List of works - Filip V. Toukach

Bacterial Carbohydrate Structure Database 3: Principles and Realization ⬇️

scientific article published on December 14, 2010

Bacterial, plant, and fungal carbohydrate structure databases: daily usage.

scientific article published on January 2015

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains

scientific article (publication date: 5 February 2014)

CSDB_GT: a new curated database on glycosyltransferases.

scientific article

Carbohydrate Structure Database: tools for statistical analysis of bacterial, plant and fungal glycomes.

scientific article

Carbohydrate structure database merged from bacterial, archaeal, plant and fungal parts

scientific article

Carbohydrate structure generalization scheme for database-driven simulation of experimental observables, such as NMR chemical shifts

scientific article

Comparison of Methods for Bulk Automated Simulation of Glycosidic Bond Conformations

scientific article published on 15 October 2020

Computer-assisted structural analysis of regular glycopolymers on the basis of 13C NMR data.

scientific article

Critical Analysis of CCSD Data Quality ⬇️

scientific article published on October 12, 2012

Expanding CSDB_GT glycosyltransferase database with Escherichia coli

scientific article published on 01 April 2019

Expansion of coverage of Carbohydrate Structure Database (CSDB).

scientific article

GRASS: semi-automated NMR-based structure elucidation of saccharides

scientific article published on 28 October 2017

GlycoRDF: an ontology to standardize glycomics data in RDF

scientific article

Glycoinformatics: Bridging Isolated Islands in the Sea of Data

scientific article published on 11 October 2018

Improved Carbohydrate Structure Generalization Scheme for (1)H and (13)C NMR Simulations.

scientific article

Introducing glycomics data into the Semantic Web.

scientific article

New Features of Carbohydrate Structure Database Notation (CSDB Linear), As Compared to Other Carbohydrate Notations

scientific article published on 16 January 2020

New structure for the O-polysaccharide of Providencia alcalifaciens O27 and revised structure for the O-polysaccharide of Providencia stuartii O43

scientific article published on 28 February 2007

New structures of the O-specific polysaccharides of Proteus. 2. Polysaccharides containing O-acetyl groups

scientific article published on 01 February 2002

New structures of the O-specific polysaccharides of Proteus. 3. Polysaccharides containing non-carbohydrate organic acids

scientific article published in April 2003

New structures of the O-specific polysaccharides of bacteria of the genus Proteus. 1. Phosphate-containing polysaccharides.

scientific article published in February 2002

Production and сharacterization of the exopolysaccharide from strain Paenibacillus polymyxa 2020

scientific article published on 06 July 2021

REStLESS: automated translation of glycan sequences from residue-based notation to SMILES and atomic coordinates

scientific article published on 01 August 2018

Recent advances in computational predictions of NMR parameters for the structure elucidation of carbohydrates: methods and limitations.

scientific article

Sharing of worldwide distributed carbohydrate-related digital resources: online connection of the Bacterial Carbohydrate Structure DataBase and GLYCOSCIENCES.de.

scientific article

Simulation of 2D NMR Spectra of Carbohydrates Using GODESS Software

scientific article

Somatic antigens of pseudomonads: structure of the O-specific polysaccharide of the reference strain for Pseudomonas fluorescens (IMV 4125, ATCC 13525, biovar A)

scientific article published on 01 September 1996

Source files of the Carbohydrate Structure Database: the way to sophisticated analysis of natural glycans

publication published on 30 March 2022

Statistical analysis of the Bacterial Carbohydrate Structure Data Base (BCSDB): characteristics and diversity of bacterial carbohydrates in comparison with mammalian glycans

scientific article

Structural and immunochemical studies on the O-specific polysaccharide of Proteus penneri strain 15

scientific article published on 01 January 1997

Structural and serological characterization of the lipopolysaccharide from Proteus penneri 20 and classification of the cross-reacting Proteus penneri strains 10, 16, 18, 20, 32 and 45 in Proteus serogroup O17.

scientific article published in January 2002

Structural and serological relatedness of the O-antigens of Proteus penneri 1 and 4 from a novel Proteus serogroup O72.

