List of works - Akhil Chandra Banerjea

A conserved matrix epitope based DNA vaccine protects mice against influenza A virus challenge

scientific article

Arginine rich short linear motif of HIV-1 regulatory proteins inhibits dicer dependent RNA interference

scientific article (publication date: 11 September 2013)

Bispecific short hairpin siRNA constructs targeted to CD4, CXCR4, and CCR5 confer HIV-1 resistance

scientific article published on January 2003

C-terminal half of HIV-1 Vif C possesses major determinant for APOBEC3G degradation

scientific article

Characterization of natural HIV-1 Tat and Vpr variants from Northern India

scientific article published on 4 May 2012

Correction: HIV-1 Tat potently stabilises Mdm2 and enhances viral replication

scientific article published on 9 November 2017

Cross-protective effect of antisense oligonucleotide developed against the common 3' NCR of influenza A virus genome

scientific article published in November 2013

Curcumin inhibits HIV-1 by promoting Tat protein degradation

scientific article published on 10 June 2016

DNA-enzyme-mediated cleavage of human immunodeficiency virus type 1 Gag RNA is significantly augmented by antisense-DNA molecules targeted to hybridize close to the cleavage site

scientific article

Dengue NS3, an RNAi suppressor, modulates the human miRNA pathways through its interacting partner

scientific article published on 28 July 2015

Design, Synthesis, and Biological Evaluation of 1,2-Dihydroisoquinolines as HIV-1 Integrase Inhibitors

scientific article

Diversity of HIV type 1 long terminal repeat (LTR) sequences following mother-to-child transmission in North India

scientific article published on 7 October 2010

Effect of nasal immunization with protective antigen of Bacillus anthracis on protective immune response against anthrax toxin

scientific article published in June 2002

Effect on HIV-1 gene expression, Tat-Vpr interaction and cell apoptosis by natural variants of HIV-1 Tat exon 1 and Vpr from Northern India

scientific article

Functional analysis of HIV-1 subtypes B and C HIV-1 Tat exons and RGD/QGD motifs with respect to Tat-mediated transactivation and apoptosis

scientific article published in August 2008

Functional characterization of HIV-1 Tat exon-1 variants from North India and their implications on HIV-1 transactivation and TAR interaction

scientific article published on 27 May 2014

Genetic analysis of HIV-1 Circulating Recombinant Form 02_AG, B and C subtype-specific envelope sequences from Northern India and their predicted co-receptor usage

scientific article published on 03 December 2009

Genetic and Functional Characterization of HIV-1 Vpu from HIV-1-Infected North Indian Population

scientific article published on 13 October 2020

Genetic and functional analysis of HIV-1 Rev Responsive Element (RRE) sequences from North-India

scientific article

Genetic and functional characterization of HIV-1 Vif on APOBEC3G degradation: First report of emergence of B/C recombinants from North India

scientific article

Genetic and functional characterization of human immunodeficiency virus type 1 VprC variants from north India: presence of unique recombinants with mosaic genomes from B, C and D subtypes within the open reading frame of Vpr.

scientific article published on 15 July 2009

Genetic architecture of HIV-1 genes circulating in north India & their functional implications

scientific article

Genetic characterization of natural variants of Vpu from HIV-1 infected individuals from Northern India and their impact on virus release and cell death

scientific article

Genetic factors for aids progression: Analyses of HIV-1 resistant genes in India and therapeutic potentials of novel catalytic RNA and DNA molecules

scientific article

Global HIV-1 molecular epidemiology with special reference to genetic analysis of HIV-1 subtypes circulating in North India: functional and pathogenic implications of genetic variation.

scientific article published on June 2009

HIV-1 Rev downregulates Tat expression and viral replication via modulation of NAD(P)H:quinine oxidoreductase 1 (NQO1).

scientific article published on 10 June 2015

HIV-1 Tat potently stabilises Mdm2 and enhances viral replication

scientific article

HIV-1 Vpr redirects host ubiquitination pathway

scientific article

HIV-1 VprB and C RNA cleavage by potent 10-23 DNAzymes that also cause reversal of G2 cell cycle arrest mediated by Vpr genes

scientific article published on January 2007

HIV-1 coreceptor tropism in India: increasing proportion of X4-tropism in subtype C strains over two decades

scientific article published on April 2014

Human APOBEC3G-mediated hypermutation is associated with antiretroviral therapy failure in HIV-1 subtype C-infected individuals

scientific article published on 25 February 2013

Hyperactivation of mammalian target of rapamycin complex 1 by HIV-1 is necessary for virion production and latent viral reactivation

scientific article published on 04 October 2016

Identification of cleavage sites in the HIV-1 TAR RNA by 10-23 and 8-17 catalytic motif containing DNA enzymes.

