metabolism

scientific article published on 01 January 2020

Roles of paxillin family members in adhesion and ECM degradation coupling at invadosomes

scientific article

Rotator Cuff Tenocytes Differentiate into Hypertrophic Chondrocyte-Like Cells to Produce Calcium Deposits in an Alkaline Phosphatase-Dependent Manner

scientific article published on 26 September 2019

Ruminococcin C, a promising antibiotic produced by a human gut symbiont

scientific article published on 25 September 2019

SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans

scientific article published in November 2023

Short- and long-term efficacy of electroconvulsive stimulation in animal models of depression: The essential role of neuronal survival

scientific article published on 15 August 2018

Spiked proteomic standard dataset for testing label-free quantitative software and statistical methods.

scientific article

Structural and functional analysis of the Francisella lysine decarboxylase as a key actor in oxidative stress resistance

scientific article published on 13 January 2021

Synaptic Interactome Mining Reveals p140Cap as a New Hub for PSD Proteins Involved in Psychiatric and Neurological Disorders

scientific article

Synthesis of artemisinin-derived di/tri-mers and dendrimers, investigation of their activity against P. falciparum and cytomegalovirus, and insights into their mechanisms of action.

scientific article published on 23 March 2018

TOX4 and its binding partners recognize DNA adducts generated by platinum anticancer drugs

scientific article published on 22 December 2010

TRIM9 and TRIM67 Are New Targets in Paraneoplastic Cerebellar Degeneration

article

Target verification of artesunate-related antiviral drugs: assessing the role of mitochondrial and regulatory proteins by click chemistry and fluorescence labeling

scientific article published on 23 June 2020

The BCC7 Protein Contributes to the <i>Toxoplasma</i> Basal Pole by Interfacing between the MyoC Motor and the IMC Membrane Network

scientific article published on 26 May 2022

The Long Hunt for pssR-Looking for a Phospholipid Synthesis Transcriptional Regulator, Finding the Ribosome.

scientific article published on 8 May 2017

The PHD finger protein Spp1 has distinct functions in the Set1 and the meiotic DSB formation complexes

scientific article published on 14 February 2018

The Toxoplasma effector TEEGR promotes parasite persistence by modulating NF-κB signalling via EZH2

scientific article published on 29 April 2019

The cell-envelope proteome of Bifidobacterium longum in an in vitro bile environment

scientific article published in March 2009

The centrosome is an actin-organizing centre.

scientific article

The hexosamine pathway and coat complex II promote malignant adaptation to nutrient scarcity

scientific article published on 08 April 2022

The poly-gamma-glutamate of Bacillus subtilis interacts specifically with silver nanoparticles.

scientific article

The protein ICP0 of herpes simplex virus type 1 is targeted to nucleoli of infected cells. Brief report.

scientific article

The unusual structure of Ruminococcin C1 antimicrobial peptide confers clinical properties

scientific article published on 27 July 2020

Thirty-thousand-year-old distant relative of giant icosahedral DNA viruses with a pandoravirus morphology

scientific article

Toxoplasma gondii TgIST co-opts host chromatin repressors dampening STAT1-dependent gene regulation and IFN-γ-mediated host defenses.

scientific article published on 08 August 2016

Triadin and CLIMP-63 form a link between triads and microtubules in muscle cells.

scientific article published on 25 August 2016

USP1 links platinum resistance to cancer cell dissemination by regulating Snail stability

scientific article published on 08 May 2019

Unbalanced expression of CK2 kinase subunits is sufficient to drive epithelial-to-mesenchymal transition by Snail1 induction.

scientific article

Unique features of a Pseudomonas aeruginosa α2-macroglobulin homolog.

scientific article published on 06 August 2013

Uses and misuses of the fudge factor in quantitative discovery proteomics.

scientific article

V-erbA generates ribosomes devoid of RPL11 and regulates translational activity in avian erythroid progenitors.

scientific article published on 8 April 2013

Vasohibins/SVBP are tubulin carboxypeptidases (TCPs) that regulate neuron differentiation.

scientific article

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