scientific article published on January 2002

Structural and serological studies of the O-specific polysaccharide of the bacterium Proteus mirabilis O10 containing L-altruronic acid, a new component of O-antigens

scientific article published on 01 December 1996

Structural and serological studies of the related O-specific polysaccharides of Proteus vulgaris O21 and Proteus mirabilis O48 having oligosaccharide-phosphate repeating units

scientific article published on 01 December 2000

Structural characteristics of water-soluble polysaccharides from Heracleum sosnowskyi Manden.

scientific article

Structural studies of O-specific polysaccharide(s) and biological activity toward plants of the lipopolysaccharide from Azospirillum brasilense SR8

scientific article published on 24 December 2018

Structural studies of arabinan-rich pectic polysaccharides from Abies sibirica L. Biological activity of pectins of A. sibirica

scientific article published on 29 July 2014

Structure and gene cluster of the O-polysaccharide of Yersinia rohdei H274-36/78

article

Structure elucidation and gene cluster characterization of the O-antigen of Yersinia kristensenii С-134

scientific article published on 06 June 2019

Structure of a 2-aminoethyl phosphate-containing O-specific polysaccharide of Proteus penneri 63 from a new serogroup O68

scientific article published on 01 January 2000

Structure of a new acidic O-antigen of Proteus vulgaris O22 containing O-acetylated 3-acetamido-3,6-dideoxy-D-glucose

scientific article published on 01 May 1999

Structure of a new neutral O-specific polysaccharide of Proteus penneri 34

scientific article published on 01 November 1998

Structure of a phosphoethanolamine-containing O-polysaccharide of Citrobacter freundii strain PCM 1443 from serogroup O39 and its relatedness to the Klebsiella pneumoniae O1 polysaccharide.

scientific article published on 26 March 2008

Structure of the O-polysaccharide and classification of Proteus mirabilis strain G1 in Proteus serogroup O3.

scientific article published in March 2002

Structure of the O-polysaccharide and serological cross-reactivity of the lipopolysaccharide of Providencia alcalifaciens O32 containing N-acetylisomuramic acid.

scientific article published on 3 December 2006

Structure of the O-polysaccharide from the lipopolysaccharide of Providencia alcalifaciens O29

scientific article published on 21 April 2006

Structure of the O-polysaccharide of Proteus vulgaris O44: a new O-antigen that contains an amide of D-glucuronic acid with L-alanine.

scientific article

Structure of the O-polysaccharide of Providencia alcalifaciens O8 containing (2S,4R)-2,4-dihydroxypentanoic acid, a new non-sugar component of bacterial glycans.

scientific article

Structure of the O-polysaccharide of Providencia stuartii O49.

scientific article

Structure of the O-specific polysaccharide of Hafnia alvei PCM 1222 containing 2-aminoethyl phosphate

scientific article published on 01 December 1996

Structure of the O-specific polysaccharide of Proteus mirabilis D52 and typing of this strain to Proteus serogroup O33.

scientific article published in August 2001

Structure of the O-specific polysaccharide of Proteus mirabilis O16 containing ethanolamine phosphate and ribitol phosphate.

scientific article published in March 2001

Structure of the O-specific polysaccharide of Proteus penneri 103 containing ribitol and 2-aminoethanol phosphates.

scientific article published in September 2002

Structure of the O-specific polysaccharide of Proteus penneri 71 and classification of cross-reactive P. penneri strains to a new proposed serogroup O64

scientific article published on 01 February 2000

Structure of the O-specific polysaccharide of a serologically separate strain Proteus penneri 2 from a new proposed serogroup O66.

scientific article published in April 1999

Structures and serology of the O-antigens of Proteus strains classified into serogroup O17 and former serogroup O35.

scientific article

Structures of a unique O-polysaccharide of Edwardsiella tarda PCM 1153 containing an amide of galacturonic acid with 2-aminopropane-1,3-diol and an abequose-containing O-polysaccharide shared by E. tarda PCM 1145, PCM 1151 and PCM 1158.

scientific article

Structures of new acidic O-specific polysaccharides of the bacterium Proteus mirabilis serogroups O26 and O30

scientific article published on 01 May 1996

Structures of the O-antigens of Proteus bacilli belonging to OX group (serogroups O1-O3) used in Weil-Felix test

scientific article published on 01 July 1997

SugarSketcher: Quick and Intuitive Online Glycan Drawing

Symbol Nomenclature for Graphical Representations of Glycans

scientific article

Tertiary Structure of Bacterial Murein: the Scaffold Model ⬇️

scientific article published on June 1, 2003

Tertiary structure of Staphylococcus aureus cell wall murein.

