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List of works by James David Wasmuth

A transcriptomic analysis of Echinococcus granulosus larval stages: implications for parasite biology and host adaptation

scientific article

Bovine viral diarrhea virus genomic variation within persistently infected cattle.

scientific article published on 3 January 2018

Characterization and comparative analysis of the complete Haemonchus contortus β-tubulin gene family and implications for benzimidazole resistance in strongylid nematodes.

scientific article published on 14 February 2013

Characterization of the β-tubulin gene family in Ascaris lumbricoides and Ascaris suum and its implication for the molecular detection of benzimidazole resistance

scientific article published on 27 September 2021

Comparative genomics of the apicomplexan parasites Toxoplasma gondii and Neospora caninum: Coccidia differing in host range and transmission strategy

scientific article published in 2012

DETECT--a density estimation tool for enzyme classification and its application to Plasmodium falciparum.

scientific article published on 30 May 2010

Does the arthropod microbiota impact the establishment of vector-borne diseases in mammalian hosts?

scientific article

Expanding the view on the evolution of the nematode dauer signalling pathways: refinement through gene gain and pathway co-option

scientific article

Exploring the Gastrointestinal "Nemabiome": Deep Amplicon Sequencing to Quantify the Species Composition of Parasitic Nematode Communities

scientific article

Figmop: a profile HMM to identify genes and bypass troublesome gene models in draft genomes

scientific article

HIV Infection Deregulates Tim-3 Expression on Innate Cells

article

HIV infection deregulates innate immunity to malaria despite combination antiretroviral therapy

scientific article published in January 2013

Horizontal transfer of a retrotransposon between parasitic nematodes and the common shrew.

scientific article published on 30 May 2019

Identification of Two Novel Coccidian Species Shed by California Sea Lions (Zalophus californianus) ⬇️

scientific article published on November 17, 2011

Improved enzyme annotation with EC-specific cutoffs using DETECT v2

scientific article published on 01 October 2018

Integrated Bioinformatic and Targeted Deletion Analyses of the SRS Gene Superfamily Identify SRS29C as a Negative Regulator ofToxoplasmaVirulence ⬇️

scientific article published on November 13, 2012

Intergenic sequence comparison of Escherichia coli isolates reveals lifestyle adaptations but not host specificity.

scientific article published on 9 September 2011

Kablammo: an interactive, web-based BLAST results visualizer.

scientific article published on 5 December 2014

MIPhy: identify and quantify rapidly evolving members of large gene families.

scientific article published on 29 May 2018

Metabolic reconstruction identifies strain-specific regulation of virulence in Toxoplasma gondii.

scientific article

Morphological variability and molecular identification of Uncinaria spp. (Nematoda: Ancylostomatidae) from grizzly and black bears: new species or phenotypic plasticity?

scientific article

NEMBASE4: The nematode transcriptome resource ⬇️

scientific article published on April 21, 2011

Obtaining accurate translations from expressed sequence tags

scientific article published in January 2009

On the Extent and Origins of Genic Novelty in the Phylum Nematoda

scientific article (publication date: 2 July 2008)

Patterns of molecular evolution in Caenorhabditis preclude ancient origins of selfing.

scientific article published on April 2008

Realizing the promise of parasite genomics

scientific article published on July 2014

The VPS33B-binding protein VPS16B is required in megakaryocyte and platelet α-granule biogenesis

scientific article published on 21 September 2012

The genome and transcriptome of Haemonchus contortus, a key model parasite for drug and vaccine discovery

scientific article

The genomes of four tapeworm species reveal adaptations to parasitism

scientific article

The origins of apicomplexan sequence innovation.

scientific article published on 10 April 2009

Unravelling parasitic nematode natural history using population genetics.

scientific article published on 12 August 2013

prot4EST: translating expressed sequence tags from neglected genomes

scientific article

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