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List of works by Brett S. Phinney

A Cysteine-Rich Protein Kinase Associates with a Membrane Immune Complex and the Cysteine Residues Are Required for Cell Death

scientific article published on 16 November 2016

A Functional Link Between NAD+ Homeostasis and N-terminal Protein Acetylation in Saccharomyces cerevisiae.

scientific article published on 9 January 2018

A comparison of proteomic, genomic, and osteological methods of archaeological sex estimation

scientific article published on 17 July 2020

A label-free differential quantitative mass spectrometry method for the characterization and identification of protein changes during citrus fruit development.

scientific article

ABRF Proteome Informatics Research Group (iPRG) 2015 Study: Detection of Differentially Abundant Proteins in Label-Free Quantitative LC-MS/MS Experiments

scientific article published on 19 December 2016

ATG9A protects the plasma membrane from programmed and incidental permeabilization

scientific article published on 12 July 2021

Absolute Quantification of Human Milk Caseins and the Whey/Casein Ratio during the First Year of Lactation.

scientific article published on 19 September 2017

Age-Related Changes in Hair Shaft Protein Profiling and Genetically Variant Peptides

scientific article published on 22 May 2020

An experimental strategy for quantitative analysis of the humoral immune response to prostate cancer antigens using natural protein microarrays

scientific article published on 19 April 2007

Analysis of the pumpkin phloem proteome provides insights into angiosperm sieve tube function.

scientific article published on 20 October 2008

Anopheles stephensi p38 MAPK signaling regulates innate immunity and bioenergetics during Plasmodium falciparum infection

scientific article

AtTRAPPC11/ROG2: A Role for TRAPPs in Maintenance of the Plant Trans-Golgi Network/Early Endosome Organization and Function

scientific article published on 07 June 2019

Biochemical and biomechanical properties of the pacemaking sinoatrial node extracellular matrix are distinct from contractile left ventricular matrix.

scientific article published on 21 September 2017

CaMKII Phosphorylation of Na(V)1.5: Novel in Vitro Sites Identified by Mass Spectrometry and Reduced S516 Phosphorylation in Human Heart Failure

scientific article published on 13 April 2015

Comparative Proteomic Analysis of Walnut (<i>Juglans regia</i> L.) Pellicle Tissues Reveals the Regulation of Nut Quality Attributes

scientific article published on 27 November 2020

Comparative Proteomics of Human and Macaque Milk Reveals Species-Specific Nutrition during Postnatal Development

scientific article published on 6 April 2015

Comparison of protein expression levels and proteomically-inferred genotypes using human hair from different body sites

scientific article published on 11 March 2019

Corneocyte proteomics: Applications to skin biology and dermatology

scientific article published on 01 August 2018

Cornification of nail keratinocytes requires autophagy for bulk degradation of intracellular proteins while sparing components of the cytoskeleton

scientific article published on 01 February 2019

Cryptococcus neoformans promotes its transmigration into the central nervous system by inducing molecular and cellular changes in brain endothelial cells

scientific article published on 17 June 2013

Deep Learning Neural Network Prediction Method Improves Proteome Profiling of Vascular Sap of Grapevines during Pierce's Disease Development

scientific article published on 01 September 2020

Defective glycosylation of calsequestrin in heart failure

scientific article published in August 2004

Determining the overall merit of protein identification data sets: rho-diagrams and rho-scores

scientific article

Dexamethasone Stiffens Trabecular Meshwork, Trabecular Meshwork Cells, and Matrix

scientific article published in July 2015

Differentiating inbred mouse strains from each other and those with single gene mutations using hair proteomics

scientific article

Distinguishing ichthyoses by protein profiling

scientific article (publication date: 2013)

Enhancing peptide ligand binding to vascular endothelial growth factor by covalent bond formation.

scientific article

Extracellular glycosylphosphatidylinositol-anchored mannoproteins and proteases of Cryptococcus neoformans

scientific article

FLOWERING LOCUS T protein may act as the long-distance florigenic signal in the cucurbits.