scientific article published on November 2004

The O-polysaccharide from the lipopolysaccharide of Providencia stuartii O44 contains L-quinovose, a 6-deoxy sugar rarely occurring in bacterial polysaccharides

scientific article published in May 2005

The structure of the O-polysaccharide from the lipopolysaccharide of Providencia stuartii O57 containing an amide of D-galacturonic acid with L-alanine.

scientific article

Three-Dimensional Structures of Carbohydrates and Where to Find Them

scientific article published on 18 October 2020

Towards a comprehensive view of the bacterial cell wall

scientific article published on 19 October 2005

Updates to the Symbol Nomenclature for Glycans guidelines

scientific article published on 01 August 2019

List of works by Filip V. Toukach

Bacterial Carbohydrate Structure Database 3: Principles and Realization ⬇️

Bacterial, plant, and fungal carbohydrate structure databases: daily usage.

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains

CSDB_GT: a new curated database on glycosyltransferases.

Carbohydrate Structure Database: tools for statistical analysis of bacterial, plant and fungal glycomes.

Carbohydrate structure database merged from bacterial, archaeal, plant and fungal parts

Carbohydrate structure generalization scheme for database-driven simulation of experimental observables, such as NMR chemical shifts

Comparison of Methods for Bulk Automated Simulation of Glycosidic Bond Conformations

Computer-assisted structural analysis of regular glycopolymers on the basis of 13C NMR data.

Critical Analysis of CCSD Data Quality ⬇️

Expanding CSDB_GT glycosyltransferase database with Escherichia coli

Expansion of coverage of Carbohydrate Structure Database (CSDB).

GRASS: semi-automated NMR-based structure elucidation of saccharides

GlycoRDF: an ontology to standardize glycomics data in RDF

Glycoinformatics: Bridging Isolated Islands in the Sea of Data

Improved Carbohydrate Structure Generalization Scheme for (1)H and (13)C NMR Simulations.

Introducing glycomics data into the Semantic Web.

New Features of Carbohydrate Structure Database Notation (CSDB Linear), As Compared to Other Carbohydrate Notations

New structure for the O-polysaccharide of Providencia alcalifaciens O27 and revised structure for the O-polysaccharide of Providencia stuartii O43

New structures of the O-specific polysaccharides of Proteus. 2. Polysaccharides containing O-acetyl groups

New structures of the O-specific polysaccharides of Proteus. 3. Polysaccharides containing non-carbohydrate organic acids

New structures of the O-specific polysaccharides of bacteria of the genus Proteus. 1. Phosphate-containing polysaccharides.

Production and сharacterization of the exopolysaccharide from strain Paenibacillus polymyxa 2020

REStLESS: automated translation of glycan sequences from residue-based notation to SMILES and atomic coordinates

Recent advances in computational predictions of NMR parameters for the structure elucidation of carbohydrates: methods and limitations.

Sharing of worldwide distributed carbohydrate-related digital resources: online connection of the Bacterial Carbohydrate Structure DataBase and GLYCOSCIENCES.de.

Simulation of 2D NMR Spectra of Carbohydrates Using GODESS Software

Somatic antigens of pseudomonads: structure of the O-specific polysaccharide of the reference strain for Pseudomonas fluorescens (IMV 4125, ATCC 13525, biovar A)

Source files of the Carbohydrate Structure Database: the way to sophisticated analysis of natural glycans

Statistical analysis of the Bacterial Carbohydrate Structure Data Base (BCSDB): characteristics and diversity of bacterial carbohydrates in comparison with mammalian glycans

Structural and immunochemical studies on the O-specific polysaccharide of Proteus penneri strain 15

Structural and serological characterization of the lipopolysaccharide from Proteus penneri 20 and classification of the cross-reacting Proteus penneri strains 10, 16, 18, 20, 32 and 45 in Proteus serogroup O17.

Structural and serological relatedness of the O-antigens of Proteus penneri 1 and 4 from a novel Proteus serogroup O72.