scientific article

Immunogenicity and efficacy of single antigen Gp63, polytope and polytopeHSP70 DNA vaccines against visceral Leishmaniasis in experimental mouse model

scientific article

Impact of Genetic Variations in HIV-1 Tat on LTR-Mediated Transcription via TAR RNA Interaction

scientific article

In silico Analyses of Subtype Specific HIV-1 Tat-TAR RNA Interaction Reveals the Structural Determinants for Viral Activity

scientific article published on 08 August 2017

In vitro selected RNA-cleaving DNA enzymes from combinatorial libraries

scientific article published in January 2004

Inhibition of HIV-1 by lentiviral vector-transduced siRNAs in T lymphocytes differentiated in SCID-hu mice and CD34+ progenitor cell-derived macrophages

scientific article

Inhibition of HIV-1 gene expression by novel DNA enzymes targeted to cleave HIV-1 TAR RNA: potential effectiveness against all HIV-1 isolates

scientific article

Inhibition of β-TrcP-dependent ubiquitination of p53 by HIV-1 Vpu promotes p53-mediated apoptosis in human T cells

scientific article published on 26 April 2011

Injecting drug users in Bangladesh: prevalence of syphilis, hepatitis, HIV and HIV subtypes

article

Lentiviral transduction of Tar Decoy and CCR5 ribozyme into CD34+ progenitor cells and derivation of HIV-1 resistant T cells and macrophages

scientific article

Molecular and genetic characterization of natural HIV-1 Tat Exon-1 variants from North India and their functional implications

scientific article published on 23 January 2014

Molecular epidemiology of HIV-1 subtypes in India: origin and evolutionary history of the predominant subtype C.

scientific article

Multitarget ribozyme against the S1 genome segment of reovirus possesses novel cleavage activities and is more efficacious than its constituent mono-ribozymes.

scientific article published in July 2002

Novel HIV-1 long terminal repeat (LTR) sequences of subtype B and mosaic intersubtype B/C recombinants in North India

scientific article published on 26 September 2008

Possible role of superantigens in inducing autoimmunity in pemphigus patients

scientific article published on 18 July 2011

Potent inhibition of HIV-1 gene expression and TAT-mediated apoptosis in human T cells by novel mono- and multitarget anti-TAT/Rev/Env ribozymes and a general purpose RNA-cleaving DNA-enzyme

scientific article published on 8 June 2006

Potent inhibition of influenza virus replication with novel siRNA-chimeric-ribozyme constructs

scientific article

Potent knock down of HIV-1 replication by targeting HIV-1 Tat/Rev RNA sequences synergistically with catalytic RNA and DNA.

scientific article published in January 2007

Potent knockdown of the X RNA of hepatitis B by a novel chimeric siRNA-ribozyme construct and modulation of intracellular target RNA by selectively disabled mutants

scientific article

Potent suppression of HIV type 1 infection by a short hairpin anti-CXCR4 siRNA.

scientific article published on August 2003

Proteasomal Degradation Machinery: Favorite Target of HIV-1 Proteins

article

Risk for HIV-1 infection is not associated with Repeat-Region polymorphism in the DC-SIGN neck domain and Novel Genetic DC-SIGN Variants among North Indians

article

Role of RNA interference (RNAi) in dengue virus replication and identification of NS4B as an RNAi suppressor

scientific article published on 05 June 2013

Sequence-specific cleavage activities of DNA enzymes targeted against HIV-1 Gag and Nef regions

scientific article

Sequence-specific cleavage of hepatitis C virus RNA by DNAzymes: inhibition of viral RNA translation and replication

scientific article

Sequence-specific cleavage of hepatitis X RNA in cis and trans by novel monotarget and multitarget hammerhead motif-containing ribozymes.

scientific article published on January 2004

Serum deprivation/starvation leads to reactivation of HIV-1 in latently infected monocytes via activating ERK/JNK pathway

scientific article published in Scientific Reports

Suppressor of Cytokine Signaling 3 (SOCS3) Degrades p65 and Regulate HIV-1 Replication

article

The 7a accessory protein of severe acute respiratory syndrome coronavirus acts as an RNA silencing suppressor

scientific article

The miRNA miR-34a enhances HIV-1 replication by targeting PNUTS/PPP1R10, which negatively regulates HIV-1 transcriptional complex formation

scientific article published on 17 July 2015

USP7 deubiquitinase controls HIV-1 production by stabilizing Tat protein

scientific article published on 9 March 2017

X Protein of hepatitis B virus potently activates HIV-1 subtype C long terminal repeat promoter: implications for faster spread of HIV-1 subtype C.