scientific article

Galectin-3 Coordinates a Cellular System for Lysosomal Repair and Removal

scientific article published on 05 December 2019

Galectins Control mTOR in Response to Endomembrane Damage

scientific article published in April 2018

Galectins control MTOR and AMPK in response to lysosomal damage to induce autophagy

scientific article published on 05 November 2018

Gender-specific changes in energy metabolism and protein degradation as major pathways affected in livers of mice treated with ibuprofen

scientific article published on 25 February 2020

Gene expression profiling in pachyonychia congenita skin

scientific article

Glaucomatous cell derived matrices differentially modulate non-glaucomatous trabecular meshwork cellular behavior.

scientific article published on 7 March 2018

Global analysis of protein palmitoylation in yeast

scientific article

Glycoproteomic Analysis of Malignant Ovarian Cancer Ascites Fluid Identifies Unusual Glycopeptides.

scientific article published on 8 August 2016

Gram-negative bacterial molecules associate with Alzheimer disease pathology

scientific article

Human Keratinocyte Responses to Woodsmoke Chemicals

scientific article published in 2024

Human hair shaft proteomic profiling: individual differences, site specificity and cuticle analysis

scientific article

Human stratum corneum proteomics reveals cross-linking of a broad spectrum of proteins in cornified envelopes

scientific article published on 01 May 2019

Identification and functional analysis of in vivo phosphorylation sites of the Arabidopsis BRASSINOSTEROID-INSENSITIVE1 receptor kinase

scientific article published on 13 May 2005

Identification of in vivo phosphorylation sites of MLK3 by mass spectrometry and phosphopeptide mapping

scientific article

In vivo digestomics of milk proteins in human milk and infant formula using a suckling rat pup model.

scientific article published on 12 December 2016

In vivo multiplex quantitative analysis of 3 forms of alpha melanocyte stimulating hormone in pituitary of prolyl endopeptidase deficient mice

scientific article published on 2 June 2009

Integrated Metabolomics and Proteomics Highlight Altered Nicotinamide- and Polyamine Pathways in Lung Adenocarcinoma

scientific article published on 3 January 2017

Interaction of Arabidopsis BRASSINOSTEROID-INSENSITIVE 1 receptor kinase with a homolog of mammalian TGF-beta receptor interacting protein.

scientific article published in July 2005

Interlaboratory studies and initiatives developing standards for proteomics

scientific article published on 19 February 2013

Jasmonate-inducible plant enzymes degrade essential amino acids in the herbivore midgut

scientific article

Label-free shotgun proteomics and metabolite analysis reveal a significant metabolic shift during citrus fruit development

scientific article

Lactobacillus casei Low-Temperature, Dairy-Associated Proteome Promotes Persistence in the Mammalian Digestive Tract

scientific article published on 24 July 2015

MERIT, a cellular system coordinating lysosomal repair, removal and replacement

scientific article published on 10 June 2020

MK2 Regulates Macrophage Chemokine Activity and Recruitment to Promote Colon Tumor Growth

scientific article published on 21 September 2018

Mitochondrial proteome remodeling in ischemic heart failure

scientific article

N-terminal protein acetylation by NatB modulates the levels of Nmnats, the NAD+ biosynthetic enzymes in Saccharomyces cerevisiae

scientific article published on 16 April 2020

Omega-6 and omega-3 oxylipins are implicated in soybean oil-induced obesity in mice

scientific article published on 2 October 2017

Optimal processing for proteomic genotyping of single human hairs

scientific article published on 25 May 2020

Phosphorylation and activation of the plasma membrane Na+/H+ exchanger (NHE1) during osmotic cell shrinkage

scientific article

Physiological profile of undifferentiated bovine blastocyst-derived trophoblasts

scientific article published on 01 May 2019

Prioritization of metabolic genes as novel therapeutic targets in estrogen-receptor negative breast tumors using multi-omics data and text mining

article

Profiling of proteins secreted in the bovine oviduct reveals diverse functions of this luminal microenvironment.

scientific article

Protein changes in the albedo of citrus fruits on postharvesting storage.

scientific article published on 3 October 2007

Protein variations in Listeria monocytogenes exposed to sodium lactate, sodium diacetate, and their combination.

scientific article

Proteome Analysis of Walnut Bacterial Blight Disease

scientific article published on 09 October 2020

Proteome and metabolome analyses reveal differential responses in tomato -Verticillium dahliae-interactions

scientific article published on 16 July 2019

Proteomes of Lactobacillus delbrueckii subsp. bulgaricus LBB.B5 Incubated in Milk at Optimal and Low Temperatures.