Structural and serological studies of the O-specific polysaccharide of the bacterium Proteus mirabilis O10 containing L-altruronic acid, a new component of O-antigens

Structural and serological studies of the related O-specific polysaccharides of Proteus vulgaris O21 and Proteus mirabilis O48 having oligosaccharide-phosphate repeating units

Structural characteristics of water-soluble polysaccharides from Heracleum sosnowskyi Manden.

Structural studies of O-specific polysaccharide(s) and biological activity toward plants of the lipopolysaccharide from Azospirillum brasilense SR8

Structural studies of arabinan-rich pectic polysaccharides from Abies sibirica L. Biological activity of pectins of A. sibirica

Structure and gene cluster of the O-polysaccharide of Yersinia rohdei H274-36/78

Structure elucidation and gene cluster characterization of the O-antigen of Yersinia kristensenii С-134

Structure of a 2-aminoethyl phosphate-containing O-specific polysaccharide of Proteus penneri 63 from a new serogroup O68

Structure of a new acidic O-antigen of Proteus vulgaris O22 containing O-acetylated 3-acetamido-3,6-dideoxy-D-glucose

Structure of a new neutral O-specific polysaccharide of Proteus penneri 34

Structure of a phosphoethanolamine-containing O-polysaccharide of Citrobacter freundii strain PCM 1443 from serogroup O39 and its relatedness to the Klebsiella pneumoniae O1 polysaccharide.

Structure of the O-polysaccharide and classification of Proteus mirabilis strain G1 in Proteus serogroup O3.

Structure of the O-polysaccharide and serological cross-reactivity of the lipopolysaccharide of Providencia alcalifaciens O32 containing N-acetylisomuramic acid.

Structure of the O-polysaccharide from the lipopolysaccharide of Providencia alcalifaciens O29

Structure of the O-polysaccharide of Proteus vulgaris O44: a new O-antigen that contains an amide of D-glucuronic acid with L-alanine.

Structure of the O-polysaccharide of Providencia alcalifaciens O8 containing (2S,4R)-2,4-dihydroxypentanoic acid, a new non-sugar component of bacterial glycans.

Structure of the O-polysaccharide of Providencia stuartii O49.

Structure of the O-specific polysaccharide of Hafnia alvei PCM 1222 containing 2-aminoethyl phosphate

Structure of the O-specific polysaccharide of Proteus mirabilis D52 and typing of this strain to Proteus serogroup O33.

Structure of the O-specific polysaccharide of Proteus mirabilis O16 containing ethanolamine phosphate and ribitol phosphate.

Structure of the O-specific polysaccharide of Proteus penneri 103 containing ribitol and 2-aminoethanol phosphates.

Structure of the O-specific polysaccharide of Proteus penneri 71 and classification of cross-reactive P. penneri strains to a new proposed serogroup O64

Structure of the O-specific polysaccharide of a serologically separate strain Proteus penneri 2 from a new proposed serogroup O66.

Structures and serology of the O-antigens of Proteus strains classified into serogroup O17 and former serogroup O35.

Structures of a unique O-polysaccharide of Edwardsiella tarda PCM 1153 containing an amide of galacturonic acid with 2-aminopropane-1,3-diol and an abequose-containing O-polysaccharide shared by E. tarda PCM 1145, PCM 1151 and PCM 1158.

Structures of new acidic O-specific polysaccharides of the bacterium Proteus mirabilis serogroups O26 and O30

Structures of the O-antigens of Proteus bacilli belonging to OX group (serogroups O1-O3) used in Weil-Felix test

SugarSketcher: Quick and Intuitive Online Glycan Drawing

Symbol Nomenclature for Graphical Representations of Glycans

Tertiary Structure of Bacterial Murein: the Scaffold Model ⬇️

Tertiary structure of Staphylococcus aureus cell wall murein.

The O-polysaccharide from the lipopolysaccharide of Providencia stuartii O44 contains L-quinovose, a 6-deoxy sugar rarely occurring in bacterial polysaccharides

The structure of the O-polysaccharide from the lipopolysaccharide of Providencia stuartii O57 containing an amide of D-galacturonic acid with L-alanine.

Three-Dimensional Structures of Carbohydrates and Where to Find Them

Towards a comprehensive view of the bacterial cell wall

Updates to the Symbol Nomenclature for Glycans guidelines