scientific article

s8ORF2 protein of infectious salmon anaemia virus is a RNA-silencing suppressor and interacts with Salmon salar Mov10 (SsMov10) of the host RNAi machinery

scientific article published on 7 December 2017

siRNAs, ribozymes and RNA decoys in modeling stem cell-based gene therapy for HIV/AIDS.

scientific article

List of works by Akhil Chandra Banerjea

A conserved matrix epitope based DNA vaccine protects mice against influenza A virus challenge

Arginine rich short linear motif of HIV-1 regulatory proteins inhibits dicer dependent RNA interference

Bispecific short hairpin siRNA constructs targeted to CD4, CXCR4, and CCR5 confer HIV-1 resistance

C-terminal half of HIV-1 Vif C possesses major determinant for APOBEC3G degradation

Characterization of natural HIV-1 Tat and Vpr variants from Northern India

Correction: HIV-1 Tat potently stabilises Mdm2 and enhances viral replication

Cross-protective effect of antisense oligonucleotide developed against the common 3' NCR of influenza A virus genome

Curcumin inhibits HIV-1 by promoting Tat protein degradation

DNA-enzyme-mediated cleavage of human immunodeficiency virus type 1 Gag RNA is significantly augmented by antisense-DNA molecules targeted to hybridize close to the cleavage site

Dengue NS3, an RNAi suppressor, modulates the human miRNA pathways through its interacting partner

Design, Synthesis, and Biological Evaluation of 1,2-Dihydroisoquinolines as HIV-1 Integrase Inhibitors

Diversity of HIV type 1 long terminal repeat (LTR) sequences following mother-to-child transmission in North India

Effect of nasal immunization with protective antigen of Bacillus anthracis on protective immune response against anthrax toxin

Effect on HIV-1 gene expression, Tat-Vpr interaction and cell apoptosis by natural variants of HIV-1 Tat exon 1 and Vpr from Northern India

Functional analysis of HIV-1 subtypes B and C HIV-1 Tat exons and RGD/QGD motifs with respect to Tat-mediated transactivation and apoptosis

Functional characterization of HIV-1 Tat exon-1 variants from North India and their implications on HIV-1 transactivation and TAR interaction

Genetic analysis of HIV-1 Circulating Recombinant Form 02_AG, B and C subtype-specific envelope sequences from Northern India and their predicted co-receptor usage

Genetic and Functional Characterization of HIV-1 Vpu from HIV-1-Infected North Indian Population

Genetic and functional analysis of HIV-1 Rev Responsive Element (RRE) sequences from North-India

Genetic and functional characterization of HIV-1 Vif on APOBEC3G degradation: First report of emergence of B/C recombinants from North India

Genetic and functional characterization of human immunodeficiency virus type 1 VprC variants from north India: presence of unique recombinants with mosaic genomes from B, C and D subtypes within the open reading frame of Vpr.

Genetic architecture of HIV-1 genes circulating in north India & their functional implications

Genetic characterization of natural variants of Vpu from HIV-1 infected individuals from Northern India and their impact on virus release and cell death

Genetic factors for aids progression: Analyses of HIV-1 resistant genes in India and therapeutic potentials of novel catalytic RNA and DNA molecules

Global HIV-1 molecular epidemiology with special reference to genetic analysis of HIV-1 subtypes circulating in North India: functional and pathogenic implications of genetic variation.

HIV-1 Rev downregulates Tat expression and viral replication via modulation of NAD(P)H:quinine oxidoreductase 1 (NQO1).

HIV-1 Tat potently stabilises Mdm2 and enhances viral replication

HIV-1 Vpr redirects host ubiquitination pathway

HIV-1 VprB and C RNA cleavage by potent 10-23 DNAzymes that also cause reversal of G2 cell cycle arrest mediated by Vpr genes

HIV-1 coreceptor tropism in India: increasing proportion of X4-tropism in subtype C strains over two decades

Human APOBEC3G-mediated hypermutation is associated with antiretroviral therapy failure in HIV-1 subtype C-infected individuals

Hyperactivation of mammalian target of rapamycin complex 1 by HIV-1 is necessary for virion production and latent viral reactivation

Identification of cleavage sites in the HIV-1 TAR RNA by 10-23 and 8-17 catalytic motif containing DNA enzymes.

