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List of works by Flavio Licciulli

A high performance grid-web service framework for the identification of ‘conserved sequence tags’

A platform independent RNA-Seq protocol for the detection of transcriptome complexity

scientific article

A research data management (RDM) community for ELIXIR

scientific article published on 30 September 2024

ASPicDB: a database of annotated transcript and protein variants generated by alternative splicing

scientific article

ASPicDB: a database resource for alternative splicing analysis.

scientific article published on 3 April 2008

Analysis of oligonucleotide AUG start codon context in eukariotic mRNAs.

scientific article published on December 2000

BEAT: Bioinformatics Exon Array Tool to store, analyze and visualize Affymetrix GeneChip Human Exon Array data from disease experiments

scientific article

Combined microRNA and mRNA expression analysis in pediatric multiple sclerosis: an integrated approach to uncover novel pathogenic mechanisms of the disease

scientific article published on 26 October 2017

DNAfan: a software tool for automated extraction and analysis of user-defined sequence regions

article

Gene analogue finder: a GRID solution for finding functionally analogous gene products

scientific article

ITSoneDB: a comprehensive collection of eukaryotic ribosomal RNA Internal Transcribed Spacer 1 (ITS1) sequences

scientific article published on 25 September 2017

Integrated Analysis of microRNA and mRNA Expression Profiles: An Attempt to Disentangle the Complex Interaction Network in Attention Deficit Hyperactivity Disorder

scientific article published on 22 October 2019

MitoDrome: a database of Drosophila melanogaster nuclear genes encoding proteins targeted to the mitochondrion

scientific article published on January 2003

MitoNuc and MitoAln: two related databases of nuclear genes coding for mitochondrial proteins.

scientific article published on January 2000

MitoNuc: a database of nuclear genes coding for mitochondrial proteins. Update 2002.

scientific article published on January 2002

MitoRes: a resource of nuclear-encoded mitochondrial genes and their products in Metazoa

scientific article

Molecular Characterization of Peripheral Extracellular Vesicles in Clinically Isolated Syndrome: Preliminary Suggestions from a Pilot Study.

scientific article published on 18 September 2017

PLMItRNA, a database for higher plant mitochondrial tRNAs and tRNA genes.

scientific article published on January 1999

PLMItRNA, a database for mitochondrial tRNA genes and tRNAs in photosynthetic eukaryotes.

scientific article

PLMItRNA, a database for tRNAs and tRNA genes in plant mitochondria: enlargement and updating.

scientific article published on January 2000

PatSearch: A program for the detection of patterns and structural motifs in nucleotide sequences

scientific article

Reference databases for taxonomic assignment in metagenomics

scientific article

Structural and functional features of eukaryotic mRNA untranslated regions

scientific article

The MitoDrome database annotates and compares the OXPHOS nuclear genes of Drosophila melanogaster, Drosophila pseudoobscura and Anopheles gambiae

scientific article published on 21 July 2006

The mitBASE human dataset structure

scientific article published on January 1998

UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs

scientific article

UTRdb and UTRsite: a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs

scientific article

UTRdb and UTRsite: specialized databases of sequences and functional elements of 5' and 3' untranslated regions of eukaryotic mRNAs. Update 2002.

scientific article published on January 2002

Update of AMmtDB: a database of multi-aligned Metazoa mitochondrial DNA sequences.

scientific article published on January 2002

Update of KEYnet: a gene and protein names database for biosequences functional organisation

scientific article

WoPPER: Web server for Position Related data analysis of gene Expression in Prokaryotes

scientific article

p53FamTaG: a database resource of human p53, p63 and p73 direct target genes combining in silico prediction and microarray data

scientific article