scientific article published on 19 September 2017

Proteomic Analysis of Loricrin Knockout Mouse Epidermis

scientific article published on 15 July 2016

Proteomic analysis of hair shafts from monozygotic twins: Expression profiles and genetically variant peptides.

scientific article published on 22 May 2017

Proteomic analysis of human keratinocyte response to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) exposure ⬇️

scientific article

Proteomic analysis of human nail plate.

scientific article

Proteomic characterization of a triton-insoluble fraction from chloroplasts defines a novel group of proteins associated with macromolecular structures

scientific article published on March 2005

Proteomic characterization of human milk fat globule membrane proteins during a 12 month lactation period.

scientific article published on 29 June 2011

Proteomic characterization of human milk whey proteins during a twelve-month lactation period

scientific article published in March 2011

Proteomic characterization of specific minor proteins in the human milk casein fraction

scientific article published on 15 November 2011

Proteomic genotyping of fingermark donors with genetically variant peptides

scientific article published on 28 May 2019

Proteomic manifestations of genetic defects in autosomal recessive congenital ichthyosis

scientific article published on 10 April 2019

Proteomic profiling of Pachyonychia congenita plantar callus

scientific article

Proteomic profiling of lung adenocarcinoma indicates heightened DNA repair, antioxidant mechanisms and identifies LASP1 as a potential negative predictor of survival

scientific article published on 27 October 2016

Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis

scientific article published in July 2003

Psychosocial Pathways Linking Adverse Childhood Experiences to Mental Health in Recently Deployed Canadian Military Service Members

scientific article published on 8 March 2016

Quantitative proteomics reveals dynamic changes in the plasma membrane during Arabidopsis immune signaling

scientific article published on 3 January 2012

REVEILLE8 and PSEUDO-REPONSE REGULATOR5 form a negative feedback loop within the Arabidopsis circadian clock

scientific article

Reanalysis of Tyrannosaurus rex Mass Spectra

scientific article (publication date: September 2009)

Shotgun cross-linking analysis for studying quaternary and tertiary protein structures

scientific article

Shotgun proteomic analysis unveils survival and detoxification strategies by Caulobacter crescentus during exposure to uranium, chromium, and cadmium

scientific article published on 7 March 2014

Sindbis virus glycoprotein E1 is divided into two discrete domains at amino acid 129 by disulfide bridge connections.

scientific article

Sustained activation of Akt elicits mitochondrial dysfunction to block Plasmodium falciparum infection in the mosquito host

scientific article

The 2012/2013 ABRF Proteomic Research Group Study: Assessing Longitudinal Intralaboratory Variability in Routine Peptide Liquid Chromatography Tandem Mass Spectrometry Analyses

scientific article published on 4 October 2015

The Association of Biomolecular Resource Facilities Proteomics Research Group 2006 study: relative protein quantitation

scientific article published on 18 May 2007

The Metalloprotease, Mpr1, Engages AnnexinA2 to Promote the Transcytosis of Fungal Cells across the Blood-Brain Barrier

scientific article

The Secreted Protease PrtA Controls Cell Growth, Biofilm Formation and Pathogenicity in Xylella fastidiosa

scientific article published on 5 August 2016

The citrus fruit proteome: insights into citrus fruit metabolism

scientific article published on 31 May 2007

The human colostrum whey proteome is altered in gestational diabetes mellitus

scientific article

The significance of protein maturation by plastidic type I signal peptidase 1 for thylakoid development in Arabidopsis chloroplasts

scientific article published on 22 January 2010

The surface conformation of Sindbis virus glycoproteins E1 and E2 at neutral and low pH, as determined by mass spectrometry-based mapping

scientific article

Transforming Growth Factor Beta 3 Modifies Mechanics and Composition of Extracellular Matrix Deposited by Human Trabecular Meshwork Cells

scientific article published on 08 January 2015

Using LC-MS Based Methods for Testing the Digestibility of a Nonpurified Transgenic Membrane Protein in Simulated Gastric Fluid.

scientific article published on 3 June 2016

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