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List of works by Andrea M. Cabibbe

Alarming levels of multidrug-resistant tuberculosis in Ukraine: results from the first national survey.

scientific article published in February 2018

Application of machine learning techniques to tuberculosis drug resistance analysis

scholarly article by Samaneh Kouchaki et al published 21 November 2018 in Bioinformatics

Bedaquiline Phenotypic and Genotypic Susceptibility Testing, Work in Progress!

scientific article

Best approaches to drug-resistance surveillance at the country level

scientific article

Consensus numbering system for the rifampicin resistance-associated rpoB gene mutations in pathogenic mycobacteria.

scientific article published on 21 September 2016

Countrywide implementation of whole genome sequencing: an opportunity to improve tuberculosis management, surveillance and contact tracing in low incidence countries.

scientific article published on 12 April 2018

Deep amplicon sequencing for culture-free prediction of susceptibility or resistance to 13 anti-tuberculous drugs ⬇️

scientific article published on 17 September 2020

Delamanid susceptibility testing of Mycobacterium tuberculosis using the resazurin microtitre assay and the BACTEC™ MGIT™ 960 system

scientific article

Diagnostic Performance of the New Version (v2.0) of GenoType MTBDRsl Assay for Detection of Resistance to Fluoroquinolones and Second-Line Injectable Drugs: a Multicenter Study

scientific article published on 15 July 2015

Evaluation of a novel line probe assay to detect resistance to pyrazinamide, a key drug used for tuberculosis treatment.

scientific article published on 03 June 2017

Exportation of MDR TB to Europe from Setting with Actively Transmitted Persistent Strains in Peru

scientific article published on 01 March 2019

Fluoroquinolone heteroresistance in Mycobacterium tuberculosis: detection by genotypic and phenotypic assays in experimentally mixed populations

scientific article published on 13 August 2019

Genetic sequencing for surveillance of drug resistance in tuberculosis in highly endemic countries: a multi-country population-based surveillance study

scientific article

GenoType MTBDRsl performance on clinical samples with diverse genetic background

scientific article

Genotypic and phenotypic M. tuberculosis resistance: guiding clinicians to prescribe the correct regimens

scientific article published on 28 December 2017

Is sequencing better than phenotypic tests for the detection of pyrazinamide resistance?

scientific article published on 01 June 2018

Lack of association of novel mutation Asp397Gly in aftB gene with ethambutol resistance in clinical isolates of Mycobacterium tuberculosis

scientific article published on 25 January 2019

Low prevalence of fluoroquinolone resistance among patients with tuberculosis in the Philippines: results of a national survey.

scientific article

Mycobacterium alsense sp. nov., a scotochromogenic slow grower isolated from clinical respiratory specimens.

scientific article

Mycobacterium angelicum sp. nov., a non-chromogenic, slow-growing species isolated from fish and related to Mycobacterium szulgai.

scientific article

Mycobacterium celeriflavum sp. nov., a rapidly growing scotochromogenic bacterium isolated from clinical specimens

scientific article

Mycobacterium tuberculosis pyrazinamide resistance determinants: a multicenter study

scientific article

PhyResSE: a Web Tool Delineating Mycobacterium tuberculosis Antibiotic Resistance and Lineage from Whole-Genome Sequencing Data

scientific article

Population-based resistance of Mycobacterium tuberculosis isolates to pyrazinamide and fluoroquinolones: results from a multicountry surveillance project

scientific article published on 07 July 2016

Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing

scientific article published on 26 September 2018

Prevalence and genetic profiles of isoniazid resistance in tuberculosis patients: A multicountry analysis of cross-sectional data

scientific article published on 21 January 2020

Removing the bottleneck in whole genome sequencing of Mycobacterium tuberculosis for rapid drug resistance analysis: a call to action

scientific article

Role of Disputed Mutations in the Gene in Interpretation of Automated Liquid MGIT Culture Results for Rifampin Susceptibility Testing of Mycobacterium tuberculosis

article

Screening of inmates transferred to Spain reveals a Peruvian prison as a reservoir of persistent Mycobacterium tuberculosis MDR strains and mixed infections

scientific article published on 17 February 2020

Use of WGS in Mycobacterium tuberculosis routine diagnosis.

scientific article

Whole genome sequencing of Mycobacterium tuberculosis

scientific article published on 01 November 2018

Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues

scientific article published on 01 September 2019

Whole genome sequencing of multidrug-resistant Mycobacterium tuberculosis isolates collected in the Czech Republic, 2005-2020

scientific article published on 03 May 2022

Whole-Genome Sequencing of Drug-Resistant Mycobacterium tuberculosis Strains, Tunisia, 2012-2016

scientific article published on 01 March 2019

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