Immunogenicity and efficacy of single antigen Gp63, polytope and polytopeHSP70 DNA vaccines against visceral Leishmaniasis in experimental mouse model

Impact of Genetic Variations in HIV-1 Tat on LTR-Mediated Transcription via TAR RNA Interaction

In silico Analyses of Subtype Specific HIV-1 Tat-TAR RNA Interaction Reveals the Structural Determinants for Viral Activity

In vitro selected RNA-cleaving DNA enzymes from combinatorial libraries

Inhibition of HIV-1 by lentiviral vector-transduced siRNAs in T lymphocytes differentiated in SCID-hu mice and CD34+ progenitor cell-derived macrophages

Inhibition of HIV-1 gene expression by novel DNA enzymes targeted to cleave HIV-1 TAR RNA: potential effectiveness against all HIV-1 isolates

Inhibition of β-TrcP-dependent ubiquitination of p53 by HIV-1 Vpu promotes p53-mediated apoptosis in human T cells

Injecting drug users in Bangladesh: prevalence of syphilis, hepatitis, HIV and HIV subtypes

Lentiviral transduction of Tar Decoy and CCR5 ribozyme into CD34+ progenitor cells and derivation of HIV-1 resistant T cells and macrophages

Molecular and genetic characterization of natural HIV-1 Tat Exon-1 variants from North India and their functional implications

Molecular epidemiology of HIV-1 subtypes in India: origin and evolutionary history of the predominant subtype C.

Multitarget ribozyme against the S1 genome segment of reovirus possesses novel cleavage activities and is more efficacious than its constituent mono-ribozymes.

Novel HIV-1 long terminal repeat (LTR) sequences of subtype B and mosaic intersubtype B/C recombinants in North India

Possible role of superantigens in inducing autoimmunity in pemphigus patients

Potent inhibition of HIV-1 gene expression and TAT-mediated apoptosis in human T cells by novel mono- and multitarget anti-TAT/Rev/Env ribozymes and a general purpose RNA-cleaving DNA-enzyme

Potent inhibition of influenza virus replication with novel siRNA-chimeric-ribozyme constructs

Potent knock down of HIV-1 replication by targeting HIV-1 Tat/Rev RNA sequences synergistically with catalytic RNA and DNA.

Potent knockdown of the X RNA of hepatitis B by a novel chimeric siRNA-ribozyme construct and modulation of intracellular target RNA by selectively disabled mutants

Potent suppression of HIV type 1 infection by a short hairpin anti-CXCR4 siRNA.

Proteasomal Degradation Machinery: Favorite Target of HIV-1 Proteins

Risk for HIV-1 infection is not associated with Repeat-Region polymorphism in the DC-SIGN neck domain and Novel Genetic DC-SIGN Variants among North Indians

Role of RNA interference (RNAi) in dengue virus replication and identification of NS4B as an RNAi suppressor

Sequence-specific cleavage activities of DNA enzymes targeted against HIV-1 Gag and Nef regions

Sequence-specific cleavage of hepatitis C virus RNA by DNAzymes: inhibition of viral RNA translation and replication

Sequence-specific cleavage of hepatitis X RNA in cis and trans by novel monotarget and multitarget hammerhead motif-containing ribozymes.

Serum deprivation/starvation leads to reactivation of HIV-1 in latently infected monocytes via activating ERK/JNK pathway

Suppressor of Cytokine Signaling 3 (SOCS3) Degrades p65 and Regulate HIV-1 Replication

The 7a accessory protein of severe acute respiratory syndrome coronavirus acts as an RNA silencing suppressor

The miRNA miR-34a enhances HIV-1 replication by targeting PNUTS/PPP1R10, which negatively regulates HIV-1 transcriptional complex formation

USP7 deubiquitinase controls HIV-1 production by stabilizing Tat protein

X Protein of hepatitis B virus potently activates HIV-1 subtype C long terminal repeat promoter: implications for faster spread of HIV-1 subtype C.

s8ORF2 protein of infectious salmon anaemia virus is a RNA-silencing suppressor and interacts with Salmon salar Mov10 (SsMov10) of the host RNAi machinery

siRNAs, ribozymes and RNA decoys in modeling stem cell-based gene therapy for HIV/AIDS.