List of works - Numan Oezguen

A "moving metal mechanism" for substrate cleavage by the DNA repair endonuclease APE-1.

scientific article published in July 2007

Allele variants of enterotoxigenic Escherichia coli heat-labile toxin are globally transmitted and associated with colonization factors.

scientific article

Automated assignment and 3D structure calculations using combinations of 2D homonuclear and 3D heteronuclear NOESY spectra

scientific article published on 01 March 2002

Base of the measles virus fusion trimer head receives the signal that triggers membrane fusion

scientific article

Comprehensive 3D-modeling of allergenic proteins and amino acid composition of potential conformational IgE epitopes.

scientific article published on 14 July 2008

Critical roles of Clostridium difficile toxin B enzymatic activities in pathogenesis.

scientific article

Distinct Microbiome-Neuroimmune Signatures Correlate With Functional Abdominal Pain in Children With Autism Spectrum Disorder.

scientific article published on 11 December 2016

Effects of backbone contacts 3' to the abasic site on the cleavage and the product binding by human apurinic/apyrimidinic endonuclease (APE1).

scientific article

GABA-producing Bifidobacterium dentium modulates visceral sensitivity in the intestine ⬇️

scientific article published on 25 July 2016

Host S-nitrosylation inhibits clostridial small molecule-activated glucosylating toxins

scientific article

How cytokines co-occur across asthma patients: from bipartite network analysis to a molecular-based classification

journal article published in 2011

Identification and analysis of conserved sequence motifs in cytochrome P450 family 2. Functional and structural role of a motif 187RFDYKD192 in CYP2B enzymes.

scientific article published on 21 May 2008

Identifying Region-specific Allergy Sensitization Clusters to Optimize Diagnosis and Reduce Costs

scientific article published in 2024

MD simulation and experimental evidence for Mg2+ binding at the b site in human AP endonuclease 1 ⬇️

scientific article published on October 14, 2011

Measles virus blind to its epithelial cell receptor remains virulent in rhesus monkeys but cannot cross the airway epithelium and is not shed

scientific article published on July 2008

Membrane-protein interactions contribute to efficient 27-hydroxylation of cholesterol by mitochondrial cytochrome P450 27A1.

scientific article

Molego-based definition of the architecture and specificity of metal-binding sites

scientific article published in January 2005

NMR solution structure of poliovirus uridylyated peptide linked to the genome (VPgpU)

scientific article

Nearby clusters of hemagglutinin residues sustain SLAM-dependent canine distemper virus entry in peripheral blood mononuclear cells

scientific article published on May 2005

Next-generation probiotics targeting Clostridium difficile through precursor-directed antimicrobial biosynthesis

scientific article

Nuclear trafficking of the HIV-1 pre-integration complex depends on the ADAM10 intracellular domain

scientific article

Regulation of protein-ligand binding affinity by hydrogen bond pairing.

scientific article published on 25 March 2016

Selectively receptor-blind measles viruses: Identification of residues necessary for SLAM- or CD46-induced fusion and their localization on a new hemagglutinin structural model

scientific article published on January 2004

Systems biology analysis of the Clostridioides difficile core-genome contextualizes microenvironmental evolutionary pressures leading to genotypic and phenotypic divergence

scientific article published on 20 October 2020

The disordered C-terminal domain of human DNA glycosylase NEIL1 contributes to its stability via intramolecular interactions

scientific article published on 27 March 2013

The heads of the measles virus attachment protein move to transmit the fusion-triggering signal

scientific article published on 9 January 2011

Total sequence decomposition distinguishes functional modules, "molegos" in apurinic/apyrimidinic endonucleases

scientific article

Using property based sequence motifs and 3D modeling to determine structure and functional regions of proteins.

scientific article

iCircos: visual analytics for translational bioinformatics

conference proceedings item published in 2012

List of works by Numan Oezguen

A "moving metal mechanism" for substrate cleavage by the DNA repair endonuclease APE-1.

Allele variants of enterotoxigenic Escherichia coli heat-labile toxin are globally transmitted and associated with colonization factors.

Automated assignment and 3D structure calculations using combinations of 2D homonuclear and 3D heteronuclear NOESY spectra

Base of the measles virus fusion trimer head receives the signal that triggers membrane fusion

Comprehensive 3D-modeling of allergenic proteins and amino acid composition of potential conformational IgE epitopes.

Critical roles of Clostridium difficile toxin B enzymatic activities in pathogenesis.

Distinct Microbiome-Neuroimmune Signatures Correlate With Functional Abdominal Pain in Children With Autism Spectrum Disorder.

Effects of backbone contacts 3' to the abasic site on the cleavage and the product binding by human apurinic/apyrimidinic endonuclease (APE1).

GABA-producing Bifidobacterium dentium modulates visceral sensitivity in the intestine ⬇️

Host S-nitrosylation inhibits clostridial small molecule-activated glucosylating toxins

How cytokines co-occur across asthma patients: from bipartite network analysis to a molecular-based classification

Identification and analysis of conserved sequence motifs in cytochrome P450 family 2. Functional and structural role of a motif 187RFDYKD192 in CYP2B enzymes.

Identifying Region-specific Allergy Sensitization Clusters to Optimize Diagnosis and Reduce Costs

MD simulation and experimental evidence for Mg2+ binding at the b site in human AP endonuclease 1 ⬇️

Measles virus blind to its epithelial cell receptor remains virulent in rhesus monkeys but cannot cross the airway epithelium and is not shed

Membrane-protein interactions contribute to efficient 27-hydroxylation of cholesterol by mitochondrial cytochrome P450 27A1.

Molego-based definition of the architecture and specificity of metal-binding sites

NMR solution structure of poliovirus uridylyated peptide linked to the genome (VPgpU)

Nearby clusters of hemagglutinin residues sustain SLAM-dependent canine distemper virus entry in peripheral blood mononuclear cells

Next-generation probiotics targeting Clostridium difficile through precursor-directed antimicrobial biosynthesis

Nuclear trafficking of the HIV-1 pre-integration complex depends on the ADAM10 intracellular domain

Regulation of protein-ligand binding affinity by hydrogen bond pairing.

Selectively receptor-blind measles viruses: Identification of residues necessary for SLAM- or CD46-induced fusion and their localization on a new hemagglutinin structural model

Systems biology analysis of the Clostridioides difficile core-genome contextualizes microenvironmental evolutionary pressures leading to genotypic and phenotypic divergence

The disordered C-terminal domain of human DNA glycosylase NEIL1 contributes to its stability via intramolecular interactions

The heads of the measles virus attachment protein move to transmit the fusion-triggering signal

Total sequence decomposition distinguishes functional modules, "molegos" in apurinic/apyrimidinic endonucleases

Using property based sequence motifs and 3D modeling to determine structure and functional regions of proteins.

iCircos: visual analytics for translational bioinformatics